RNA–Protein interactions for RNA: ENST00000417521.5

DDR1-231, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-231ENST00000417521 PRG4Q92954 1404 aaPredicted RBP27.86■■■□□ 2.05
DDR1-231ENST00000417521 ERCC6L2Q5T890 1561 aa27.86■■■□□ 2.05
DDR1-231ENST00000417521 KIAA0586Q9BVV6 1533 aa27.84■■■□□ 2.05
DDR1-231ENST00000417521 RUSC2Q8N2Y8 1516 aa27.8■■■□□ 2.04
DDR1-231ENST00000417521 TRHP20396 242 aaPredicted RBP27.76■■■□□ 2.04
DDR1-231ENST00000417521 RAPGEF2Q9Y4G8 1499 aa27.71■■■□□ 2.03
DDR1-231ENST00000417521 CARMIL2Q6F5E8 1435 aa27.56■■■□□ 2
DDR1-231ENST00000417521 PRXQ9BXM0 1461 aa27.56■■■□□ 2
DDR1-231ENST00000417521 IQGAP2Q13576 1575 aa27.55■■■□□ 2
DDR1-231ENST00000417521 CSRNP3Q8WYN3 585 aa27.52■■■□□ 2
DDR1-231ENST00000417521 PTPRGP23470 1445 aa27.52■■■□□ 2
DDR1-231ENST00000417521 TNIKQ9UKE5 1360 aa27.51■■□□□ 1.99
DDR1-231ENST00000417521 NPM1P06748 294 aaKnown RBP eCLIP27.5■■□□□ 1.99
DDR1-231ENST00000417521 EEA1Q15075 1411 aa27.46■■□□□ 1.99
DDR1-231ENST00000417521 UGGT2Q9NYU1 1516 aa27.44■■□□□ 1.98
DDR1-231ENST00000417521 DISP1Q96F81 1524 aa27.43■■□□□ 1.98
DDR1-231ENST00000417521 CHIC1Q5VXU3 224 aa27.42■■□□□ 1.98
DDR1-231ENST00000417521 TTBK1Q5TCY1 1321 aaPredicted RBP27.42■■□□□ 1.98
DDR1-231ENST00000417521 ADCY10Q96PN6 1610 aa27.35■■□□□ 1.97
DDR1-231ENST00000417521 FAM9AQ8IZU1 332 aaPredicted RBP27.32■■□□□ 1.96
DDR1-231ENST00000417521 MAPKBP1O60336 1514 aa27.3■■□□□ 1.96
DDR1-231ENST00000417521 UACAQ9BZF9 1416 aa27.3■■□□□ 1.96
DDR1-231ENST00000417521 GOLGA3Q08378 1498 aa27.3■■□□□ 1.96
DDR1-231ENST00000417521 UHRF1BP1LA0JNW5 1464 aa27.28■■□□□ 1.96
DDR1-231ENST00000417521 KIAA0556O60303 1618 aa27.28■■□□□ 1.96
DDR1-231ENST00000417521 ABCC2Q92887 1545 aa27.27■■□□□ 1.96
DDR1-231ENST00000417521 FAM69CQ0P6D2 419 aa27.26■■□□□ 1.95
DDR1-231ENST00000417521 ABCC10Q5T3U5 1492 aa27.26■■□□□ 1.95
DDR1-231ENST00000417521 CTTNBP2Q8WZ74 1663 aa27.25■■□□□ 1.95
DDR1-231ENST00000417521 KDM5BQ9UGL1 1544 aa27.14■■□□□ 1.94
DDR1-231ENST00000417521 PLB1Q6P1J6 1458 aa27.13■■□□□ 1.93
DDR1-231ENST00000417521 ASXL2Q76L83 1435 aa27.12■■□□□ 1.93
DDR1-231ENST00000417521 DIP2BQ9P265 1576 aa27.11■■□□□ 1.93
DDR1-231ENST00000417521 P3H3Q8IVL6 736 aa27.11■■□□□ 1.93
DDR1-231ENST00000417521 KIF13AQ9H1H9 1805 aa27.08■■□□□ 1.93
DDR1-231ENST00000417521 KIF21BO75037 1637 aa27.07■■□□□ 1.92
DDR1-231ENST00000417521 ABCA8O94911 1581 aa27.03■■□□□ 1.92
DDR1-231ENST00000417521 RANGAP1P46060 587 aaPredicted RBP27■■□□□ 1.91
DDR1-231ENST00000417521 SAMD9Q5K651 1589 aa27■■□□□ 1.91
DDR1-231ENST00000417521 UBTFP17480 764 aaKnown RBP27■■□□□ 1.91
DDR1-231ENST00000417521 ZCCHC11Q5TAX3 1644 aaKnown RBP26.96■■□□□ 1.91
DDR1-231ENST00000417521 EPRSP07814 1512 aaKnown RBP26.96■■□□□ 1.91
DDR1-231ENST00000417521 GLI2P10070 1586 aa26.95■■□□□ 1.91
DDR1-231ENST00000417521 EHMT2Q96KQ7 1210 aa26.94■■□□□ 1.9
DDR1-231ENST00000417521 WDR7Q9Y4E6 1490 aa26.93■■□□□ 1.9
DDR1-231ENST00000417521 ILDR1Q86SU0 546 aaPredicted RBP26.91■■□□□ 1.9
DDR1-231ENST00000417521 FHOD3Q2V2M9 1422 aa26.9■■□□□ 1.9
DDR1-231ENST00000417521 ATP10BO94823 1461 aa26.88■■□□□ 1.89
DDR1-231ENST00000417521 EFCAB5A4FU69 1503 aa26.87■■□□□ 1.89
DDR1-231ENST00000417521 ARID3CA6NKF2 412 aa26.86■■□□□ 1.89
DDR1-231ENST00000417521 KCNH8Q96L42 1107 aa26.85■■□□□ 1.89
DDR1-231ENST00000417521 RAPGEF6Q8TEU7 1601 aa26.79■■□□□ 1.88
DDR1-231ENST00000417521 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.78■■□□□ 1.88
DDR1-231ENST00000417521 HNRNPUL2Q1KMD3 747 aaKnown RBP26.78■■□□□ 1.88
DDR1-231ENST00000417521 NUP153P49790 1475 aaKnown RBP26.77■■□□□ 1.88
DDR1-231ENST00000417521 TEX14Q8IWB6 1497 aa26.76■■□□□ 1.87
DDR1-231ENST00000417521 TSPOAP1O95153 1857 aa26.76■■□□□ 1.87
DDR1-231ENST00000417521 KDM6BO15054 1643 aa26.75■■□□□ 1.87
DDR1-231ENST00000417521 MAP3K4Q9Y6R4 1608 aa26.75■■□□□ 1.87
DDR1-231ENST00000417521 CD109Q6YHK3 1445 aa26.74■■□□□ 1.87
DDR1-231ENST00000417521 ARHGAP35Q9NRY4 1499 aa26.73■■□□□ 1.87
DDR1-231ENST00000417521 PPRC1Q5VV67 1664 aaKnown RBP26.71■■□□□ 1.87
DDR1-231ENST00000417521 FMN1Q68DA7 1419 aa26.7■■□□□ 1.86
DDR1-231ENST00000417521 MAGI3Q5TCQ9 1506 aa26.7■■□□□ 1.86
DDR1-231ENST00000417521 PLEKHD1A6NEE1 506 aa26.68■■□□□ 1.86
DDR1-231ENST00000417521 COL17A1Q9UMD9 1497 aaPredicted RBP26.65■■□□□ 1.86
DDR1-231ENST00000417521 CFAP43Q8NDM7 1665 aa26.62■■□□□ 1.85
DDR1-231ENST00000417521 ATP1B4Q9UN42 357 aaPredicted RBP26.6■■□□□ 1.85
DDR1-231ENST00000417521 ABCA9Q8IUA7 1624 aa26.55■■□□□ 1.84
DDR1-231ENST00000417521 PHLDB1Q86UU1 1377 aa26.54■■□□□ 1.84
DDR1-231ENST00000417521 CDK11AQ9UQ88 783 aaPredicted RBP26.53■■□□□ 1.84
DDR1-231ENST00000417521 CDK13Q14004 1512 aaKnown RBP26.52■■□□□ 1.84
DDR1-231ENST00000417521 CLIP1P30622 1438 aa26.5■■□□□ 1.83
DDR1-231ENST00000417521 HECW1Q76N89 1606 aa26.49■■□□□ 1.83
DDR1-231ENST00000417521 ARAP3Q8WWN8 1544 aa26.47■■□□□ 1.83
DDR1-231ENST00000417521 NEO1Q92859 1461 aa26.45■■□□□ 1.82
DDR1-231ENST00000417521 CASKIN1Q8WXD9 1431 aa26.44■■□□□ 1.82
DDR1-231ENST00000417521 KDM4FA0A1W2PPD8 638 aa26.41■■□□□ 1.82
DDR1-231ENST00000417521 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.41■■□□□ 1.82
DDR1-231ENST00000417521 TROQ12816 1431 aaPredicted RBP26.37■■□□□ 1.81
DDR1-231ENST00000417521 RAPGEF3O95398 923 aa26.36■■□□□ 1.81
DDR1-231ENST00000417521 CCDC18Q5T9S5 1454 aa26.34■■□□□ 1.81
DDR1-231ENST00000417521 PLCH2O75038 1416 aa26.33■■□□□ 1.81
DDR1-231ENST00000417521 FANCAO15360 1455 aa26.33■■□□□ 1.81
DDR1-231ENST00000417521 AKNAQ7Z591 1439 aa26.33■■□□□ 1.81
DDR1-231ENST00000417521 FYCO1Q9BQS8 1478 aa26.32■■□□□ 1.8
DDR1-231ENST00000417521 PCF11O94913 1555 aaKnown RBP26.31■■□□□ 1.8
DDR1-231ENST00000417521 TTC37Q6PGP7 1564 aa26.31■■□□□ 1.8
DDR1-231ENST00000417521 CEP162Q5TB80 1403 aa26.3■■□□□ 1.8
DDR1-231ENST00000417521 LOC105371045A0A1W2PR82 267 aa26.28■■□□□ 1.8
DDR1-231ENST00000417521 EFCAB2Q5VUJ9 269 aa26.28■■□□□ 1.8
DDR1-231ENST00000417521 DENND4BO75064 1496 aaPredicted RBP26.27■■□□□ 1.8
DDR1-231ENST00000417521 KIF14Q15058 1648 aa26.23■■□□□ 1.79
DDR1-231ENST00000417521 ADGRL1O94910 1474 aa26.23■■□□□ 1.79
DDR1-231ENST00000417521 CFAP74Q9C0B2 1584 aa26.22■■□□□ 1.79
DDR1-231ENST00000417521 LRRIQ1Q96JM4 1722 aa26.2■■□□□ 1.78
DDR1-231ENST00000417521 SCAPERQ9BY12 1400 aa26.19■■□□□ 1.78
DDR1-231ENST00000417521 FRMPD1Q5SYB0 1578 aa26.17■■□□□ 1.78
DDR1-231ENST00000417521 ARHGAP5Q13017 1502 aa26.11■■□□□ 1.77
DDR1-231ENST00000417521 POGZQ7Z3K3 1410 aa26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms