RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 RUSC2Q8N2Y8 1516 aa37.97■■■■□ 3.67
ACTB-203ENST00000417101 CUL7Q14999 1698 aa37.86■■■■□ 3.65
ACTB-203ENST00000417101 KIAA0586Q9BVV6 1533 aa37.82■■■■□ 3.64
ACTB-203ENST00000417101 CARMIL1Q5VZK9 1371 aa37.76■■■■□ 3.64
ACTB-203ENST00000417101 NPM1P06748 294 aaKnown RBP eCLIP37.62■■■■□ 3.61
ACTB-203ENST00000417101 ADCY10Q96PN6 1610 aa37.55■■■■□ 3.6
ACTB-203ENST00000417101 KIF13AQ9H1H9 1805 aa37.54■■■■□ 3.6
ACTB-203ENST00000417101 PTPRGP23470 1445 aa37.48■■■■□ 3.59
ACTB-203ENST00000417101 MAPKBP1O60336 1514 aa37.47■■■■□ 3.59
ACTB-203ENST00000417101 FAM69CQ0P6D2 419 aa37.47■■■■□ 3.59
ACTB-203ENST00000417101 ABCC10Q5T3U5 1492 aa37.46■■■■□ 3.59
ACTB-203ENST00000417101 TTBK1Q5TCY1 1321 aaPredicted RBP37.46■■■■□ 3.59
ACTB-203ENST00000417101 IQGAP2Q13576 1575 aa37.46■■■■□ 3.59
ACTB-203ENST00000417101 CARMIL2Q6F5E8 1435 aa37.45■■■■□ 3.59
ACTB-203ENST00000417101 TNIKQ9UKE5 1360 aa37.41■■■■□ 3.58
ACTB-203ENST00000417101 RAPGEF2Q9Y4G8 1499 aa37.4■■■■□ 3.58
ACTB-203ENST00000417101 DIP2BQ9P265 1576 aa37.34■■■■□ 3.57
ACTB-203ENST00000417101 AEBP2Q6ZN18 517 aaPredicted RBP37.3■■■■□ 3.56
ACTB-203ENST00000417101 DISP1Q96F81 1524 aa37.29■■■■□ 3.56
ACTB-203ENST00000417101 ABCC2Q92887 1545 aa37.23■■■■□ 3.55
ACTB-203ENST00000417101 UGGT2Q9NYU1 1516 aa37.22■■■■□ 3.55
ACTB-203ENST00000417101 UACAQ9BZF9 1416 aa37.18■■■■□ 3.54
ACTB-203ENST00000417101 UHRF1BP1LA0JNW5 1464 aa37.16■■■■□ 3.54
ACTB-203ENST00000417101 ASXL2Q76L83 1435 aa37.11■■■■□ 3.53
ACTB-203ENST00000417101 KIAA0556O60303 1618 aa37.1■■■■□ 3.53
ACTB-203ENST00000417101 PLB1Q6P1J6 1458 aa37.08■■■■□ 3.53
ACTB-203ENST00000417101 TSPOAP1O95153 1857 aa37.07■■■■□ 3.53
ACTB-203ENST00000417101 PRXQ9BXM0 1461 aa37.05■■■■□ 3.52
ACTB-203ENST00000417101 CTTNBP2Q8WZ74 1663 aa37.02■■■■□ 3.52
ACTB-203ENST00000417101 KDM5BQ9UGL1 1544 aa37■■■■□ 3.51
ACTB-203ENST00000417101 KDM6BO15054 1643 aa36.99■■■■□ 3.51
ACTB-203ENST00000417101 GLI2P10070 1586 aa36.95■■■■□ 3.51
ACTB-203ENST00000417101 GOLGA3Q08378 1498 aa36.94■■■■□ 3.5
ACTB-203ENST00000417101 ZCCHC11Q5TAX3 1644 aaKnown RBP36.91■■■■□ 3.5
ACTB-203ENST00000417101 EPRSP07814 1512 aaKnown RBP36.87■■■■□ 3.49
ACTB-203ENST00000417101 CSRNP3Q8WYN3 585 aa36.83■■■■□ 3.49
ACTB-203ENST00000417101 PPRC1Q5VV67 1664 aaKnown RBP36.82■■■■□ 3.48
ACTB-203ENST00000417101 ABCA8O94911 1581 aa36.76■■■■□ 3.48
ACTB-203ENST00000417101 WDR7Q9Y4E6 1490 aa36.75■■■■□ 3.47
ACTB-203ENST00000417101 MAP3K4Q9Y6R4 1608 aa36.74■■■■□ 3.47
ACTB-203ENST00000417101 P3H3Q8IVL6 736 aa36.71■■■■□ 3.47
ACTB-203ENST00000417101 TEX14Q8IWB6 1497 aa36.66■■■■□ 3.46
ACTB-203ENST00000417101 EEA1Q15075 1411 aa36.65■■■■□ 3.46
ACTB-203ENST00000417101 KDM4FA0A1W2PPD8 638 aa36.64■■■■□ 3.46
ACTB-203ENST00000417101 FAM9AQ8IZU1 332 aaPredicted RBP36.64■■■■□ 3.46
ACTB-203ENST00000417101 COL17A1Q9UMD9 1497 aaPredicted RBP36.63■■■■□ 3.45
ACTB-203ENST00000417101 KCNH8Q96L42 1107 aa36.63■■■■□ 3.45
ACTB-203ENST00000417101 ARID3CA6NKF2 412 aa36.58■■■■□ 3.45
ACTB-203ENST00000417101 CD109Q6YHK3 1445 aa36.54■■■■□ 3.44
ACTB-203ENST00000417101 SAMD9Q5K651 1589 aa36.53■■■■□ 3.44
ACTB-203ENST00000417101 ATP10BO94823 1461 aa36.5■■■■□ 3.43
ACTB-203ENST00000417101 RANGAP1P46060 587 aaPredicted RBP36.49■■■■□ 3.43
ACTB-203ENST00000417101 MAGI3Q5TCQ9 1506 aa36.48■■■■□ 3.43
ACTB-203ENST00000417101 CFAP43Q8NDM7 1665 aa36.48■■■■□ 3.43
ACTB-203ENST00000417101 RAPGEF6Q8TEU7 1601 aa36.38■■■■□ 3.41
ACTB-203ENST00000417101 FHOD3Q2V2M9 1422 aa36.36■■■■□ 3.41
ACTB-203ENST00000417101 ADGRL1O94910 1474 aa36.35■■■■□ 3.41
ACTB-203ENST00000417101 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.33■■■■□ 3.41
ACTB-203ENST00000417101 HNRNPUL2Q1KMD3 747 aaKnown RBP36.33■■■■□ 3.41
ACTB-203ENST00000417101 KIF21BO75037 1637 aa36.33■■■■□ 3.41
ACTB-203ENST00000417101 NUP153P49790 1475 aaKnown RBP36.29■■■■□ 3.4
ACTB-203ENST00000417101 CHIC1Q5VXU3 224 aa36.25■■■■□ 3.39
ACTB-203ENST00000417101 ABCA9Q8IUA7 1624 aa36.23■■■■□ 3.39
ACTB-203ENST00000417101 EHMT2Q96KQ7 1210 aa36.21■■■■□ 3.39
ACTB-203ENST00000417101 EFCAB5A4FU69 1503 aa36.2■■■■□ 3.39
ACTB-203ENST00000417101 ARAP3Q8WWN8 1544 aa36.18■■■■□ 3.38
ACTB-203ENST00000417101 UBTFP17480 764 aaKnown RBP36.15■■■■□ 3.38
ACTB-203ENST00000417101 PHLDB1Q86UU1 1377 aa36.14■■■■□ 3.38
ACTB-203ENST00000417101 PLEKHD1A6NEE1 506 aa36.12■■■■□ 3.37
ACTB-203ENST00000417101 NEO1Q92859 1461 aa36.06■■■■□ 3.36
ACTB-203ENST00000417101 RAPGEF3O95398 923 aa36.04■■■■□ 3.36
ACTB-203ENST00000417101 CDK13Q14004 1512 aaKnown RBP35.96■■■■□ 3.35
ACTB-203ENST00000417101 ARHGAP35Q9NRY4 1499 aa35.93■■■■□ 3.34
ACTB-203ENST00000417101 ATP1B4Q9UN42 357 aaPredicted RBP35.92■■■■□ 3.34
ACTB-203ENST00000417101 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.92■■■■□ 3.345e-34■■■■□ 20.6
ACTB-203ENST00000417101 FMN1Q68DA7 1419 aa35.91■■■■□ 3.34
ACTB-203ENST00000417101 FRMPD1Q5SYB0 1578 aa35.89■■■■□ 3.34
ACTB-203ENST00000417101 FANCAO15360 1455 aa35.86■■■■□ 3.33
ACTB-203ENST00000417101 TTC37Q6PGP7 1564 aa35.86■■■■□ 3.33
ACTB-203ENST00000417101 AKNAQ7Z591 1439 aa35.86■■■■□ 3.33
ACTB-203ENST00000417101 DENND4BO75064 1496 aaPredicted RBP35.83■■■■□ 3.33
ACTB-203ENST00000417101 HECW1Q76N89 1606 aa35.82■■■■□ 3.32
ACTB-203ENST00000417101 CFAP74Q9C0B2 1584 aa35.8■■■■□ 3.32
ACTB-203ENST00000417101 HECW2Q9P2P5 1572 aa35.8■■■■□ 3.32
ACTB-203ENST00000417101 CDK11AQ9UQ88 783 aaPredicted RBP35.75■■■■□ 3.31
ACTB-203ENST00000417101 ARID4BQ4LE39 1312 aaPredicted RBP35.75■■■■□ 3.31
ACTB-203ENST00000417101 RICTORQ6R327 1708 aa35.74■■■■□ 3.31
ACTB-203ENST00000417101 PLCH2O75038 1416 aa35.71■■■■□ 3.31
ACTB-203ENST00000417101 ADAMTSL3P82987 1691 aa35.69■■■■□ 3.3
ACTB-203ENST00000417101 ARHGEF40Q8TER5 1519 aa35.69■■■■□ 3.3
ACTB-203ENST00000417101 PTPRMP28827 1452 aa35.65■■■■□ 3.3
ACTB-203ENST00000417101 SCAPERQ9BY12 1400 aa35.64■■■■□ 3.3
ACTB-203ENST00000417101 BCORL1Q5H9F3 1711 aa35.63■■■■□ 3.29
ACTB-203ENST00000417101 TROQ12816 1431 aaPredicted RBP35.63■■■■□ 3.29
ACTB-203ENST00000417101 ZMYM4Q5VZL5 1548 aa35.62■■■■□ 3.29
ACTB-203ENST00000417101 EFCAB2Q5VUJ9 269 aa35.61■■■■□ 3.29
ACTB-203ENST00000417101 KIF14Q15058 1648 aa35.61■■■■□ 3.29
ACTB-203ENST00000417101 YEATS2Q9ULM3 1422 aa35.59■■■■□ 3.29
ACTB-203ENST00000417101 CLIP1P30622 1438 aa35.57■■■■□ 3.29
ACTB-203ENST00000417101 POGZQ7Z3K3 1410 aa35.57■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms