RNA–Protein interactions for RNA: ENST00000415670.1

CDC42EP1-202, Transcript of CDC42 effector protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene CDC42EP1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-202ENST00000415670 ERICH3Q5RHP9 1530 aa29.35■■■□□ 2.29
CDC42EP1-202ENST00000415670 ABCC10Q5T3U5 1492 aa29.23■■■□□ 2.27
CDC42EP1-202ENST00000415670 KDM4FA0A1W2PPD8 638 aa29.21■■■□□ 2.27
CDC42EP1-202ENST00000415670 ADCY10Q96PN6 1610 aa29.2■■■□□ 2.26
CDC42EP1-202ENST00000415670 RUSC2Q8N2Y8 1516 aa29.2■■■□□ 2.26
CDC42EP1-202ENST00000415670 NPM1P06748 294 aaKnown RBP eCLIP29.17■■■□□ 2.26
CDC42EP1-202ENST00000415670 DIP2BQ9P265 1576 aa29.15■■■□□ 2.26
CDC42EP1-202ENST00000415670 TSPOAP1O95153 1857 aa29.13■■■□□ 2.25
CDC42EP1-202ENST00000415670 MAPKBP1O60336 1514 aa29.1■■■□□ 2.25
CDC42EP1-202ENST00000415670 TTBK1Q5TCY1 1321 aaPredicted RBP29.08■■■□□ 2.25
CDC42EP1-202ENST00000415670 IGF1RP08069 1367 aa29.02■■■□□ 2.24
CDC42EP1-202ENST00000415670 KDM6BO15054 1643 aa29.02■■■□□ 2.24
CDC42EP1-202ENST00000415670 KIAA0586Q9BVV6 1533 aa28.99■■■□□ 2.23
CDC42EP1-202ENST00000415670 PTPRGP23470 1445 aa28.89■■■□□ 2.22
CDC42EP1-202ENST00000415670 ILDR1Q86SU0 546 aaPredicted RBP28.88■■■□□ 2.21
CDC42EP1-202ENST00000415670 PPRC1Q5VV67 1664 aaKnown RBP28.81■■■□□ 2.2
CDC42EP1-202ENST00000415670 KIF27Q86VH2 1401 aa28.81■■■□□ 2.2
CDC42EP1-202ENST00000415670 ASXL2Q76L83 1435 aa28.78■■■□□ 2.2
CDC42EP1-202ENST00000415670 CUL7Q14999 1698 aa28.78■■■□□ 2.2
CDC42EP1-202ENST00000415670 CARMIL1Q5VZK9 1371 aa28.76■■■□□ 2.2
CDC42EP1-202ENST00000415670 COL17A1Q9UMD9 1497 aaPredicted RBP28.76■■■□□ 2.19
CDC42EP1-202ENST00000415670 TNIKQ9UKE5 1360 aa28.75■■■□□ 2.19
CDC42EP1-202ENST00000415670 ABCC2Q92887 1545 aa28.74■■■□□ 2.19
CDC42EP1-202ENST00000415670 ADGRL1O94910 1474 aa28.69■■■□□ 2.18
CDC42EP1-202ENST00000415670 CARMIL2Q6F5E8 1435 aa28.65■■■□□ 2.18
CDC42EP1-202ENST00000415670 GLI2P10070 1586 aa28.65■■■□□ 2.18
CDC42EP1-202ENST00000415670 PLB1Q6P1J6 1458 aa28.65■■■□□ 2.18
CDC42EP1-202ENST00000415670 DISP1Q96F81 1524 aa28.64■■■□□ 2.17
CDC42EP1-202ENST00000415670 UACAQ9BZF9 1416 aa28.62■■■□□ 2.17
CDC42EP1-202ENST00000415670 IQGAP2Q13576 1575 aa28.62■■■□□ 2.17
CDC42EP1-202ENST00000415670 UHRF1BP1LA0JNW5 1464 aa28.59■■■□□ 2.17
CDC42EP1-202ENST00000415670 EPRSP07814 1512 aaKnown RBP28.59■■■□□ 2.17
CDC42EP1-202ENST00000415670 MAP3K4Q9Y6R4 1608 aa28.54■■■□□ 2.16
CDC42EP1-202ENST00000415670 ZCCHC11Q5TAX3 1644 aaKnown RBP28.51■■■□□ 2.15
CDC42EP1-202ENST00000415670 KDM5BQ9UGL1 1544 aa28.51■■■□□ 2.15
CDC42EP1-202ENST00000415670 HECW2Q9P2P5 1572 aa28.48■■■□□ 2.15
CDC42EP1-202ENST00000415670 UGGT2Q9NYU1 1516 aa28.43■■■□□ 2.14
CDC42EP1-202ENST00000415670 KIAA0556O60303 1618 aa28.4■■■□□ 2.14
CDC42EP1-202ENST00000415670 KCNH8Q96L42 1107 aa28.39■■■□□ 2.14
CDC42EP1-202ENST00000415670 RAPGEF2Q9Y4G8 1499 aa28.38■■■□□ 2.13
CDC42EP1-202ENST00000415670 TEX14Q8IWB6 1497 aa28.37■■■□□ 2.13
CDC42EP1-202ENST00000415670 WDR7Q9Y4E6 1490 aa28.34■■■□□ 2.13
CDC42EP1-202ENST00000415670 CD109Q6YHK3 1445 aa28.27■■■□□ 2.12
CDC42EP1-202ENST00000415670 ARID3CA6NKF2 412 aa28.27■■■□□ 2.12
CDC42EP1-202ENST00000415670 ABCA8O94911 1581 aa28.2■■■□□ 2.11
CDC42EP1-202ENST00000415670 MAGI3Q5TCQ9 1506 aa28.2■■■□□ 2.1
CDC42EP1-202ENST00000415670 KIF21BO75037 1637 aa28.2■■■□□ 2.1
CDC42EP1-202ENST00000415670 CFAP43Q8NDM7 1665 aa28.16■■■□□ 2.1
CDC42EP1-202ENST00000415670 P3H3Q8IVL6 736 aa28.15■■■□□ 2.1
CDC42EP1-202ENST00000415670 CTTNBP2Q8WZ74 1663 aa28.15■■■□□ 2.1
CDC42EP1-202ENST00000415670 GOLGA3Q08378 1498 aa28.05■■■□□ 2.08
CDC42EP1-202ENST00000415670 RAPGEF3O95398 923 aa28.04■■■□□ 2.08
CDC42EP1-202ENST00000415670 ATP10BO94823 1461 aa28.03■■■□□ 2.08
CDC42EP1-202ENST00000415670 ARAP3Q8WWN8 1544 aa28.01■■■□□ 2.07
CDC42EP1-202ENST00000415670 PRXQ9BXM0 1461 aa27.98■■■□□ 2.07
CDC42EP1-202ENST00000415670 FBXO41Q8TF61 875 aa27.98■■■□□ 2.07
CDC42EP1-202ENST00000415670 PTPRMP28827 1452 aa27.96■■■□□ 2.07
CDC42EP1-202ENST00000415670 ADAMTSL3P82987 1691 aa27.94■■■□□ 2.06
CDC42EP1-202ENST00000415670 ABCA9Q8IUA7 1624 aa27.89■■■□□ 2.05
CDC42EP1-202ENST00000415670 RANGAP1P46060 587 aaPredicted RBP27.85■■■□□ 2.05
CDC42EP1-202ENST00000415670 CHIC1Q5VXU3 224 aa27.85■■■□□ 2.05
CDC42EP1-202ENST00000415670 ARID4BQ4LE39 1312 aaPredicted RBP27.85■■■□□ 2.05
CDC42EP1-202ENST00000415670 FRMPD1Q5SYB0 1578 aa27.85■■■□□ 2.05
CDC42EP1-202ENST00000415670 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.84■■■□□ 2.05
CDC42EP1-202ENST00000415670 HNRNPUL2Q1KMD3 747 aaKnown RBP27.84■■■□□ 2.05
CDC42EP1-202ENST00000415670 MADDQ8WXG6 1647 aa27.82■■■□□ 2.04
CDC42EP1-202ENST00000415670 PLPPR3Q6T4P5 718 aa27.82■■■□□ 2.04
CDC42EP1-202ENST00000415670 BCORL1Q5H9F3 1711 aa27.81■■■□□ 2.04
CDC42EP1-202ENST00000415670 HSPA2P54652 639 aa27.78■■■□□ 2.04
CDC42EP1-202ENST00000415670 LMTK3Q96Q04 1460 aa27.76■■■□□ 2.04
CDC42EP1-202ENST00000415670 PHLDB1Q86UU1 1377 aa27.76■■■□□ 2.03
CDC42EP1-202ENST00000415670 RAPGEF6Q8TEU7 1601 aa27.76■■■□□ 2.03
CDC42EP1-202ENST00000415670 NEO1Q92859 1461 aa27.75■■■□□ 2.03
CDC42EP1-202ENST00000415670 SAMD9Q5K651 1589 aa27.74■■■□□ 2.03
CDC42EP1-202ENST00000415670 PCF11O94913 1555 aaKnown RBP27.73■■■□□ 2.03
CDC42EP1-202ENST00000415670 RIMS1Q86UR5 1692 aaKnown RBP27.72■■■□□ 2.03
CDC42EP1-202ENST00000415670 NUP153P49790 1475 aaKnown RBP27.72■■■□□ 2.03
CDC42EP1-202ENST00000415670 FAM9AQ8IZU1 332 aaPredicted RBP27.7■■■□□ 2.02
CDC42EP1-202ENST00000415670 SIGLEC1Q9BZZ2 1709 aa27.7■■■□□ 2.02
CDC42EP1-202ENST00000415670 CSRNP3Q8WYN3 585 aa27.68■■■□□ 2.02
CDC42EP1-202ENST00000415670 FHOD3Q2V2M9 1422 aa27.67■■■□□ 2.02
CDC42EP1-202ENST00000415670 RICTORQ6R327 1708 aa27.64■■■□□ 2.02
CDC42EP1-202ENST00000415670 AKNAQ7Z591 1439 aa27.63■■■□□ 2.01
CDC42EP1-202ENST00000415670 MLECQ14165 292 aa27.62■■■□□ 2.01
CDC42EP1-202ENST00000415670 DENND4BO75064 1496 aaPredicted RBP27.62■■■□□ 2.01
CDC42EP1-202ENST00000415670 YEATS2Q9ULM3 1422 aa27.61■■■□□ 2.01
CDC42EP1-202ENST00000415670 ARHGEF40Q8TER5 1519 aa27.61■■■□□ 2.01
CDC42EP1-202ENST00000415670 PLEKHD1A6NEE1 506 aa27.6■■■□□ 2.01
CDC42EP1-202ENST00000415670 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.57■■■□□ 2
CDC42EP1-202ENST00000415670 FANCAO15360 1455 aa27.57■■■□□ 2
CDC42EP1-202ENST00000415670 TTC37Q6PGP7 1564 aa27.54■■■□□ 2
CDC42EP1-202ENST00000415670 CERKQ8TCT0 537 aa27.51■■□□□ 1.99
CDC42EP1-202ENST00000415670 CEBPAP49715 358 aaPredicted RBP27.48■■□□□ 1.99
CDC42EP1-202ENST00000415670 CDK13Q14004 1512 aaKnown RBP27.47■■□□□ 1.99
CDC42EP1-202ENST00000415670 ZFYVE16Q7Z3T8 1539 aa27.47■■□□□ 1.99
CDC42EP1-202ENST00000415670 HECW1Q76N89 1606 aa27.47■■□□□ 1.99
CDC42EP1-202ENST00000415670 EHMT2Q96KQ7 1210 aa27.45■■□□□ 1.98
CDC42EP1-202ENST00000415670 ZMYM4Q5VZL5 1548 aa27.45■■□□□ 1.98
CDC42EP1-202ENST00000415670 SCAPERQ9BY12 1400 aa27.42■■□□□ 1.98
CDC42EP1-202ENST00000415670 FER1L4A9Z1Z3 1794 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms