RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 PPARGC1BQ86YN6 1023 aaKnown RBP26.77■■□□□ 1.88
CALD1-204ENST00000417172 VPS8Q8N3P4 1428 aa26.76■■□□□ 1.87
CALD1-204ENST00000417172 GRIN2AQ12879 1464 aa26.75■■□□□ 1.87
CALD1-204ENST00000417172 SYNJ2O15056 1496 aa26.74■■□□□ 1.87
CALD1-204ENST00000417172 FBLN2P98095 1184 aa26.69■■□□□ 1.86
CALD1-204ENST00000417172 P3H3Q8IVL6 736 aa26.68■■□□□ 1.86
CALD1-204ENST00000417172 CHMP7Q8WUX9 453 aaPredicted RBP26.68■■□□□ 1.86
CALD1-204ENST00000417172 IQGAP2Q13576 1575 aa26.66■■□□□ 1.86
CALD1-204ENST00000417172 CEP170Q5SW79 1584 aa26.65■■□□□ 1.86
CALD1-204ENST00000417172 FHOD3Q2V2M9 1422 aa26.63■■□□□ 1.85
CALD1-204ENST00000417172 EFCAB5A4FU69 1503 aa26.62■■□□□ 1.85
CALD1-204ENST00000417172 CHD1O14646 1710 aa26.62■■□□□ 1.85
CALD1-204ENST00000417172 SAMD9Q5K651 1589 aa26.62■■□□□ 1.85
CALD1-204ENST00000417172 TTBK1Q5TCY1 1321 aaPredicted RBP26.6■■□□□ 1.85
CALD1-204ENST00000417172 KIAA0586Q9BVV6 1533 aa26.56■■□□□ 1.84
CALD1-204ENST00000417172 PCGF6Q9BYE7 350 aa26.55■■□□□ 1.84
CALD1-204ENST00000417172 NUP160Q12769 1436 aa26.53■■□□□ 1.84
CALD1-204ENST00000417172 PCF11O94913 1555 aaKnown RBP26.5■■□□□ 1.83
CALD1-204ENST00000417172 UGGT2Q9NYU1 1516 aa26.49■■□□□ 1.83
CALD1-204ENST00000417172 TRIM26Q12899 539 aaPredicted RBP26.47■■□□□ 1.83
CALD1-204ENST00000417172 APLP2Q06481 763 aa26.42■■□□□ 1.82
CALD1-204ENST00000417172 DISP1Q96F81 1524 aa26.42■■□□□ 1.82
CALD1-204ENST00000417172 KIAA0556O60303 1618 aa26.41■■□□□ 1.82
CALD1-204ENST00000417172 FMN1Q68DA7 1419 aa26.37■■□□□ 1.81
CALD1-204ENST00000417172 ATP1B4Q9UN42 357 aaPredicted RBP26.35■■□□□ 1.81
CALD1-204ENST00000417172 KANK4Q5T7N3 995 aaPredicted RBP26.35■■□□□ 1.81
CALD1-204ENST00000417172 FYCO1Q9BQS8 1478 aa26.34■■□□□ 1.81
CALD1-204ENST00000417172 LRRIQ1Q96JM4 1722 aa26.34■■□□□ 1.81
CALD1-204ENST00000417172 CASKIN1Q8WXD9 1431 aa26.34■■□□□ 1.81
CALD1-204ENST00000417172 JPH4Q96JJ6 628 aa26.33■■□□□ 1.81
CALD1-204ENST00000417172 TIAM1Q13009 1591 aa26.33■■□□□ 1.8
CALD1-204ENST00000417172 CFAP43Q8NDM7 1665 aa26.3■■□□□ 1.8
CALD1-204ENST00000417172 MAP3K1Q13233 1512 aa26.23■■□□□ 1.79
CALD1-204ENST00000417172 SHROOM2Q13796 1616 aa26.22■■□□□ 1.79
CALD1-204ENST00000417172 CLASP1Q7Z460 1538 aa26.21■■□□□ 1.79
CALD1-204ENST00000417172 CARMIL2Q6F5E8 1435 aa26.2■■□□□ 1.78
CALD1-204ENST00000417172 PRG4Q92954 1404 aaPredicted RBP26.2■■□□□ 1.78
CALD1-204ENST00000417172 LRRC9Q6ZRR7 1453 aa26.18■■□□□ 1.78
CALD1-204ENST00000417172 HECW1Q76N89 1606 aa26.18■■□□□ 1.78
CALD1-204ENST00000417172 ERCC6L2Q5T890 1561 aa26.16■■□□□ 1.78
CALD1-204ENST00000417172 RAPGEF6Q8TEU7 1601 aa26.14■■□□□ 1.78
CALD1-204ENST00000417172 ARID3CA6NKF2 412 aa26.13■■□□□ 1.77
CALD1-204ENST00000417172 PLB1Q6P1J6 1458 aa26.12■■□□□ 1.77
CALD1-204ENST00000417172 CDK13Q14004 1512 aaKnown RBP26.12■■□□□ 1.77
CALD1-204ENST00000417172 EPRSP07814 1512 aaKnown RBP26.09■■□□□ 1.77
CALD1-204ENST00000417172 NUP153P49790 1475 aaKnown RBP26.07■■□□□ 1.76
CALD1-204ENST00000417172 MAGI3Q5TCQ9 1506 aa26.06■■□□□ 1.76
CALD1-204ENST00000417172 CCDC18Q5T9S5 1454 aa26.05■■□□□ 1.76
CALD1-204ENST00000417172 ABCA8O94911 1581 aa26.02■■□□□ 1.76
CALD1-204ENST00000417172 MTUS2Q5JR59 1369 aa26■■□□□ 1.75
CALD1-204ENST00000417172 PTPRGP23470 1445 aa25.99■■□□□ 1.75
CALD1-204ENST00000417172 PHLDB1Q86UU1 1377 aa25.98■■□□□ 1.75
CALD1-204ENST00000417172 EHBP1L1Q8N3D4 1523 aa25.96■■□□□ 1.75
CALD1-204ENST00000417172 OSCARQ8IYS5 282 aa25.94■■□□□ 1.74
CALD1-204ENST00000417172 RRBP1Q9P2E9 1410 aaKnown RBP25.93■■□□□ 1.74
CALD1-204ENST00000417172 SUPT6HQ7KZ85 1726 aaKnown RBP25.92■■□□□ 1.74
CALD1-204ENST00000417172 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.9■■□□□ 1.74
CALD1-204ENST00000417172 HNRNPUL2Q1KMD3 747 aaKnown RBP25.9■■□□□ 1.74
CALD1-204ENST00000417172 NCOA2Q15596 1464 aa25.88■■□□□ 1.73
CALD1-204ENST00000417172 CCNB3Q8WWL7 1395 aa25.86■■□□□ 1.73
CALD1-204ENST00000417172 UACAQ9BZF9 1416 aa25.84■■□□□ 1.73
CALD1-204ENST00000417172 ATP10BO94823 1461 aa25.84■■□□□ 1.73
CALD1-204ENST00000417172 ARHGEF11O15085 1522 aa25.83■■□□□ 1.73
CALD1-204ENST00000417172 ABCC2Q92887 1545 aa25.79■■□□□ 1.72
CALD1-204ENST00000417172 KIF14Q15058 1648 aa25.77■■□□□ 1.72
CALD1-204ENST00000417172 FGD6Q6ZV73 1430 aa25.76■■□□□ 1.71
CALD1-204ENST00000417172 TROQ12816 1431 aaPredicted RBP25.75■■□□□ 1.71
CALD1-204ENST00000417172 MYOM3Q5VTT5 1437 aa25.75■■□□□ 1.71
CALD1-204ENST00000417172 CDK11AQ9UQ88 783 aaPredicted RBP25.75■■□□□ 1.71
CALD1-204ENST00000417172 ITGAEP38570 1179 aa25.74■■□□□ 1.71
CALD1-204ENST00000417172 FAM50AQ14320 339 aaKnown RBP25.74■■□□□ 1.71
CALD1-204ENST00000417172 ADCY10Q96PN6 1610 aa25.71■■□□□ 1.71
CALD1-204ENST00000417172 ZCCHC11Q5TAX3 1644 aaKnown RBP25.69■■□□□ 1.7
CALD1-204ENST00000417172 UHRF1BP1LA0JNW5 1464 aa25.67■■□□□ 1.7
CALD1-204ENST00000417172 PTPN23Q9H3S7 1636 aa25.67■■□□□ 1.7
CALD1-204ENST00000417172 PLEKHD1A6NEE1 506 aa25.66■■□□□ 1.7
CALD1-204ENST00000417172 HRCP23327 699 aa25.63■■□□□ 1.69
CALD1-204ENST00000417172 KDM5BQ9UGL1 1544 aa25.61■■□□□ 1.69
CALD1-204ENST00000417172 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.58■■□□□ 1.69
CALD1-204ENST00000417172 CDC42BPAQ5VT25 1732 aa25.58■■□□□ 1.69
CALD1-204ENST00000417172 ITSN2Q9NZM3 1697 aa25.57■■□□□ 1.68
CALD1-204ENST00000417172 ABCC10Q5T3U5 1492 aa25.57■■□□□ 1.68
CALD1-204ENST00000417172 TCOF1Q13428 1488 aaKnown RBP25.56■■□□□ 1.68
CALD1-204ENST00000417172 GPATCH8Q9UKJ3 1502 aaKnown RBP25.56■■□□□ 1.68
CALD1-204ENST00000417172 MIA2Q96PC5 1412 aa25.55■■□□□ 1.68
CALD1-204ENST00000417172 PTPRKQ15262 1439 aa25.52■■□□□ 1.68
CALD1-204ENST00000417172 ZNF644Q9H582 1327 aaPredicted RBP25.51■■□□□ 1.67
CALD1-204ENST00000417172 TTC37Q6PGP7 1564 aa25.51■■□□□ 1.67
CALD1-204ENST00000417172 RIMBP3CA6NJZ7 1639 aa25.51■■□□□ 1.67
CALD1-204ENST00000417172 RIMBP3BA6NNM3 1639 aa25.51■■□□□ 1.67
CALD1-204ENST00000417172 RIMBP3Q9UFD9 1639 aa25.51■■□□□ 1.67
CALD1-204ENST00000417172 CCER1Q8TC90 406 aaPredicted RBP25.49■■□□□ 1.67
CALD1-204ENST00000417172 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.48■■□□□ 1.67
CALD1-204ENST00000417172 KCNH8Q96L42 1107 aa25.47■■□□□ 1.67
CALD1-204ENST00000417172 CFDP1Q9UEE9 299 aaPredicted RBP25.46■■□□□ 1.67
CALD1-204ENST00000417172 CDC42BPBQ9Y5S2 1711 aa25.46■■□□□ 1.67
CALD1-204ENST00000417172 CAMSAP2Q08AD1 1489 aa25.45■■□□□ 1.67
CALD1-204ENST00000417172 ZNF777Q9ULD5 760 aaPredicted RBP25.43■■□□□ 1.66
CALD1-204ENST00000417172 PREX2Q70Z35 1606 aa25.43■■□□□ 1.66
CALD1-204ENST00000417172 DNMT1P26358 1616 aaKnown RBP25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms