RNA–Protein interactions for RNA: ENST00000417717.6

SATB1-204, Transcript of SATB homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene SATB1, Length 4,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-204ENST00000417717 SUPT16HQ9Y5B9 1047 aaKnown RBP13.69□□□□□ -0.22
SATB1-204ENST00000417717 RBM19Q9Y4C8 960 aaKnown RBP13.68□□□□□ -0.22
SATB1-204ENST00000417717 BAZ1AQ9NRL2 1556 aaPredicted RBP13.67□□□□□ -0.22
SATB1-204ENST00000417717 MIER1Q8N108 512 aa13.67□□□□□ -0.22
SATB1-204ENST00000417717 PTMAP06454 111 aaKnown RBP13.67□□□□□ -0.22
SATB1-204ENST00000417717 A0A0U1RQG5 324 aaPredicted RBP13.66□□□□□ -0.22
SATB1-204ENST00000417717 LAS1LQ9Y4W2 734 aaKnown RBP13.62□□□□□ -0.23
SATB1-204ENST00000417717 MSNP26038 577 aaKnown RBP13.61□□□□□ -0.23
SATB1-204ENST00000417717 TRIM52Q96A61 297 aa13.59□□□□□ -0.23
SATB1-204ENST00000417717 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.59□□□□□ -0.23
SATB1-204ENST00000417717 CHAF1AQ13111 956 aaPredicted RBP13.58□□□□□ -0.23
SATB1-204ENST00000417717 TSHZ2Q9NRE2 1034 aa13.57□□□□□ -0.24
SATB1-204ENST00000417717 PPP4R2Q9NY27 417 aa13.55□□□□□ -0.24
SATB1-204ENST00000417717 ARID4BQ4LE39 1312 aaPredicted RBP13.54□□□□□ -0.24
SATB1-204ENST00000417717 APPP05067 770 aa13.51□□□□□ -0.25
SATB1-204ENST00000417717 CALRP27797 417 aaKnown RBP13.51□□□□□ -0.25
SATB1-204ENST00000417717 IRX6P78412 446 aaPredicted RBP13.51□□□□□ -0.25
SATB1-204ENST00000417717 ANO8Q9HCE9 1232 aaPredicted RBP13.51□□□□□ -0.25
SATB1-204ENST00000417717 USP35Q9P2H5 1018 aa13.51□□□□□ -0.25
SATB1-204ENST00000417717 CECR2Q9BXF3 1484 aa13.48□□□□□ -0.25
SATB1-204ENST00000417717 DDX10Q13206 875 aaKnown RBP13.48□□□□□ -0.25
SATB1-204ENST00000417717 FAM9BQ8IZU0 186 aa13.45□□□□□ -0.26
SATB1-204ENST00000417717 UBE2Q2Q8WVN8 375 aa13.43□□□□□ -0.26
SATB1-204ENST00000417717 MROH2BQ7Z745 1585 aa13.43□□□□□ -0.26
SATB1-204ENST00000417717 SLC4A1APQ9BWU0 796 aaKnown RBP13.43□□□□□ -0.26
SATB1-204ENST00000417717 TIMELESSQ9UNS1 1208 aa13.41□□□□□ -0.26
SATB1-204ENST00000417717 PDE4CQ08493 712 aa13.4□□□□□ -0.26
SATB1-204ENST00000417717 NRDCO43847 1150 aa13.39□□□□□ -0.27
SATB1-204ENST00000417717 BAZ1BQ9UIG0 1483 aaKnown RBP13.38□□□□□ -0.27
SATB1-204ENST00000417717 SMARCA2P51531 1590 aa13.37□□□□□ -0.27
SATB1-204ENST00000417717 GOLGA6L3A6NEY3 463 aa13.36□□□□□ -0.27
SATB1-204ENST00000417717 ARID3AQ99856 593 aa13.36□□□□□ -0.27
SATB1-204ENST00000417717 EEA1Q15075 1411 aa13.36□□□□□ -0.27
SATB1-204ENST00000417717 MAP7D2Q96T17 732 aa13.35□□□□□ -0.27
SATB1-204ENST00000417717 FAM50AQ14320 339 aaKnown RBP13.35□□□□□ -0.27
SATB1-204ENST00000417717 KIAA2012Q0VF49 1180 aa13.35□□□□□ -0.27
SATB1-204ENST00000417717 MRS2Q9HD23 443 aa13.35□□□□□ -0.27
SATB1-204ENST00000417717 TOP2AP11388 1531 aaKnown RBP13.34□□□□□ -0.27
SATB1-204ENST00000417717 IPO9Q96P70 1041 aaKnown RBP13.34□□□□□ -0.27
SATB1-204ENST00000417717 GOLGA6L6A8MZA4 724 aa13.34□□□□□ -0.27
SATB1-204ENST00000417717 SMARCA4P51532 1647 aa13.32□□□□□ -0.28
SATB1-204ENST00000417717 SALL2Q9Y467 1007 aaPredicted RBP13.32□□□□□ -0.28
SATB1-204ENST00000417717 MTERF4Q7Z6M4 381 aaKnown RBP13.31□□□□□ -0.28
SATB1-204ENST00000417717 TMC1Q8TDI8 760 aa13.31□□□□□ -0.28
SATB1-204ENST00000417717 FANCIQ9NVI1 1328 aa13.31□□□□□ -0.28
SATB1-204ENST00000417717 MYH16Q9H6N6 1097 aa13.3□□□□□ -0.28
SATB1-204ENST00000417717 GSE1Q14687 1217 aa13.3□□□□□ -0.28
SATB1-204ENST00000417717 SETQ01105 290 aaPredicted RBP13.29□□□□□ -0.28
SATB1-204ENST00000417717 ZRSR1Q15695 479 aaKnown RBP13.28□□□□□ -0.28
SATB1-204ENST00000417717 GOLGA6L1Q8N7Z2 621 aa13.28□□□□□ -0.28
SATB1-204ENST00000417717 ZNF771Q7L3S4 317 aaPredicted RBP13.27□□□□□ -0.29
SATB1-204ENST00000417717 PLCB2Q00722 1185 aa13.26□□□□□ -0.29
SATB1-204ENST00000417717 TONSLQ96HA7 1378 aa13.24□□□□□ -0.29
SATB1-204ENST00000417717 B4GALNT3Q6L9W6 998 aa13.24□□□□□ -0.29
SATB1-204ENST00000417717 RRP9O43818 475 aaKnown RBP13.23□□□□□ -0.29
SATB1-204ENST00000417717 WIZO95785 1651 aa13.23□□□□□ -0.29
SATB1-204ENST00000417717 CCDC88BA6NC98 1476 aa13.22□□□□□ -0.29
SATB1-204ENST00000417717 WRNQ14191 1432 aaPredicted RBP eCLIP13.21□□□□□ -0.3
SATB1-204ENST00000417717 GBP4Q96PP9 640 aa13.2□□□□□ -0.3
SATB1-204ENST00000417717 ATAD2BQ9ULI0 1458 aa13.2□□□□□ -0.3
SATB1-204ENST00000417717 CCDC66A2RUB6 948 aa13.18□□□□□ -0.3
SATB1-204ENST00000417717 TCERG1O14776 1098 aaKnown RBP13.18□□□□□ -0.3
SATB1-204ENST00000417717 HSP90AB1P08238 724 aaKnown RBP13.18□□□□□ -0.3
SATB1-204ENST00000417717 FAM13BQ9NYF5 915 aa13.18□□□□□ -0.3
SATB1-204ENST00000417717 HSCBQ8IWL3 235 aa13.17□□□□□ -0.3
SATB1-204ENST00000417717 TPM2P07951 284 aa13.17□□□□□ -0.3
SATB1-204ENST00000417717 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.16□□□□□ -0.3
SATB1-204ENST00000417717 WDR43Q15061 677 aaKnown RBP eCLIP13.14□□□□□ -0.31
SATB1-204ENST00000417717 NOM1Q5C9Z4 860 aaKnown RBP13.14□□□□□ -0.31
SATB1-204ENST00000417717 GZF1Q9H116 711 aaPredicted RBP13.13□□□□□ -0.31
SATB1-204ENST00000417717 TAF3Q5VWG9 929 aa13.13□□□□□ -0.31
SATB1-204ENST00000417717 HTATSF1O43719 755 aaKnown RBP13.13□□□□□ -0.31
SATB1-204ENST00000417717 CSPP1Q1MSJ5 1256 aa13.12□□□□□ -0.31
SATB1-204ENST00000417717 FAM43AQ8N2R8 423 aa13.12□□□□□ -0.31
SATB1-204ENST00000417717 RGS3P49796 1198 aa13.11□□□□□ -0.31
SATB1-204ENST00000417717 DRC7Q8IY82 874 aa13.1□□□□□ -0.31
SATB1-204ENST00000417717 TEX35Q5T0J7 233 aa13.1□□□□□ -0.31
SATB1-204ENST00000417717 GPS2Q13227 327 aa13.09□□□□□ -0.31
SATB1-204ENST00000417717 PDIA4P13667 645 aaKnown RBP13.09□□□□□ -0.31
SATB1-204ENST00000417717 CASC1Q6TDU7 716 aa13.08□□□□□ -0.31
SATB1-204ENST00000417717 NCAPD3P42695 1498 aa13.08□□□□□ -0.32
SATB1-204ENST00000417717 SYAP1Q96A49 352 aaPredicted RBP13.08□□□□□ -0.32
SATB1-204ENST00000417717 ZMYND15Q9H091 742 aa13.08□□□□□ -0.32
SATB1-204ENST00000417717 CCER2I3L3R5 266 aa13.07□□□□□ -0.32
SATB1-204ENST00000417717 GOLGA3Q08378 1498 aa13.07□□□□□ -0.32
SATB1-204ENST00000417717 IL27Q8NEV9 243 aa13.06□□□□□ -0.32
SATB1-204ENST00000417717 BICRAQ9NZM4 1560 aa13.05□□□□□ -0.32
SATB1-204ENST00000417717 TNIKQ9UKE5 1360 aa13.05□□□□□ -0.32
SATB1-204ENST00000417717 CEP164Q9UPV0 1460 aa13.04□□□□□ -0.32
SATB1-204ENST00000417717 SLKQ9H2G2 1235 aaPredicted RBP13.03□□□□□ -0.32
SATB1-204ENST00000417717 DDX11L8A8MPP1 907 aa13.03□□□□□ -0.32
SATB1-204ENST00000417717 GOLGA6L4A6NEF3 574 aa13.02□□□□□ -0.32
SATB1-204ENST00000417717 PATL2C9JE40 543 aaKnown RBP13.02□□□□□ -0.32
SATB1-204ENST00000417717 TAF7LQ5H9L4 462 aa13.02□□□□□ -0.32
SATB1-204ENST00000417717 KIF27Q86VH2 1401 aa13.02□□□□□ -0.32
SATB1-204ENST00000417717 CWC15Q9P013 229 aaKnown RBP13.01□□□□□ -0.33
SATB1-204ENST00000417717 CALD1Q05682 793 aaKnown RBP13.01□□□□□ -0.33
SATB1-204ENST00000417717 ZBTB7CA1YPR0 619 aa13.01□□□□□ -0.33
SATB1-204ENST00000417717 CFAP44Q96MT7 982 aa13□□□□□ -0.33
SATB1-204ENST00000417717 PEG3Q9GZU2 1588 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms