RNA–Protein interactions for RNA: ENST00000412141.1

LINC00963-201, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 739 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-201ENST00000412141 CARMIL1Q5VZK9 1371 aa19.88■□□□□ 0.77
LINC00963-201ENST00000412141 RUSC2Q8N2Y8 1516 aa19.85■□□□□ 0.77
LINC00963-201ENST00000412141 CUL7Q14999 1698 aa19.84■□□□□ 0.77
LINC00963-201ENST00000412141 TTBK1Q5TCY1 1321 aaPredicted RBP19.83■□□□□ 0.77
LINC00963-201ENST00000412141 KIAA0586Q9BVV6 1533 aa19.81■□□□□ 0.76
LINC00963-201ENST00000412141 NPM1P06748 294 aaKnown RBP eCLIP19.72■□□□□ 0.75
LINC00963-201ENST00000412141 KIF13AQ9H1H9 1805 aa19.69■□□□□ 0.74
LINC00963-201ENST00000412141 RAPGEF2Q9Y4G8 1499 aa19.67■□□□□ 0.74
LINC00963-201ENST00000412141 PTPRGP23470 1445 aa19.66■□□□□ 0.74
LINC00963-201ENST00000412141 AEBP2Q6ZN18 517 aaPredicted RBP19.64■□□□□ 0.73
LINC00963-201ENST00000412141 CARMIL2Q6F5E8 1435 aa19.64■□□□□ 0.73
LINC00963-201ENST00000412141 IQGAP2Q13576 1575 aa19.64■□□□□ 0.73
LINC00963-201ENST00000412141 ADCY10Q96PN6 1610 aa19.63■□□□□ 0.73
LINC00963-201ENST00000412141 FAM69CQ0P6D2 419 aa19.62■□□□□ 0.73
LINC00963-201ENST00000412141 MAPKBP1O60336 1514 aa19.61■□□□□ 0.73
LINC00963-201ENST00000412141 ABCC10Q5T3U5 1492 aa19.61■□□□□ 0.73
LINC00963-201ENST00000412141 TNIKQ9UKE5 1360 aa19.6■□□□□ 0.73
LINC00963-201ENST00000412141 DIP2BQ9P265 1576 aa19.57■□□□□ 0.72
LINC00963-201ENST00000412141 DISP1Q96F81 1524 aa19.55■□□□□ 0.72
LINC00963-201ENST00000412141 FAM9AQ8IZU1 332 aaPredicted RBP19.54■□□□□ 0.72
LINC00963-201ENST00000412141 CSRNP3Q8WYN3 585 aa19.51■□□□□ 0.71
LINC00963-201ENST00000412141 PRXQ9BXM0 1461 aa19.5■□□□□ 0.71
LINC00963-201ENST00000412141 UGGT2Q9NYU1 1516 aa19.5■□□□□ 0.71
LINC00963-201ENST00000412141 UACAQ9BZF9 1416 aa19.48■□□□□ 0.71
LINC00963-201ENST00000412141 ABCC2Q92887 1545 aa19.46■□□□□ 0.71
LINC00963-201ENST00000412141 P3H3Q8IVL6 736 aa19.46■□□□□ 0.71
LINC00963-201ENST00000412141 KIAA0556O60303 1618 aa19.45■□□□□ 0.7
LINC00963-201ENST00000412141 RANGAP1P46060 587 aaPredicted RBP19.44■□□□□ 0.7
LINC00963-201ENST00000412141 CTTNBP2Q8WZ74 1663 aa19.43■□□□□ 0.7
LINC00963-201ENST00000412141 ASXL2Q76L83 1435 aa19.42■□□□□ 0.7
LINC00963-201ENST00000412141 UHRF1BP1LA0JNW5 1464 aa19.41■□□□□ 0.7
LINC00963-201ENST00000412141 KDM6BO15054 1643 aa19.4■□□□□ 0.7
LINC00963-201ENST00000412141 EHMT2Q96KQ7 1210 aa19.4■□□□□ 0.7
LINC00963-201ENST00000412141 GOLGA3Q08378 1498 aa19.39■□□□□ 0.69
LINC00963-201ENST00000412141 TSPOAP1O95153 1857 aa19.39■□□□□ 0.69
LINC00963-201ENST00000412141 PLB1Q6P1J6 1458 aa19.38■□□□□ 0.69
LINC00963-201ENST00000412141 ARID3CA6NKF2 412 aa19.37■□□□□ 0.69
LINC00963-201ENST00000412141 CHIC1Q5VXU3 224 aa19.36■□□□□ 0.69
LINC00963-201ENST00000412141 KDM5BQ9UGL1 1544 aa19.34■□□□□ 0.69
LINC00963-201ENST00000412141 EEA1Q15075 1411 aa19.34■□□□□ 0.69
LINC00963-201ENST00000412141 GLI2P10070 1586 aa19.32■□□□□ 0.68
LINC00963-201ENST00000412141 KCNH8Q96L42 1107 aa19.31■□□□□ 0.68
LINC00963-201ENST00000412141 ZCCHC11Q5TAX3 1644 aaKnown RBP19.31■□□□□ 0.68
LINC00963-201ENST00000412141 PPRC1Q5VV67 1664 aaKnown RBP19.3■□□□□ 0.68
LINC00963-201ENST00000412141 EPRSP07814 1512 aaKnown RBP19.27■□□□□ 0.68
LINC00963-201ENST00000412141 ABCA8O94911 1581 aa19.26■□□□□ 0.67
LINC00963-201ENST00000412141 KDM4FA0A1W2PPD8 638 aa19.25■□□□□ 0.67
LINC00963-201ENST00000412141 WDR7Q9Y4E6 1490 aa19.22■□□□□ 0.67
LINC00963-201ENST00000412141 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.22■□□□□ 0.67
LINC00963-201ENST00000412141 UBTFP17480 764 aaKnown RBP19.22■□□□□ 0.67
LINC00963-201ENST00000412141 HNRNPUL2Q1KMD3 747 aaKnown RBP19.22■□□□□ 0.67
LINC00963-201ENST00000412141 MAP3K4Q9Y6R4 1608 aa19.22■□□□□ 0.67
LINC00963-201ENST00000412141 FHOD3Q2V2M9 1422 aa19.19■□□□□ 0.66
LINC00963-201ENST00000412141 COL17A1Q9UMD9 1497 aaPredicted RBP19.19■□□□□ 0.66
LINC00963-201ENST00000412141 SAMD9Q5K651 1589 aa19.18■□□□□ 0.66
LINC00963-201ENST00000412141 ATP10BO94823 1461 aa19.16■□□□□ 0.66
LINC00963-201ENST00000412141 KIF21BO75037 1637 aa19.15■□□□□ 0.66
LINC00963-201ENST00000412141 TEX14Q8IWB6 1497 aa19.15■□□□□ 0.66
LINC00963-201ENST00000412141 CD109Q6YHK3 1445 aa19.14■□□□□ 0.65
LINC00963-201ENST00000412141 RAPGEF6Q8TEU7 1601 aa19.1■□□□□ 0.65
LINC00963-201ENST00000412141 ATP1B4Q9UN42 357 aaPredicted RBP19.09■□□□□ 0.65
LINC00963-201ENST00000412141 ADGRL1O94910 1474 aa19.09■□□□□ 0.65
LINC00963-201ENST00000412141 NUP153P49790 1475 aaKnown RBP19.06■□□□□ 0.64
LINC00963-201ENST00000412141 MAGI3Q5TCQ9 1506 aa19.05■□□□□ 0.64
LINC00963-201ENST00000412141 CFAP43Q8NDM7 1665 aa19.05■□□□□ 0.64
LINC00963-201ENST00000412141 EFCAB5A4FU69 1503 aa19.02■□□□□ 0.64
LINC00963-201ENST00000412141 PLEKHD1A6NEE1 506 aa19.02■□□□□ 0.64
LINC00963-201ENST00000412141 ARHGAP35Q9NRY4 1499 aa18.97■□□□□ 0.63
LINC00963-201ENST00000412141 CDK13Q14004 1512 aaKnown RBP18.95■□□□□ 0.62
LINC00963-201ENST00000412141 RAPGEF3O95398 923 aa18.94■□□□□ 0.62
LINC00963-201ENST00000412141 ABCA9Q8IUA7 1624 aa18.93■□□□□ 0.62
LINC00963-201ENST00000412141 FMN1Q68DA7 1419 aa18.91■□□□□ 0.62
LINC00963-201ENST00000412141 ARAP3Q8WWN8 1544 aa18.9■□□□□ 0.62
LINC00963-201ENST00000412141 HECW2Q9P2P5 1572 aa18.85■□□□□ 0.61
LINC00963-201ENST00000412141 NEO1Q92859 1461 aa18.84■□□□□ 0.61
LINC00963-201ENST00000412141 PHLDB1Q86UU1 1377 aa18.84■□□□□ 0.61
LINC00963-201ENST00000412141 CDK11AQ9UQ88 783 aaPredicted RBP18.84■□□□□ 0.61
LINC00963-201ENST00000412141 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.84■□□□□ 0.61
LINC00963-201ENST00000412141 HECW1Q76N89 1606 aa18.83■□□□□ 0.61
LINC00963-201ENST00000412141 TTC37Q6PGP7 1564 aa18.81■□□□□ 0.6
LINC00963-201ENST00000412141 FANCAO15360 1455 aa18.8■□□□□ 0.6
LINC00963-201ENST00000412141 AKNAQ7Z591 1439 aa18.8■□□□□ 0.6
LINC00963-201ENST00000412141 ARID4BQ4LE39 1312 aaPredicted RBP18.78■□□□□ 0.6
LINC00963-201ENST00000412141 CLIP1P30622 1438 aa18.78■□□□□ 0.6
LINC00963-201ENST00000412141 FRMPD1Q5SYB0 1578 aa18.77■□□□□ 0.6
LINC00963-201ENST00000412141 DENND4BO75064 1496 aaPredicted RBP18.77■□□□□ 0.59
LINC00963-201ENST00000412141 ILDR1Q86SU0 546 aaPredicted RBP18.74■□□□□ 0.59
LINC00963-201ENST00000412141 PLCH2O75038 1416 aa18.74■□□□□ 0.59
LINC00963-201ENST00000412141 TROQ12816 1431 aaPredicted RBP18.74■□□□□ 0.59
LINC00963-201ENST00000412141 CASKIN1Q8WXD9 1431 aa18.74■□□□□ 0.59
LINC00963-201ENST00000412141 PCF11O94913 1555 aaKnown RBP18.73■□□□□ 0.59
LINC00963-201ENST00000412141 EFCAB2Q5VUJ9 269 aa18.73■□□□□ 0.59
LINC00963-201ENST00000412141 KIF14Q15058 1648 aa18.72■□□□□ 0.59
LINC00963-201ENST00000412141 LRRIQ1Q96JM4 1722 aa18.71■□□□□ 0.59
LINC00963-201ENST00000412141 SCAPERQ9BY12 1400 aa18.71■□□□□ 0.59
LINC00963-201ENST00000412141 ADAMTSL3P82987 1691 aa18.7■□□□□ 0.58
LINC00963-201ENST00000412141 CFAP74Q9C0B2 1584 aa18.69■□□□□ 0.58
LINC00963-201ENST00000412141 PTPRMP28827 1452 aa18.68■□□□□ 0.58
LINC00963-201ENST00000412141 LOC105371045A0A1W2PR82 267 aa18.67■□□□□ 0.58
LINC00963-201ENST00000412141 MYT1LQ9UL68 1186 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms