RNA–Protein interactions for RNA: ENST00000414543.5

TRIM27-203, Transcript of tripartite motif containing 27, humanhuman

TSL 3

Gene TRIM27, Length 1,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-203ENST00000414543 ARAP1Q96P48 1450 aa16.05■□□□□ 0.16
TRIM27-203ENST00000414543 TRIM26Q12899 539 aaPredicted RBP16.02■□□□□ 0.16
TRIM27-203ENST00000414543 PPARGC1BQ86YN6 1023 aaKnown RBP16.01■□□□□ 0.15
TRIM27-203ENST00000414543 CHMP7Q8WUX9 453 aaPredicted RBP16.01■□□□□ 0.15
TRIM27-203ENST00000414543 SYNJ2O15056 1496 aa16■□□□□ 0.15
TRIM27-203ENST00000414543 APLP2Q06481 763 aa16■□□□□ 0.15
TRIM27-203ENST00000414543 PCGF6Q9BYE7 350 aa16■□□□□ 0.15
TRIM27-203ENST00000414543 GRIN2AQ12879 1464 aa16■□□□□ 0.15
TRIM27-203ENST00000414543 EFCAB5A4FU69 1503 aa15.99■□□□□ 0.15
TRIM27-203ENST00000414543 FBLN2P98095 1184 aa15.98■□□□□ 0.15
TRIM27-203ENST00000414543 P3H3Q8IVL6 736 aa15.97■□□□□ 0.15
TRIM27-203ENST00000414543 IQGAP2Q13576 1575 aa15.96■□□□□ 0.15
TRIM27-203ENST00000414543 KIAA0586Q9BVV6 1533 aa15.93■□□□□ 0.14
TRIM27-203ENST00000414543 FHOD3Q2V2M9 1422 aa15.92■□□□□ 0.14
TRIM27-203ENST00000414543 SAMD9Q5K651 1589 aa15.91■□□□□ 0.14
TRIM27-203ENST00000414543 TTBK1Q5TCY1 1321 aaPredicted RBP15.9■□□□□ 0.14
TRIM27-203ENST00000414543 CEP170Q5SW79 1584 aa15.88■□□□□ 0.13
TRIM27-203ENST00000414543 NUP160Q12769 1436 aa15.87■□□□□ 0.13
TRIM27-203ENST00000414543 FMN1Q68DA7 1419 aa15.87■□□□□ 0.13
TRIM27-203ENST00000414543 UGGT2Q9NYU1 1516 aa15.87■□□□□ 0.13
TRIM27-203ENST00000414543 ATP1B4Q9UN42 357 aaPredicted RBP15.83■□□□□ 0.12
TRIM27-203ENST00000414543 CHD1O14646 1710 aa15.83■□□□□ 0.12
TRIM27-203ENST00000414543 PCF11O94913 1555 aaKnown RBP15.82■□□□□ 0.12
TRIM27-203ENST00000414543 FYCO1Q9BQS8 1478 aa15.82■□□□□ 0.12
TRIM27-203ENST00000414543 CASKIN1Q8WXD9 1431 aa15.81■□□□□ 0.12
TRIM27-203ENST00000414543 MAP3K1Q13233 1512 aa15.8■□□□□ 0.12
TRIM27-203ENST00000414543 JPH4Q96JJ6 628 aa15.8■□□□□ 0.12
TRIM27-203ENST00000414543 DISP1Q96F81 1524 aa15.78■□□□□ 0.12
TRIM27-203ENST00000414543 KIAA0556O60303 1618 aa15.78■□□□□ 0.12
TRIM27-203ENST00000414543 KANK4Q5T7N3 995 aaPredicted RBP15.78■□□□□ 0.12
TRIM27-203ENST00000414543 TIAM1Q13009 1591 aa15.77■□□□□ 0.12
TRIM27-203ENST00000414543 CARMIL2Q6F5E8 1435 aa15.76■□□□□ 0.11
TRIM27-203ENST00000414543 CFAP43Q8NDM7 1665 aa15.74■□□□□ 0.11
TRIM27-203ENST00000414543 LRRC9Q6ZRR7 1453 aa15.71■□□□□ 0.11
TRIM27-203ENST00000414543 HECW1Q76N89 1606 aa15.7■□□□□ 0.1
TRIM27-203ENST00000414543 PRG4Q92954 1404 aaPredicted RBP15.68■□□□□ 0.1
TRIM27-203ENST00000414543 CCDC18Q5T9S5 1454 aa15.67■□□□□ 0.1
TRIM27-203ENST00000414543 LRRIQ1Q96JM4 1722 aa15.66■□□□□ 0.1
TRIM27-203ENST00000414543 MTUS2Q5JR59 1369 aa15.64■□□□□ 0.1
TRIM27-203ENST00000414543 SHROOM2Q13796 1616 aa15.64■□□□□ 0.09
TRIM27-203ENST00000414543 RAPGEF6Q8TEU7 1601 aa15.64■□□□□ 0.09
TRIM27-203ENST00000414543 CLASP1Q7Z460 1538 aa15.63■□□□□ 0.09
TRIM27-203ENST00000414543 EPRSP07814 1512 aaKnown RBP15.62■□□□□ 0.09
TRIM27-203ENST00000414543 PTPRGP23470 1445 aa15.6■□□□□ 0.09
TRIM27-203ENST00000414543 NUP153P49790 1475 aaKnown RBP15.59■□□□□ 0.09
TRIM27-203ENST00000414543 PLB1Q6P1J6 1458 aa15.59■□□□□ 0.09
TRIM27-203ENST00000414543 CDK13Q14004 1512 aaKnown RBP15.58■□□□□ 0.09
TRIM27-203ENST00000414543 EHBP1L1Q8N3D4 1523 aa15.58■□□□□ 0.09
TRIM27-203ENST00000414543 RRBP1Q9P2E9 1410 aaKnown RBP15.58■□□□□ 0.09
TRIM27-203ENST00000414543 ARID3CA6NKF2 412 aa15.58■□□□□ 0.08
TRIM27-203ENST00000414543 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.57■□□□□ 0.08
TRIM27-203ENST00000414543 HNRNPUL2Q1KMD3 747 aaKnown RBP15.57■□□□□ 0.08
TRIM27-203ENST00000414543 PHLDB1Q86UU1 1377 aa15.56■□□□□ 0.08
TRIM27-203ENST00000414543 CCNB3Q8WWL7 1395 aa15.56■□□□□ 0.08
TRIM27-203ENST00000414543 ABCA8O94911 1581 aa15.55■□□□□ 0.08
TRIM27-203ENST00000414543 OSCARQ8IYS5 282 aa15.55■□□□□ 0.08
TRIM27-203ENST00000414543 CDK11AQ9UQ88 783 aaPredicted RBP15.55■□□□□ 0.08
TRIM27-203ENST00000414543 SUPT6HQ7KZ85 1726 aaKnown RBP15.55■□□□□ 0.08
TRIM27-203ENST00000414543 MAGI3Q5TCQ9 1506 aa15.53■□□□□ 0.08
TRIM27-203ENST00000414543 ERCC6L2Q5T890 1561 aa15.53■□□□□ 0.08
TRIM27-203ENST00000414543 NCOA2Q15596 1464 aa15.52■□□□□ 0.08
TRIM27-203ENST00000414543 HRCP23327 699 aa15.5■□□□□ 0.07
TRIM27-203ENST00000414543 UACAQ9BZF9 1416 aa15.49■□□□□ 0.07
TRIM27-203ENST00000414543 FAM50AQ14320 339 aaKnown RBP15.47■□□□□ 0.07
TRIM27-203ENST00000414543 ATP10BO94823 1461 aa15.47■□□□□ 0.07
TRIM27-203ENST00000414543 MYOM3Q5VTT5 1437 aa15.46■□□□□ 0.07
TRIM27-203ENST00000414543 ARHGEF11O15085 1522 aa15.46■□□□□ 0.07
TRIM27-203ENST00000414543 FGD6Q6ZV73 1430 aa15.46■□□□□ 0.07
TRIM27-203ENST00000414543 PLEKHD1A6NEE1 506 aa15.45■□□□□ 0.06
TRIM27-203ENST00000414543 TROQ12816 1431 aaPredicted RBP15.45■□□□□ 0.06
TRIM27-203ENST00000414543 ITGAEP38570 1179 aa15.45■□□□□ 0.06
TRIM27-203ENST00000414543 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.44■□□□□ 0.065e-6■■■□□ 14.8
TRIM27-203ENST00000414543 ABCC2Q92887 1545 aa15.43■□□□□ 0.06
TRIM27-203ENST00000414543 CCER1Q8TC90 406 aaPredicted RBP15.4■□□□□ 0.06
TRIM27-203ENST00000414543 UHRF1BP1LA0JNW5 1464 aa15.39■□□□□ 0.05
TRIM27-203ENST00000414543 ADCY10Q96PN6 1610 aa15.39■□□□□ 0.05
TRIM27-203ENST00000414543 ZEB1P37275 1124 aaPredicted RBP15.38■□□□□ 0.05
TRIM27-203ENST00000414543 MIA2Q96PC5 1412 aa15.38■□□□□ 0.05
TRIM27-203ENST00000414543 PTPN23Q9H3S7 1636 aa15.38■□□□□ 0.05
TRIM27-203ENST00000414543 KIF14Q15058 1648 aa15.36■□□□□ 0.05
TRIM27-203ENST00000414543 TCOF1Q13428 1488 aaKnown RBP15.35■□□□□ 0.05
TRIM27-203ENST00000414543 ITSN2Q9NZM3 1697 aa15.34■□□□□ 0.05
TRIM27-203ENST00000414543 KDM5BQ9UGL1 1544 aa15.33■□□□□ 0.05
TRIM27-203ENST00000414543 ZCCHC11Q5TAX3 1644 aaKnown RBP15.32■□□□□ 0.04
TRIM27-203ENST00000414543 CFDP1Q9UEE9 299 aaPredicted RBP15.31■□□□□ 0.04
TRIM27-203ENST00000414543 GPATCH8Q9UKJ3 1502 aaKnown RBP15.3■□□□□ 0.04
TRIM27-203ENST00000414543 ABCC10Q5T3U5 1492 aa15.3■□□□□ 0.04
TRIM27-203ENST00000414543 SETD5Q9C0A6 1442 aa15.29■□□□□ 0.04
TRIM27-203ENST00000414543 CDC42BPAQ5VT25 1732 aa15.27■□□□□ 0.03
TRIM27-203ENST00000414543 KCNH8Q96L42 1107 aa15.26■□□□□ 0.03
TRIM27-203ENST00000414543 ZNF777Q9ULD5 760 aaPredicted RBP15.26■□□□□ 0.03
TRIM27-203ENST00000414543 RAB3GAP2Q9H2M9 1393 aa15.26■□□□□ 0.03
TRIM27-203ENST00000414543 PTPRKQ15262 1439 aa15.25■□□□□ 0.03
TRIM27-203ENST00000414543 NPM1P06748 294 aaKnown RBP eCLIP15.25■□□□□ 0.03
TRIM27-203ENST00000414543 ZNF644Q9H582 1327 aaPredicted RBP15.25■□□□□ 0.03
TRIM27-203ENST00000414543 CAMSAP2Q08AD1 1489 aa15.24■□□□□ 0.03
TRIM27-203ENST00000414543 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.22■□□□□ 0.03
TRIM27-203ENST00000414543 DAPK1P53355 1430 aa15.22■□□□□ 0.03
TRIM27-203ENST00000414543 DNMT1P26358 1616 aaKnown RBP15.22■□□□□ 0.03
TRIM27-203ENST00000414543 CHIC2Q9UKJ5 165 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms