RNA–Protein interactions for RNA: ENST00000414675.6

LRCH3-202, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRCH3, Length 2,299 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-202ENST00000414675 ERCC6Q03468 1493 aa23.29■■□□□ 1.32
LRCH3-202ENST00000414675 FHOD3Q2V2M9 1422 aa23.27■■□□□ 1.32
LRCH3-202ENST00000414675 TIAM1Q13009 1591 aa23.27■■□□□ 1.31
LRCH3-202ENST00000414675 EFCAB5A4FU69 1503 aa23.26■■□□□ 1.31
LRCH3-202ENST00000414675 PBRM1Q86U86 1689 aa23.25■■□□□ 1.31
LRCH3-202ENST00000414675 PCF11O94913 1555 aaKnown RBP23.25■■□□□ 1.31
LRCH3-202ENST00000414675 WDR62O43379 1518 aa23.24■■□□□ 1.31
LRCH3-202ENST00000414675 AQRO60306 1485 aaKnown RBP eCLIP23.23■■□□□ 1.312e-6■■□□□ 12.8
LRCH3-202ENST00000414675 FHAD1B1AJZ9 1412 aa23.23■■□□□ 1.31
LRCH3-202ENST00000414675 MAP3K1Q13233 1512 aa23.23■■□□□ 1.31
LRCH3-202ENST00000414675 THOC2Q8NI27 1593 aaKnown RBP23.21■■□□□ 1.31
LRCH3-202ENST00000414675 RRBP1Q9P2E9 1410 aaKnown RBP23.21■■□□□ 1.31
LRCH3-202ENST00000414675 CFAP43Q8NDM7 1665 aa23.17■■□□□ 1.3
LRCH3-202ENST00000414675 SAMD9Q5K651 1589 aa23.15■■□□□ 1.3
LRCH3-202ENST00000414675 LRRC9Q6ZRR7 1453 aa23.15■■□□□ 1.3
LRCH3-202ENST00000414675 ZNF608Q9ULD9 1512 aaPredicted RBP23.15■■□□□ 1.3
LRCH3-202ENST00000414675 ADAMTS12P58397 1594 aa23.14■■□□□ 1.3
LRCH3-202ENST00000414675 IFT140Q96RY7 1462 aa23.14■■□□□ 1.3
LRCH3-202ENST00000414675 FYCO1Q9BQS8 1478 aa23.13■■□□□ 1.29
LRCH3-202ENST00000414675 CASKIN1Q8WXD9 1431 aa23.12■■□□□ 1.29
LRCH3-202ENST00000414675 GRIN2BQ13224 1484 aa23.11■■□□□ 1.29
LRCH3-202ENST00000414675 CCNB3Q8WWL7 1395 aa23.1■■□□□ 1.29
LRCH3-202ENST00000414675 ATP1B4Q9UN42 357 aaPredicted RBP23.09■■□□□ 1.29
LRCH3-202ENST00000414675 SNAPC4Q5SXM2 1469 aa23.07■■□□□ 1.28
LRCH3-202ENST00000414675 FMN1Q68DA7 1419 aa23.06■■□□□ 1.28
LRCH3-202ENST00000414675 PHLDB1Q86UU1 1377 aa23.04■■□□□ 1.28
LRCH3-202ENST00000414675 EIF4G3O43432 1585 aaKnown RBP23.02■■□□□ 1.27
LRCH3-202ENST00000414675 LRRIQ1Q96JM4 1722 aa23.01■■□□□ 1.27
LRCH3-202ENST00000414675 IQGAP2Q13576 1575 aa23■■□□□ 1.27
LRCH3-202ENST00000414675 ITGAEP38570 1179 aa22.95■■□□□ 1.26
LRCH3-202ENST00000414675 DHX57Q6P158 1386 aaKnown RBP22.92■■□□□ 1.26
LRCH3-202ENST00000414675 GRIN2AQ12879 1464 aa22.88■■□□□ 1.25
LRCH3-202ENST00000414675 UGGT2Q9NYU1 1516 aa22.87■■□□□ 1.25
LRCH3-202ENST00000414675 FAM50AQ14320 339 aaKnown RBP22.84■■□□□ 1.25
LRCH3-202ENST00000414675 MTUS2Q5JR59 1369 aa22.84■■□□□ 1.25
LRCH3-202ENST00000414675 KIAA0586Q9BVV6 1533 aa22.84■■□□□ 1.25
LRCH3-202ENST00000414675 MAGI1Q96QZ7 1491 aaPredicted RBP22.83■■□□□ 1.24
LRCH3-202ENST00000414675 MAGI3Q5TCQ9 1506 aa22.8■■□□□ 1.24
LRCH3-202ENST00000414675 RAB3GAP2Q9H2M9 1393 aa22.79■■□□□ 1.24
LRCH3-202ENST00000414675 HECW1Q76N89 1606 aa22.79■■□□□ 1.24
LRCH3-202ENST00000414675 DISP1Q96F81 1524 aa22.79■■□□□ 1.24
LRCH3-202ENST00000414675 CLSPNQ9HAW4 1339 aa22.79■■□□□ 1.24
LRCH3-202ENST00000414675 FGD6Q6ZV73 1430 aa22.78■■□□□ 1.24
LRCH3-202ENST00000414675 KIAA0556O60303 1618 aa22.77■■□□□ 1.24
LRCH3-202ENST00000414675 SYNJ2O15056 1496 aa22.77■■□□□ 1.24
LRCH3-202ENST00000414675 NCOA2Q15596 1464 aa22.77■■□□□ 1.24
LRCH3-202ENST00000414675 EHBP1L1Q8N3D4 1523 aa22.77■■□□□ 1.24
LRCH3-202ENST00000414675 CEP170Q5SW79 1584 aa22.76■■□□□ 1.23
LRCH3-202ENST00000414675 CCDC18Q5T9S5 1454 aa22.76■■□□□ 1.23
LRCH3-202ENST00000414675 SUPT6HQ7KZ85 1726 aaKnown RBP22.75■■□□□ 1.23
LRCH3-202ENST00000414675 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.75■■□□□ 1.23
LRCH3-202ENST00000414675 SETD5Q9C0A6 1442 aa22.74■■□□□ 1.23
LRCH3-202ENST00000414675 EPRSP07814 1512 aaKnown RBP22.74■■□□□ 1.23
LRCH3-202ENST00000414675 CHMP7Q8WUX9 453 aaPredicted RBP22.73■■□□□ 1.23
LRCH3-202ENST00000414675 CDK13Q14004 1512 aaKnown RBP22.73■■□□□ 1.23
LRCH3-202ENST00000414675 ARHGEF11O15085 1522 aa22.7■■□□□ 1.22
LRCH3-202ENST00000414675 MYOM3Q5VTT5 1437 aa22.7■■□□□ 1.22
LRCH3-202ENST00000414675 ZNF316A6NFI3 1004 aaPredicted RBP22.69■■□□□ 1.22
LRCH3-202ENST00000414675 FBLN2P98095 1184 aa22.69■■□□□ 1.22
LRCH3-202ENST00000414675 ARID3CA6NKF2 412 aa22.67■■□□□ 1.22
LRCH3-202ENST00000414675 DIEXFQ68CQ4 756 aaKnown RBP22.66■■□□□ 1.22
LRCH3-202ENST00000414675 NUP160Q12769 1436 aa22.66■■□□□ 1.22
LRCH3-202ENST00000414675 MAPKBP1O60336 1514 aa22.65■■□□□ 1.22
LRCH3-202ENST00000414675 PTPRKQ15262 1439 aa22.64■■□□□ 1.21
LRCH3-202ENST00000414675 RAPGEF6Q8TEU7 1601 aa22.61■■□□□ 1.21
LRCH3-202ENST00000414675 PTPN23Q9H3S7 1636 aa22.61■■□□□ 1.21
LRCH3-202ENST00000414675 NUP153P49790 1475 aaKnown RBP22.61■■□□□ 1.21
LRCH3-202ENST00000414675 JPH4Q96JJ6 628 aa22.55■■□□□ 1.2
LRCH3-202ENST00000414675 TCOF1Q13428 1488 aaKnown RBP22.54■■□□□ 1.2
LRCH3-202ENST00000414675 PLB1Q6P1J6 1458 aa22.52■■□□□ 1.2
LRCH3-202ENST00000414675 HFM1A2PYH4 1435 aa22.51■■□□□ 1.19
LRCH3-202ENST00000414675 CARMIL2Q6F5E8 1435 aa22.49■■□□□ 1.19
LRCH3-202ENST00000414675 NAIPQ13075 1403 aa22.48■■□□□ 1.19
LRCH3-202ENST00000414675 MIA2Q96PC5 1412 aa22.46■■□□□ 1.19
LRCH3-202ENST00000414675 CHD1O14646 1710 aa22.44■■□□□ 1.18
LRCH3-202ENST00000414675 SIN3AQ96ST3 1273 aa22.43■■□□□ 1.18
LRCH3-202ENST00000414675 PRG4Q92954 1404 aaPredicted RBP22.42■■□□□ 1.18
LRCH3-202ENST00000414675 ABCA8O94911 1581 aa22.4■■□□□ 1.18
LRCH3-202ENST00000414675 CHIC2Q9UKJ5 165 aa22.4■■□□□ 1.18
LRCH3-202ENST00000414675 TROQ12816 1431 aaPredicted RBP22.39■■□□□ 1.18
LRCH3-202ENST00000414675 CDK11AQ9UQ88 783 aaPredicted RBP22.39■■□□□ 1.17
LRCH3-202ENST00000414675 GCC2Q8IWJ2 1684 aa22.38■■□□□ 1.17
LRCH3-202ENST00000414675 UACAQ9BZF9 1416 aa22.37■■□□□ 1.17
LRCH3-202ENST00000414675 RRP7BPQ9NSQ0 103 aa22.37■■□□□ 1.17
LRCH3-202ENST00000414675 NEUROD1Q13562 356 aa22.37■■□□□ 1.17
LRCH3-202ENST00000414675 KIF14Q15058 1648 aa22.36■■□□□ 1.17
LRCH3-202ENST00000414675 ZNF644Q9H582 1327 aaPredicted RBP22.34■■□□□ 1.17
LRCH3-202ENST00000414675 KDM6BO15054 1643 aa22.34■■□□□ 1.17
LRCH3-202ENST00000414675 ADCY10Q96PN6 1610 aa22.34■■□□□ 1.17
LRCH3-202ENST00000414675 AKNAQ7Z591 1439 aa22.33■■□□□ 1.17
LRCH3-202ENST00000414675 DAPK1P53355 1430 aa22.3■■□□□ 1.16
LRCH3-202ENST00000414675 ATP10BO94823 1461 aa22.3■■□□□ 1.16
LRCH3-202ENST00000414675 DNMT1P26358 1616 aaKnown RBP22.3■■□□□ 1.16
LRCH3-202ENST00000414675 ABCC5O15440 1437 aa22.29■■□□□ 1.16
LRCH3-202ENST00000414675 GPATCH8Q9UKJ3 1502 aaKnown RBP22.28■■□□□ 1.16
LRCH3-202ENST00000414675 MIER1Q8N108 512 aa22.28■■□□□ 1.16
LRCH3-202ENST00000414675 ITSN2Q9NZM3 1697 aa22.27■■□□□ 1.16
LRCH3-202ENST00000414675 SHROOM2Q13796 1616 aa22.27■■□□□ 1.16
LRCH3-202ENST00000414675 PTPRGP23470 1445 aa22.26■■□□□ 1.15
LRCH3-202ENST00000414675 CAMSAP2Q08AD1 1489 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms