RNA–Protein interactions for RNA: ENST00000412685.6

HCG18-233, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 2,552 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-233ENST00000412685 EFCAB5A4FU69 1503 aa24.58■■□□□ 1.53
HCG18-233ENST00000412685 CCNB3Q8WWL7 1395 aa24.58■■□□□ 1.53
HCG18-233ENST00000412685 GAPVD1Q14C86 1478 aa24.57■■□□□ 1.52
HCG18-233ENST00000412685 P3H3Q8IVL6 736 aa24.56■■□□□ 1.52
HCG18-233ENST00000412685 PCF11O94913 1555 aaKnown RBP24.54■■□□□ 1.52
HCG18-233ENST00000412685 FHOD3Q2V2M9 1422 aa24.53■■□□□ 1.52
HCG18-233ENST00000412685 LRRC9Q6ZRR7 1453 aa24.53■■□□□ 1.52
HCG18-233ENST00000412685 TARBP1Q13395 1621 aaKnown RBP24.5■■□□□ 1.51
HCG18-233ENST00000412685 CFAP43Q8NDM7 1665 aa24.49■■□□□ 1.51
HCG18-233ENST00000412685 DIEXFQ68CQ4 756 aaKnown RBP24.47■■□□□ 1.51
HCG18-233ENST00000412685 FYCO1Q9BQS8 1478 aa24.47■■□□□ 1.51
HCG18-233ENST00000412685 DHX57Q6P158 1386 aaKnown RBP24.45■■□□□ 1.51
HCG18-233ENST00000412685 AQRO60306 1485 aaKnown RBP eCLIP24.45■■□□□ 1.5
HCG18-233ENST00000412685 CLSPNQ9HAW4 1339 aa24.45■■□□□ 1.5
HCG18-233ENST00000412685 CASKIN1Q8WXD9 1431 aa24.45■■□□□ 1.5
HCG18-233ENST00000412685 ZNF316A6NFI3 1004 aaPredicted RBP24.43■■□□□ 1.5
HCG18-233ENST00000412685 ATP1B4Q9UN42 357 aaPredicted RBP24.42■■□□□ 1.5
HCG18-233ENST00000412685 MRC2Q9UBG0 1479 aa24.41■■□□□ 1.5
HCG18-233ENST00000412685 PHLDB1Q86UU1 1377 aa24.4■■□□□ 1.5
HCG18-233ENST00000412685 FMN1Q68DA7 1419 aa24.4■■□□□ 1.5
HCG18-233ENST00000412685 ITGAEP38570 1179 aa24.38■■□□□ 1.49
HCG18-233ENST00000412685 SAMD9Q5K651 1589 aa24.37■■□□□ 1.49
HCG18-233ENST00000412685 SNAPC4Q5SXM2 1469 aa24.34■■□□□ 1.49
HCG18-233ENST00000412685 PBRM1Q86U86 1689 aa24.33■■□□□ 1.49
HCG18-233ENST00000412685 RAB3GAP2Q9H2M9 1393 aa24.26■■□□□ 1.47
HCG18-233ENST00000412685 FAM50AQ14320 339 aaKnown RBP24.26■■□□□ 1.47
HCG18-233ENST00000412685 ADAMTS12P58397 1594 aa24.25■■□□□ 1.47
HCG18-233ENST00000412685 GRIN2BQ13224 1484 aa24.23■■□□□ 1.47
HCG18-233ENST00000412685 WDR62O43379 1518 aa24.23■■□□□ 1.47
HCG18-233ENST00000412685 IFT140Q96RY7 1462 aa24.22■■□□□ 1.47
HCG18-233ENST00000412685 SETD5Q9C0A6 1442 aa24.21■■□□□ 1.47
HCG18-233ENST00000412685 THOC2Q8NI27 1593 aaKnown RBP24.19■■□□□ 1.46
HCG18-233ENST00000412685 MTUS2Q5JR59 1369 aa24.19■■□□□ 1.46
HCG18-233ENST00000412685 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.19■■□□□ 1.46
HCG18-233ENST00000412685 LRRIQ1Q96JM4 1722 aa24.18■■□□□ 1.46
HCG18-233ENST00000412685 IQGAP2Q13576 1575 aa24.17■■□□□ 1.46
HCG18-233ENST00000412685 ZNF608Q9ULD9 1512 aaPredicted RBP24.17■■□□□ 1.46
HCG18-233ENST00000412685 FGD6Q6ZV73 1430 aa24.14■■□□□ 1.46
HCG18-233ENST00000412685 MAPKBP1O60336 1514 aa24.11■■□□□ 1.45
HCG18-233ENST00000412685 EHBP1L1Q8N3D4 1523 aa24.08■■□□□ 1.44
HCG18-233ENST00000412685 NCOA2Q15596 1464 aa24.08■■□□□ 1.44
HCG18-233ENST00000412685 ERCC6Q03468 1493 aa24.07■■□□□ 1.44
HCG18-233ENST00000412685 CCDC18Q5T9S5 1454 aa24.06■■□□□ 1.44
HCG18-233ENST00000412685 SUPT6HQ7KZ85 1726 aaKnown RBP24.05■■□□□ 1.44
HCG18-233ENST00000412685 UGGT2Q9NYU1 1516 aa24.04■■□□□ 1.44
HCG18-233ENST00000412685 HECW1Q76N89 1606 aa24.04■■□□□ 1.44
HCG18-233ENST00000412685 MYOM3Q5VTT5 1437 aa24.03■■□□□ 1.44
HCG18-233ENST00000412685 EIF4G3O43432 1585 aaKnown RBP24.03■■□□□ 1.44
HCG18-233ENST00000412685 MAGI3Q5TCQ9 1506 aa24.01■■□□□ 1.43
HCG18-233ENST00000412685 SCAF1Q9H7N4 1312 aaKnown RBP24■■□□□ 1.43
HCG18-233ENST00000412685 KIAA0586Q9BVV6 1533 aa23.99■■□□□ 1.43
HCG18-233ENST00000412685 ACIN1Q9UKV3 1341 aaKnown RBP23.99■■□□□ 1.43
HCG18-233ENST00000412685 ARHGEF11O15085 1522 aa23.98■■□□□ 1.43
HCG18-233ENST00000412685 EPRSP07814 1512 aaKnown RBP23.98■■□□□ 1.43
HCG18-233ENST00000412685 MIER1Q8N108 512 aa23.98■■□□□ 1.43
HCG18-233ENST00000412685 GRIN2AQ12879 1464 aa23.97■■□□□ 1.43
HCG18-233ENST00000412685 CENPBP07199 599 aaPredicted RBP23.96■■□□□ 1.43
HCG18-233ENST00000412685 NEUROD1Q13562 356 aa23.96■■□□□ 1.43
HCG18-233ENST00000412685 PTPRKQ15262 1439 aa23.95■■□□□ 1.42
HCG18-233ENST00000412685 PELP1Q8IZL8 1130 aaKnown RBP23.94■■□□□ 1.42
HCG18-233ENST00000412685 DISP1Q96F81 1524 aa23.92■■□□□ 1.42
HCG18-233ENST00000412685 HFM1A2PYH4 1435 aa23.92■■□□□ 1.42
HCG18-233ENST00000412685 KIAA0556O60303 1618 aa23.92■■□□□ 1.42
HCG18-233ENST00000412685 MAGI1Q96QZ7 1491 aaPredicted RBP23.91■■□□□ 1.42
HCG18-233ENST00000412685 PTPN23Q9H3S7 1636 aa23.91■■□□□ 1.42
HCG18-233ENST00000412685 CDK13Q14004 1512 aaKnown RBP23.91■■□□□ 1.42
HCG18-233ENST00000412685 SIN3AQ96ST3 1273 aa23.87■■□□□ 1.41
HCG18-233ENST00000412685 TCOF1Q13428 1488 aaKnown RBP23.85■■□□□ 1.41
HCG18-233ENST00000412685 SYNJ2O15056 1496 aa23.84■■□□□ 1.41
HCG18-233ENST00000412685 NAIPQ13075 1403 aa23.84■■□□□ 1.41
HCG18-233ENST00000412685 ARID3CA6NKF2 412 aa23.83■■□□□ 1.41
HCG18-233ENST00000412685 CHMP7Q8WUX9 453 aaPredicted RBP23.83■■□□□ 1.41
HCG18-233ENST00000412685 TIMELESSQ9UNS1 1208 aa23.82■■□□□ 1.4
HCG18-233ENST00000412685 UACAQ9BZF9 1416 aa23.81■■□□□ 1.4
HCG18-233ENST00000412685 CEP170Q5SW79 1584 aa23.81■■□□□ 1.4
HCG18-233ENST00000412685 MIA2Q96PC5 1412 aa23.79■■□□□ 1.4
HCG18-233ENST00000412685 NUP153P49790 1475 aaKnown RBP23.79■■□□□ 1.4
HCG18-233ENST00000412685 RAPGEF6Q8TEU7 1601 aa23.78■■□□□ 1.4
HCG18-233ENST00000412685 YTHDC1Q96MU7 727 aaKnown RBP23.77■■□□□ 1.4
HCG18-233ENST00000412685 FBLN2P98095 1184 aa23.74■■□□□ 1.39
HCG18-233ENST00000412685 NUP160Q12769 1436 aa23.72■■□□□ 1.39
HCG18-233ENST00000412685 AKNAQ7Z591 1439 aa23.71■■□□□ 1.39
HCG18-233ENST00000412685 RRP7BPQ9NSQ0 103 aa23.7■■□□□ 1.38
HCG18-233ENST00000412685 CHIC2Q9UKJ5 165 aa23.7■■□□□ 1.38
HCG18-233ENST00000412685 GCC2Q8IWJ2 1684 aa23.7■■□□□ 1.38
HCG18-233ENST00000412685 CDK11AQ9UQ88 783 aaPredicted RBP23.69■■□□□ 1.38
HCG18-233ENST00000412685 PPP1R15AO75807 674 aaPredicted RBP23.67■■□□□ 1.38
HCG18-233ENST00000412685 CARMIL2Q6F5E8 1435 aa23.67■■□□□ 1.38
HCG18-233ENST00000412685 JPH4Q96JJ6 628 aa23.66■■□□□ 1.38
HCG18-233ENST00000412685 GTF3C3Q9Y5Q9 886 aa23.65■■□□□ 1.38
HCG18-233ENST00000412685 PLB1Q6P1J6 1458 aa23.65■■□□□ 1.38
HCG18-233ENST00000412685 TONSLQ96HA7 1378 aa23.64■■□□□ 1.37
HCG18-233ENST00000412685 TROQ12816 1431 aaPredicted RBP23.61■■□□□ 1.37
HCG18-233ENST00000412685 PRG4Q92954 1404 aaPredicted RBP23.6■■□□□ 1.37
HCG18-233ENST00000412685 KDM6BO15054 1643 aa23.59■■□□□ 1.37
HCG18-233ENST00000412685 DAPK1P53355 1430 aa23.59■■□□□ 1.37
HCG18-233ENST00000412685 DNMT1P26358 1616 aaKnown RBP23.57■■□□□ 1.36
HCG18-233ENST00000412685 ROCK1Q13464 1354 aa23.56■■□□□ 1.36
HCG18-233ENST00000412685 ZNF644Q9H582 1327 aaPredicted RBP23.56■■□□□ 1.36
HCG18-233ENST00000412685 ABCC5O15440 1437 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms