RNA–Protein interactions for RNA: ENST00000414301.5

SEMA3F-203, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 936 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-203ENST00000414301 CARMIL1Q5VZK9 1371 aa27.61■■■□□ 2.01
SEMA3F-203ENST00000414301 KIAA0586Q9BVV6 1533 aa27.58■■■□□ 2.01
SEMA3F-203ENST00000414301 NPM1P06748 294 aaKnown RBP eCLIP27.54■■■□□ 2
SEMA3F-203ENST00000414301 RUSC2Q8N2Y8 1516 aa27.54■■■□□ 2
SEMA3F-203ENST00000414301 CUL7Q14999 1698 aa27.53■■■□□ 2
SEMA3F-203ENST00000414301 TTBK1Q5TCY1 1321 aaPredicted RBP27.4■■□□□ 1.98
SEMA3F-203ENST00000414301 PTPRGP23470 1445 aa27.37■■□□□ 1.97
SEMA3F-203ENST00000414301 CARMIL2Q6F5E8 1435 aa27.35■■□□□ 1.97
SEMA3F-203ENST00000414301 FAM69CQ0P6D2 419 aa27.35■■□□□ 1.97
SEMA3F-203ENST00000414301 RAPGEF2Q9Y4G8 1499 aa27.32■■□□□ 1.96
SEMA3F-203ENST00000414301 TNIKQ9UKE5 1360 aa27.3■■□□□ 1.96
SEMA3F-203ENST00000414301 ADCY10Q96PN6 1610 aa27.25■■□□□ 1.95
SEMA3F-203ENST00000414301 IQGAP2Q13576 1575 aa27.25■■□□□ 1.95
SEMA3F-203ENST00000414301 ABCC10Q5T3U5 1492 aa27.24■■□□□ 1.95
SEMA3F-203ENST00000414301 MAPKBP1O60336 1514 aa27.21■■□□□ 1.95
SEMA3F-203ENST00000414301 KIF13AQ9H1H9 1805 aa27.16■■□□□ 1.94
SEMA3F-203ENST00000414301 AEBP2Q6ZN18 517 aaPredicted RBP27.15■■□□□ 1.94
SEMA3F-203ENST00000414301 DISP1Q96F81 1524 aa27.15■■□□□ 1.94
SEMA3F-203ENST00000414301 UACAQ9BZF9 1416 aa27.11■■□□□ 1.93
SEMA3F-203ENST00000414301 UGGT2Q9NYU1 1516 aa27.11■■□□□ 1.93
SEMA3F-203ENST00000414301 ABCC2Q92887 1545 aa27.1■■□□□ 1.93
SEMA3F-203ENST00000414301 DIP2BQ9P265 1576 aa27.07■■□□□ 1.92
SEMA3F-203ENST00000414301 UHRF1BP1LA0JNW5 1464 aa27.06■■□□□ 1.92
SEMA3F-203ENST00000414301 PRXQ9BXM0 1461 aa27.06■■□□□ 1.92
SEMA3F-203ENST00000414301 CSRNP3Q8WYN3 585 aa27.05■■□□□ 1.92
SEMA3F-203ENST00000414301 ASXL2Q76L83 1435 aa27.02■■□□□ 1.92
SEMA3F-203ENST00000414301 PLB1Q6P1J6 1458 aa27.01■■□□□ 1.91
SEMA3F-203ENST00000414301 KIAA0556O60303 1618 aa26.98■■□□□ 1.91
SEMA3F-203ENST00000414301 GOLGA3Q08378 1498 aa26.97■■□□□ 1.91
SEMA3F-203ENST00000414301 FAM9AQ8IZU1 332 aaPredicted RBP26.96■■□□□ 1.91
SEMA3F-203ENST00000414301 KDM5BQ9UGL1 1544 aa26.94■■□□□ 1.9
SEMA3F-203ENST00000414301 P3H3Q8IVL6 736 aa26.9■■□□□ 1.9
SEMA3F-203ENST00000414301 CTTNBP2Q8WZ74 1663 aa26.89■■□□□ 1.89
SEMA3F-203ENST00000414301 TSPOAP1O95153 1857 aa26.87■■□□□ 1.89
SEMA3F-203ENST00000414301 GLI2P10070 1586 aa26.85■■□□□ 1.89
SEMA3F-203ENST00000414301 EEA1Q15075 1411 aa26.83■■□□□ 1.89
SEMA3F-203ENST00000414301 EPRSP07814 1512 aaKnown RBP26.83■■□□□ 1.89
SEMA3F-203ENST00000414301 KDM6BO15054 1643 aa26.83■■□□□ 1.88
SEMA3F-203ENST00000414301 KCNH8Q96L42 1107 aa26.82■■□□□ 1.88
SEMA3F-203ENST00000414301 ZCCHC11Q5TAX3 1644 aaKnown RBP26.79■■□□□ 1.88
SEMA3F-203ENST00000414301 RANGAP1P46060 587 aaPredicted RBP26.77■■□□□ 1.88
SEMA3F-203ENST00000414301 WDR7Q9Y4E6 1490 aa26.75■■□□□ 1.87
SEMA3F-203ENST00000414301 ABCA8O94911 1581 aa26.75■■□□□ 1.87
SEMA3F-203ENST00000414301 ARID3CA6NKF2 412 aa26.74■■□□□ 1.87
SEMA3F-203ENST00000414301 TEX14Q8IWB6 1497 aa26.68■■□□□ 1.86
SEMA3F-203ENST00000414301 CHIC1Q5VXU3 224 aa26.68■■□□□ 1.86
SEMA3F-203ENST00000414301 KDM4FA0A1W2PPD8 638 aa26.66■■□□□ 1.86
SEMA3F-203ENST00000414301 PPRC1Q5VV67 1664 aaKnown RBP26.66■■□□□ 1.86
SEMA3F-203ENST00000414301 CD109Q6YHK3 1445 aa26.65■■□□□ 1.86
SEMA3F-203ENST00000414301 MAP3K4Q9Y6R4 1608 aa26.65■■□□□ 1.86
SEMA3F-203ENST00000414301 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.64■■□□□ 1.86
SEMA3F-203ENST00000414301 HNRNPUL2Q1KMD3 747 aaKnown RBP26.64■■□□□ 1.86
SEMA3F-203ENST00000414301 ATP10BO94823 1461 aa26.63■■□□□ 1.85
SEMA3F-203ENST00000414301 COL17A1Q9UMD9 1497 aaPredicted RBP26.63■■□□□ 1.85
SEMA3F-203ENST00000414301 EHMT2Q96KQ7 1210 aa26.59■■□□□ 1.85
SEMA3F-203ENST00000414301 SAMD9Q5K651 1589 aa26.58■■□□□ 1.85
SEMA3F-203ENST00000414301 UBTFP17480 764 aaKnown RBP26.57■■□□□ 1.84
SEMA3F-203ENST00000414301 MAGI3Q5TCQ9 1506 aa26.55■■□□□ 1.84
SEMA3F-203ENST00000414301 FHOD3Q2V2M9 1422 aa26.54■■□□□ 1.84
SEMA3F-203ENST00000414301 KIF21BO75037 1637 aa26.49■■□□□ 1.83
SEMA3F-203ENST00000414301 PLEKHD1A6NEE1 506 aa26.48■■□□□ 1.83
SEMA3F-203ENST00000414301 CFAP43Q8NDM7 1665 aa26.47■■□□□ 1.83
SEMA3F-203ENST00000414301 RAPGEF6Q8TEU7 1601 aa26.47■■□□□ 1.83
SEMA3F-203ENST00000414301 NUP153P49790 1475 aaKnown RBP26.44■■□□□ 1.82
SEMA3F-203ENST00000414301 EFCAB5A4FU69 1503 aa26.39■■□□□ 1.82
SEMA3F-203ENST00000414301 PHLDB1Q86UU1 1377 aa26.39■■□□□ 1.82
SEMA3F-203ENST00000414301 ATP1B4Q9UN42 357 aaPredicted RBP26.37■■□□□ 1.81
SEMA3F-203ENST00000414301 ADGRL1O94910 1474 aa26.36■■□□□ 1.81
SEMA3F-203ENST00000414301 ARAP3Q8WWN8 1544 aa26.34■■□□□ 1.81
SEMA3F-203ENST00000414301 ABCA9Q8IUA7 1624 aa26.33■■□□□ 1.81
SEMA3F-203ENST00000414301 RAPGEF3O95398 923 aa26.32■■□□□ 1.8
SEMA3F-203ENST00000414301 NEO1Q92859 1461 aa26.27■■□□□ 1.8
SEMA3F-203ENST00000414301 FMN1Q68DA7 1419 aa26.26■■□□□ 1.79
SEMA3F-203ENST00000414301 CDK11AQ9UQ88 783 aaPredicted RBP26.24■■□□□ 1.79
SEMA3F-203ENST00000414301 ARHGAP35Q9NRY4 1499 aa26.23■■□□□ 1.79
SEMA3F-203ENST00000414301 CDK13Q14004 1512 aaKnown RBP26.18■■□□□ 1.78
SEMA3F-203ENST00000414301 AKNAQ7Z591 1439 aa26.16■■□□□ 1.78
SEMA3F-203ENST00000414301 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.14■■□□□ 1.78
SEMA3F-203ENST00000414301 FANCAO15360 1455 aa26.13■■□□□ 1.77
SEMA3F-203ENST00000414301 ARID4BQ4LE39 1312 aaPredicted RBP26.13■■□□□ 1.77
SEMA3F-203ENST00000414301 DENND4BO75064 1496 aaPredicted RBP26.12■■□□□ 1.77
SEMA3F-203ENST00000414301 PLCH2O75038 1416 aa26.08■■□□□ 1.77
SEMA3F-203ENST00000414301 HECW1Q76N89 1606 aa26.08■■□□□ 1.77
SEMA3F-203ENST00000414301 EFCAB2Q5VUJ9 269 aa26.08■■□□□ 1.77
SEMA3F-203ENST00000414301 TTC37Q6PGP7 1564 aa26.05■■□□□ 1.76
SEMA3F-203ENST00000414301 SCAPERQ9BY12 1400 aa26.02■■□□□ 1.76
SEMA3F-203ENST00000414301 TROQ12816 1431 aaPredicted RBP26.01■■□□□ 1.75
SEMA3F-203ENST00000414301 FRMPD1Q5SYB0 1578 aa26.01■■□□□ 1.75
SEMA3F-203ENST00000414301 CFAP74Q9C0B2 1584 aa26■■□□□ 1.75
SEMA3F-203ENST00000414301 CLIP1P30622 1438 aa25.99■■□□□ 1.75
SEMA3F-203ENST00000414301 CASKIN1Q8WXD9 1431 aa25.97■■□□□ 1.75
SEMA3F-203ENST00000414301 RICTORQ6R327 1708 aa25.92■■□□□ 1.74
SEMA3F-203ENST00000414301 PTPRMP28827 1452 aa25.91■■□□□ 1.74
SEMA3F-203ENST00000414301 MAGI2Q86UL8 1455 aa25.91■■□□□ 1.74
SEMA3F-203ENST00000414301 YEATS2Q9ULM3 1422 aa25.9■■□□□ 1.74
SEMA3F-203ENST00000414301 CCDC18Q5T9S5 1454 aa25.9■■□□□ 1.74
SEMA3F-203ENST00000414301 HECW2Q9P2P5 1572 aa25.9■■□□□ 1.74
SEMA3F-203ENST00000414301 POGZQ7Z3K3 1410 aa25.89■■□□□ 1.74
SEMA3F-203ENST00000414301 KIF14Q15058 1648 aa25.89■■□□□ 1.74
SEMA3F-203ENST00000414301 AFAP1Q8N556 730 aa25.89■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms