RNA–Protein interactions for RNA: ENST00000413689.5

SCN5A-203, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN5A, Length 8,504 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-203ENST00000413689 GOLGA6L6A8MZA4 724 aa13.64□□□□□ -0.23
SCN5A-203ENST00000413689 MYH16Q9H6N6 1097 aa13.64□□□□□ -0.23
SCN5A-203ENST00000413689 CHAF1AQ13111 956 aaPredicted RBP13.64□□□□□ -0.23
SCN5A-203ENST00000413689 PTMAP06454 111 aaKnown RBP13.63□□□□□ -0.23
SCN5A-203ENST00000413689 ZRSR1Q15695 479 aaKnown RBP13.63□□□□□ -0.23
SCN5A-203ENST00000413689 NOP58Q9Y2X3 529 aaKnown RBP13.62□□□□□ -0.23
SCN5A-203ENST00000413689 CEP162Q5TB80 1403 aa13.62□□□□□ -0.23
SCN5A-203ENST00000413689 EIF4G2P78344 907 aaKnown RBP eCLIP13.62□□□□□ -0.23
SCN5A-203ENST00000413689 SUPT16HQ9Y5B9 1047 aaKnown RBP13.61□□□□□ -0.23
SCN5A-203ENST00000413689 GOLGA3Q08378 1498 aa13.6□□□□□ -0.23
SCN5A-203ENST00000413689 NRDCO43847 1150 aa13.6□□□□□ -0.23
SCN5A-203ENST00000413689 HIRIP3Q9BW71 556 aaPredicted RBP13.59□□□□□ -0.23
SCN5A-203ENST00000413689 EEA1Q15075 1411 aa13.57□□□□□ -0.24
SCN5A-203ENST00000413689 MTUS2Q5JR59 1369 aa13.56□□□□□ -0.24
SCN5A-203ENST00000413689 RTN4Q9NQC3 1192 aaKnown RBP13.56□□□□□ -0.24
SCN5A-203ENST00000413689 CASC1Q6TDU7 716 aa13.54□□□□□ -0.24
SCN5A-203ENST00000413689 PPP4R2Q9NY27 417 aa13.54□□□□□ -0.24
SCN5A-203ENST00000413689 CHIC2Q9UKJ5 165 aa13.53□□□□□ -0.24
SCN5A-203ENST00000413689 L1TD1Q5T7N2 865 aaKnown RBP13.53□□□□□ -0.24
SCN5A-203ENST00000413689 LAS1LQ9Y4W2 734 aaKnown RBP13.5□□□□□ -0.25
SCN5A-203ENST00000413689 MSNP26038 577 aaKnown RBP13.49□□□□□ -0.25
SCN5A-203ENST00000413689 RB1CC1Q8TDY2 1594 aa13.49□□□□□ -0.25
SCN5A-203ENST00000413689 KDM2AQ9Y2K7 1162 aa13.49□□□□□ -0.25
SCN5A-203ENST00000413689 DEKP35659 375 aaKnown RBP13.48□□□□□ -0.25
SCN5A-203ENST00000413689 PTMSP20962 102 aa13.46□□□□□ -0.25
SCN5A-203ENST00000413689 RBM19Q9Y4C8 960 aaKnown RBP13.46□□□□□ -0.26
SCN5A-203ENST00000413689 CEP164Q9UPV0 1460 aa13.45□□□□□ -0.26
SCN5A-203ENST00000413689 CHGAP10645 457 aaKnown RBP13.45□□□□□ -0.26
SCN5A-203ENST00000413689 RSF1Q96T23 1441 aaPredicted RBP13.44□□□□□ -0.26
SCN5A-203ENST00000413689 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.43□□□□□ -0.26
SCN5A-203ENST00000413689 STAG3Q9UJ98 1225 aa13.43□□□□□ -0.26
SCN5A-203ENST00000413689 FTSJ3Q8IY81 847 aaKnown RBP13.43□□□□□ -0.26
SCN5A-203ENST00000413689 USP35Q9P2H5 1018 aa13.43□□□□□ -0.26
SCN5A-203ENST00000413689 B4GALNT3Q6L9W6 998 aa13.41□□□□□ -0.26
SCN5A-203ENST00000413689 KAT6BQ8WYB5 2073 aa13.41□□□□□ -0.26
SCN5A-203ENST00000413689 TSPY4P0CV99 314 aa13.41□□□□□ -0.26
SCN5A-203ENST00000413689 TSPY10P0CW01 314 aa13.41□□□□□ -0.26
SCN5A-203ENST00000413689 TNNT3P45378 269 aaPredicted RBP13.41□□□□□ -0.26
SCN5A-203ENST00000413689 ESF1Q9H501 851 aaKnown RBP13.4□□□□□ -0.26
SCN5A-203ENST00000413689 TNIKQ9UKE5 1360 aa13.38□□□□□ -0.27
SCN5A-203ENST00000413689 KNSTRNQ9Y448 316 aa13.38□□□□□ -0.27
SCN5A-203ENST00000413689 ARID4BQ4LE39 1312 aaPredicted RBP13.38□□□□□ -0.27
SCN5A-203ENST00000413689 RRP7BPQ9NSQ0 103 aa13.38□□□□□ -0.27
SCN5A-203ENST00000413689 CHMP4BQ9H444 224 aaKnown RBP13.36□□□□□ -0.27
SCN5A-203ENST00000413689 RGS3P49796 1198 aa13.36□□□□□ -0.27
SCN5A-203ENST00000413689 CFAP44Q96MT7 982 aa13.36□□□□□ -0.27
SCN5A-203ENST00000413689 CDCA8Q53HL2 280 aa13.34□□□□□ -0.27
SCN5A-203ENST00000413689 CCER2I3L3R5 266 aa13.33□□□□□ -0.28
SCN5A-203ENST00000413689 HSP90AB1P08238 724 aaKnown RBP13.32□□□□□ -0.28
SCN5A-203ENST00000413689 CCNB3Q8WWL7 1395 aa13.32□□□□□ -0.28
SCN5A-203ENST00000413689 SENP3-EIF4A1A0A087X0R7 540 aa13.31□□□□□ -0.28
SCN5A-203ENST00000413689 WRNQ14191 1432 aaPredicted RBP eCLIP13.3□□□□□ -0.28
SCN5A-203ENST00000413689 CFAP53Q96M91 514 aa13.3□□□□□ -0.28
SCN5A-203ENST00000413689 SETQ01105 290 aaPredicted RBP13.29□□□□□ -0.28
SCN5A-203ENST00000413689 KIAA2012Q0VF49 1180 aa13.29□□□□□ -0.28
SCN5A-203ENST00000413689 HSCBQ8IWL3 235 aa13.29□□□□□ -0.28
SCN5A-203ENST00000413689 GOLGA6L1Q8N7Z2 621 aa13.29□□□□□ -0.28
SCN5A-203ENST00000413689 CALRP27797 417 aaKnown RBP13.28□□□□□ -0.28
SCN5A-203ENST00000413689 RSPH6AQ9H0K4 717 aa13.28□□□□□ -0.28
SCN5A-203ENST00000413689 KIF27Q86VH2 1401 aa13.27□□□□□ -0.28
SCN5A-203ENST00000413689 CARD11Q9BXL7 1154 aa13.27□□□□□ -0.28
SCN5A-203ENST00000413689 FHAD1B1AJZ9 1412 aa13.27□□□□□ -0.29
SCN5A-203ENST00000413689 NACADO15069 1562 aa13.26□□□□□ -0.29
SCN5A-203ENST00000413689 MS4A1P11836 297 aa13.26□□□□□ -0.29
SCN5A-203ENST00000413689 PNNQ9H307 717 aaKnown RBP13.26□□□□□ -0.29
SCN5A-203ENST00000413689 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.25□□□□□ -0.29
SCN5A-203ENST00000413689 BAZ1AQ9NRL2 1556 aaPredicted RBP13.25□□□□□ -0.29
SCN5A-203ENST00000413689 PLCB2Q00722 1185 aa13.24□□□□□ -0.29
SCN5A-203ENST00000413689 TIMELESSQ9UNS1 1208 aa13.24□□□□□ -0.29
SCN5A-203ENST00000413689 TPRNQ4KMQ1 711 aa13.24□□□□□ -0.29
SCN5A-203ENST00000413689 FRAT1Q92837 279 aaPredicted RBP13.23□□□□□ -0.29
SCN5A-203ENST00000413689 TSHZ2Q9NRE2 1034 aa13.23□□□□□ -0.29
SCN5A-203ENST00000413689 DRC7Q8IY82 874 aa13.23□□□□□ -0.29
SCN5A-203ENST00000413689 SYAP1Q96A49 352 aaPredicted RBP13.23□□□□□ -0.29
SCN5A-203ENST00000413689 GOLGA6L4A6NEF3 574 aa13.22□□□□□ -0.29
SCN5A-203ENST00000413689 SIN3AQ96ST3 1273 aa13.22□□□□□ -0.29
SCN5A-203ENST00000413689 RGL3Q3MIN7 710 aa13.22□□□□□ -0.29
SCN5A-203ENST00000413689 BAZ1BQ9UIG0 1483 aaKnown RBP13.21□□□□□ -0.29
SCN5A-203ENST00000413689 HSP90AA2PQ14568 343 aaPredicted RBP13.21□□□□□ -0.3
SCN5A-203ENST00000413689 IPO9Q96P70 1041 aaKnown RBP13.2□□□□□ -0.3
SCN5A-203ENST00000413689 GBP4Q96PP9 640 aa13.2□□□□□ -0.3
SCN5A-203ENST00000413689 AMER1Q5JTC6 1135 aaPredicted RBP13.2□□□□□ -0.3
SCN5A-203ENST00000413689 SETD5Q9C0A6 1442 aa13.19□□□□□ -0.3
SCN5A-203ENST00000413689 MAPK8IP3Q9UPT6 1336 aa13.19□□□□□ -0.3
SCN5A-203ENST00000413689 ARHGAP35Q9NRY4 1499 aa13.18□□□□□ -0.3
SCN5A-203ENST00000413689 NEUROD2Q15784 382 aa13.18□□□□□ -0.3
SCN5A-203ENST00000413689 VPS8Q8N3P4 1428 aa13.18□□□□□ -0.3
SCN5A-203ENST00000413689 TCERG1O14776 1098 aaKnown RBP13.18□□□□□ -0.3
SCN5A-203ENST00000413689 NPM1P06748 294 aaKnown RBP eCLIP13.18□□□□□ -0.3
SCN5A-203ENST00000413689 MCCP23508 829 aa13.18□□□□□ -0.3
SCN5A-203ENST00000413689 NOC3LQ8WTT2 800 aaKnown RBP13.17□□□□□ -0.3
SCN5A-203ENST00000413689 ABCC8Q09428 1581 aa13.17□□□□□ -0.3
SCN5A-203ENST00000413689 CC2D1BQ5T0F9 858 aaKnown RBP13.16□□□□□ -0.3
SCN5A-203ENST00000413689 CFDP1Q9UEE9 299 aaPredicted RBP13.15□□□□□ -0.3
SCN5A-203ENST00000413689 CHMP7Q8WUX9 453 aaPredicted RBP13.15□□□□□ -0.3
SCN5A-203ENST00000413689 PHF14O94880 888 aa13.15□□□□□ -0.3
SCN5A-203ENST00000413689 A0A0U1RQG5 324 aaPredicted RBP13.15□□□□□ -0.3
SCN5A-203ENST00000413689 SPRYD3Q8NCJ5 442 aa13.15□□□□□ -0.3
SCN5A-203ENST00000413689 GZF1Q9H116 711 aaPredicted RBP13.14□□□□□ -0.31
SCN5A-203ENST00000413689 NUDCQ9Y266 331 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms