RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 JPH4Q96JJ6 628 aa26.72■■□□□ 1.87
ITGB1-204ENST00000417122 PRG4Q92954 1404 aaPredicted RBP26.69■■□□□ 1.86
ITGB1-204ENST00000417122 KIAA0586Q9BVV6 1533 aa26.66■■□□□ 1.86
ITGB1-204ENST00000417122 TRHP20396 242 aaPredicted RBP26.62■■□□□ 1.85
ITGB1-204ENST00000417122 RAPGEF2Q9Y4G8 1499 aa26.55■■□□□ 1.84
ITGB1-204ENST00000417122 IQGAP2Q13576 1575 aa26.48■■□□□ 1.83
ITGB1-204ENST00000417122 CARMIL2Q6F5E8 1435 aa26.39■■□□□ 1.82
ITGB1-204ENST00000417122 PRXQ9BXM0 1461 aa26.36■■□□□ 1.81
ITGB1-204ENST00000417122 CTTNBP2Q8WZ74 1663 aa26.34■■□□□ 1.81
ITGB1-204ENST00000417122 PTPRGP23470 1445 aa26.33■■□□□ 1.81
ITGB1-204ENST00000417122 ADCY10Q96PN6 1610 aa26.33■■□□□ 1.81
ITGB1-204ENST00000417122 TNIKQ9UKE5 1360 aa26.33■■□□□ 1.8
ITGB1-204ENST00000417122 UGGT2Q9NYU1 1516 aa26.32■■□□□ 1.8
ITGB1-204ENST00000417122 DISP1Q96F81 1524 aa26.31■■□□□ 1.8
ITGB1-204ENST00000417122 NPM1P06748 294 aaKnown RBP eCLIP26.31■■□□□ 1.8
ITGB1-204ENST00000417122 TTBK1Q5TCY1 1321 aaPredicted RBP26.3■■□□□ 1.8
ITGB1-204ENST00000417122 CSRNP3Q8WYN3 585 aa26.28■■□□□ 1.8
ITGB1-204ENST00000417122 EEA1Q15075 1411 aa26.24■■□□□ 1.79
ITGB1-204ENST00000417122 KIAA0556O60303 1618 aa26.23■■□□□ 1.79
ITGB1-204ENST00000417122 MAPKBP1O60336 1514 aa26.22■■□□□ 1.79
ITGB1-204ENST00000417122 KIF13AQ9H1H9 1805 aa26.21■■□□□ 1.79
ITGB1-204ENST00000417122 CHIC1Q5VXU3 224 aa26.17■■□□□ 1.78
ITGB1-204ENST00000417122 UACAQ9BZF9 1416 aa26.15■■□□□ 1.78
ITGB1-204ENST00000417122 GOLGA3Q08378 1498 aa26.15■■□□□ 1.78
ITGB1-204ENST00000417122 ABCC2Q92887 1545 aa26.14■■□□□ 1.78
ITGB1-204ENST00000417122 FAM9AQ8IZU1 332 aaPredicted RBP26.14■■□□□ 1.78
ITGB1-204ENST00000417122 UHRF1BP1LA0JNW5 1464 aa26.14■■□□□ 1.78
ITGB1-204ENST00000417122 ABCC10Q5T3U5 1492 aa26.14■■□□□ 1.78
ITGB1-204ENST00000417122 FAM69CQ0P6D2 419 aa26.11■■□□□ 1.77
ITGB1-204ENST00000417122 DIP2BQ9P265 1576 aa26.1■■□□□ 1.77
ITGB1-204ENST00000417122 KDM5BQ9UGL1 1544 aa26.03■■□□□ 1.76
ITGB1-204ENST00000417122 KIF21BO75037 1637 aa26.01■■□□□ 1.75
ITGB1-204ENST00000417122 ASXL2Q76L83 1435 aa26.01■■□□□ 1.75
ITGB1-204ENST00000417122 PLB1Q6P1J6 1458 aa26■■□□□ 1.75
ITGB1-204ENST00000417122 ZCCHC11Q5TAX3 1644 aaKnown RBP25.99■■□□□ 1.75
ITGB1-204ENST00000417122 ABCA8O94911 1581 aa25.96■■□□□ 1.75
ITGB1-204ENST00000417122 P3H3Q8IVL6 736 aa25.96■■□□□ 1.75
ITGB1-204ENST00000417122 SAMD9Q5K651 1589 aa25.95■■□□□ 1.75
ITGB1-204ENST00000417122 TSPOAP1O95153 1857 aa25.92■■□□□ 1.74
ITGB1-204ENST00000417122 GLI2P10070 1586 aa25.9■■□□□ 1.74
ITGB1-204ENST00000417122 RANGAP1P46060 587 aaPredicted RBP25.88■■□□□ 1.73
ITGB1-204ENST00000417122 EPRSP07814 1512 aaKnown RBP25.85■■□□□ 1.73
ITGB1-204ENST00000417122 EHMT2Q96KQ7 1210 aa25.83■■□□□ 1.73
ITGB1-204ENST00000417122 WDR7Q9Y4E6 1490 aa25.83■■□□□ 1.73
ITGB1-204ENST00000417122 UBTFP17480 764 aaKnown RBP25.81■■□□□ 1.72
ITGB1-204ENST00000417122 FHOD3Q2V2M9 1422 aa25.8■■□□□ 1.72
ITGB1-204ENST00000417122 RAPGEF6Q8TEU7 1601 aa25.78■■□□□ 1.72
ITGB1-204ENST00000417122 PPRC1Q5VV67 1664 aaKnown RBP25.78■■□□□ 1.72
ITGB1-204ENST00000417122 EFCAB5A4FU69 1503 aa25.78■■□□□ 1.72
ITGB1-204ENST00000417122 MAP3K4Q9Y6R4 1608 aa25.77■■□□□ 1.72
ITGB1-204ENST00000417122 KDM6BO15054 1643 aa25.77■■□□□ 1.72
ITGB1-204ENST00000417122 ARID3CA6NKF2 412 aa25.75■■□□□ 1.71
ITGB1-204ENST00000417122 ATP10BO94823 1461 aa25.74■■□□□ 1.71
ITGB1-204ENST00000417122 KCNH8Q96L42 1107 aa25.71■■□□□ 1.71
ITGB1-204ENST00000417122 TEX14Q8IWB6 1497 aa25.67■■□□□ 1.7
ITGB1-204ENST00000417122 CFAP43Q8NDM7 1665 aa25.67■■□□□ 1.7
ITGB1-204ENST00000417122 NUP153P49790 1475 aaKnown RBP25.66■■□□□ 1.7
ITGB1-204ENST00000417122 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.64■■□□□ 1.7
ITGB1-204ENST00000417122 HNRNPUL2Q1KMD3 747 aaKnown RBP25.64■■□□□ 1.7
ITGB1-204ENST00000417122 CD109Q6YHK3 1445 aa25.63■■□□□ 1.69
ITGB1-204ENST00000417122 ARHGAP35Q9NRY4 1499 aa25.61■■□□□ 1.69
ITGB1-204ENST00000417122 MAGI3Q5TCQ9 1506 aa25.58■■□□□ 1.69
ITGB1-204ENST00000417122 COL17A1Q9UMD9 1497 aaPredicted RBP25.55■■□□□ 1.68
ITGB1-204ENST00000417122 FMN1Q68DA7 1419 aa25.54■■□□□ 1.68
ITGB1-204ENST00000417122 ABCA9Q8IUA7 1624 aa25.53■■□□□ 1.68
ITGB1-204ENST00000417122 PLEKHD1A6NEE1 506 aa25.51■■□□□ 1.67
ITGB1-204ENST00000417122 AEBP2Q6ZN18 517 aaPredicted RBP25.51■■□□□ 1.67
ITGB1-204ENST00000417122 HECW1Q76N89 1606 aa25.47■■□□□ 1.67
ITGB1-204ENST00000417122 CDK13Q14004 1512 aaKnown RBP25.47■■□□□ 1.67
ITGB1-204ENST00000417122 ATP1B4Q9UN42 357 aaPredicted RBP25.46■■□□□ 1.67
ITGB1-204ENST00000417122 ARAP3Q8WWN8 1544 aa25.37■■□□□ 1.65
ITGB1-204ENST00000417122 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.37■■□□□ 1.651e-9■■■□□ 15
ITGB1-204ENST00000417122 PHLDB1Q86UU1 1377 aa25.36■■□□□ 1.65
ITGB1-204ENST00000417122 CLIP1P30622 1438 aa25.36■■□□□ 1.65
ITGB1-204ENST00000417122 NEO1Q92859 1461 aa25.35■■□□□ 1.65
ITGB1-204ENST00000417122 LRRIQ1Q96JM4 1722 aa25.34■■□□□ 1.65
ITGB1-204ENST00000417122 CDK11AQ9UQ88 783 aaPredicted RBP25.33■■□□□ 1.65
ITGB1-204ENST00000417122 TTC37Q6PGP7 1564 aa25.32■■□□□ 1.64
ITGB1-204ENST00000417122 PCF11O94913 1555 aaKnown RBP25.31■■□□□ 1.64
ITGB1-204ENST00000417122 CASKIN1Q8WXD9 1431 aa25.31■■□□□ 1.64
ITGB1-204ENST00000417122 KDM4FA0A1W2PPD8 638 aa25.31■■□□□ 1.64
ITGB1-204ENST00000417122 CFAP74Q9C0B2 1584 aa25.26■■□□□ 1.63
ITGB1-204ENST00000417122 FANCAO15360 1455 aa25.25■■□□□ 1.63
ITGB1-204ENST00000417122 CCDC18Q5T9S5 1454 aa25.25■■□□□ 1.63
ITGB1-204ENST00000417122 TROQ12816 1431 aaPredicted RBP25.24■■□□□ 1.63
ITGB1-204ENST00000417122 FYCO1Q9BQS8 1478 aa25.23■■□□□ 1.63
ITGB1-204ENST00000417122 AKNAQ7Z591 1439 aa25.23■■□□□ 1.63
ITGB1-204ENST00000417122 RAPGEF3O95398 923 aa25.23■■□□□ 1.63
ITGB1-204ENST00000417122 KIF14Q15058 1648 aa25.23■■□□□ 1.63
ITGB1-204ENST00000417122 ADGRL1O94910 1474 aa25.21■■□□□ 1.63
ITGB1-204ENST00000417122 PLCH2O75038 1416 aa25.2■■□□□ 1.63
ITGB1-204ENST00000417122 FRMPD1Q5SYB0 1578 aa25.19■■□□□ 1.62
ITGB1-204ENST00000417122 MYO5CQ9NQX4 1742 aa25.19■■□□□ 1.62
ITGB1-204ENST00000417122 DENND4BO75064 1496 aaPredicted RBP25.17■■□□□ 1.62
ITGB1-204ENST00000417122 CEP162Q5TB80 1403 aa25.16■■□□□ 1.62
ITGB1-204ENST00000417122 RICTORQ6R327 1708 aa25.15■■□□□ 1.62
ITGB1-204ENST00000417122 EFCAB2Q5VUJ9 269 aa25.11■■□□□ 1.61
ITGB1-204ENST00000417122 LOC105371045A0A1W2PR82 267 aa25.1■■□□□ 1.61
ITGB1-204ENST00000417122 SCAPERQ9BY12 1400 aa25.08■■□□□ 1.61
ITGB1-204ENST00000417122 ARHGAP5Q13017 1502 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms