RNA–Protein interactions for RNA: ENST00000411809.6

CLINT1-201, Transcript of clathrin interactor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLINT1, Length 3,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-201ENST00000411809 TIAM1Q13009 1591 aa19.62■□□□□ 0.73
CLINT1-201ENST00000411809 TARBP1Q13395 1621 aaKnown RBP19.58■□□□□ 0.72
CLINT1-201ENST00000411809 KANK4Q5T7N3 995 aaPredicted RBP19.56■□□□□ 0.72
CLINT1-201ENST00000411809 EFCAB5A4FU69 1503 aa19.56■□□□□ 0.72
CLINT1-201ENST00000411809 PCF11O94913 1555 aaKnown RBP19.54■□□□□ 0.72
CLINT1-201ENST00000411809 SAMD9Q5K651 1589 aa19.52■□□□□ 0.72
CLINT1-201ENST00000411809 AQRO60306 1485 aaKnown RBP eCLIP19.49■□□□□ 0.712e-6■■■■□ 25
CLINT1-201ENST00000411809 LRRIQ1Q96JM4 1722 aa19.48■□□□□ 0.71
CLINT1-201ENST00000411809 PDS5BQ9NTI5 1447 aa19.46■□□□□ 0.71
CLINT1-201ENST00000411809 LRRC9Q6ZRR7 1453 aa19.46■□□□□ 0.71
CLINT1-201ENST00000411809 PBRM1Q86U86 1689 aa19.45■□□□□ 0.7
CLINT1-201ENST00000411809 RANGAP1P46060 587 aaPredicted RBP19.45■□□□□ 0.7
CLINT1-201ENST00000411809 DNAJC5BQ9UF47 199 aa19.44■□□□□ 0.7
CLINT1-201ENST00000411809 FYCO1Q9BQS8 1478 aa19.44■□□□□ 0.7
CLINT1-201ENST00000411809 APLP2Q06481 763 aa19.44■□□□□ 0.7
CLINT1-201ENST00000411809 SNAPC4Q5SXM2 1469 aa19.42■□□□□ 0.7
CLINT1-201ENST00000411809 FHAD1B1AJZ9 1412 aa19.42■□□□□ 0.7
CLINT1-201ENST00000411809 DHX57Q6P158 1386 aaKnown RBP19.39■□□□□ 0.7
CLINT1-201ENST00000411809 HNRNPUL2Q1KMD3 747 aaKnown RBP19.39■□□□□ 0.69
CLINT1-201ENST00000411809 CASKIN1Q8WXD9 1431 aa19.39■□□□□ 0.69
CLINT1-201ENST00000411809 GAPVD1Q14C86 1478 aa19.38■□□□□ 0.69
CLINT1-201ENST00000411809 CCNB3Q8WWL7 1395 aa19.38■□□□□ 0.69
CLINT1-201ENST00000411809 ZNF316A6NFI3 1004 aaPredicted RBP19.38■□□□□ 0.69
CLINT1-201ENST00000411809 CLSPNQ9HAW4 1339 aa19.37■□□□□ 0.69
CLINT1-201ENST00000411809 THOC2Q8NI27 1593 aaKnown RBP19.34■□□□□ 0.69
CLINT1-201ENST00000411809 FHOD3Q2V2M9 1422 aa19.32■□□□□ 0.68
CLINT1-201ENST00000411809 ADAMTS12P58397 1594 aa19.32■□□□□ 0.68
CLINT1-201ENST00000411809 MIER1Q8N108 512 aa19.31■□□□□ 0.68
CLINT1-201ENST00000411809 PHLDB1Q86UU1 1377 aa19.31■□□□□ 0.68
CLINT1-201ENST00000411809 WDR62O43379 1518 aa19.29■□□□□ 0.68
CLINT1-201ENST00000411809 GRIN2BQ13224 1484 aa19.29■□□□□ 0.68
CLINT1-201ENST00000411809 MRC2Q9UBG0 1479 aa19.28■□□□□ 0.68
CLINT1-201ENST00000411809 TDRD9Q8NDG6 1382 aaKnown RBP19.27■□□□□ 0.68
CLINT1-201ENST00000411809 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.27■□□□□ 0.68
CLINT1-201ENST00000411809 MAPKBP1O60336 1514 aa19.27■□□□□ 0.67
CLINT1-201ENST00000411809 FMN1Q68DA7 1419 aa19.25■□□□□ 0.67
CLINT1-201ENST00000411809 ARHGEF11O15085 1522 aa19.23■□□□□ 0.67
CLINT1-201ENST00000411809 IQGAP2Q13576 1575 aa19.17■□□□□ 0.66
CLINT1-201ENST00000411809 MYT1Q01538 1121 aa19.17■□□□□ 0.66
CLINT1-201ENST00000411809 MAGI3Q5TCQ9 1506 aa19.15■□□□□ 0.66
CLINT1-201ENST00000411809 RAB3GAP2Q9H2M9 1393 aa19.14■□□□□ 0.66
CLINT1-201ENST00000411809 UGGT2Q9NYU1 1516 aa19.14■□□□□ 0.66
CLINT1-201ENST00000411809 IFT140Q96RY7 1462 aa19.14■□□□□ 0.65
CLINT1-201ENST00000411809 SUPT6HQ7KZ85 1726 aaKnown RBP19.13■□□□□ 0.65
CLINT1-201ENST00000411809 EHBP1L1Q8N3D4 1523 aa19.12■□□□□ 0.65
CLINT1-201ENST00000411809 SETD5Q9C0A6 1442 aa19.11■□□□□ 0.65
CLINT1-201ENST00000411809 EIF4G3O43432 1585 aaKnown RBP19.1■□□□□ 0.65
CLINT1-201ENST00000411809 FGD6Q6ZV73 1430 aa19.1■□□□□ 0.65
CLINT1-201ENST00000411809 HECW1Q76N89 1606 aa19.09■□□□□ 0.65
CLINT1-201ENST00000411809 ZNF608Q9ULD9 1512 aaPredicted RBP19.09■□□□□ 0.65
CLINT1-201ENST00000411809 P3H3Q8IVL6 736 aa19.08■□□□□ 0.64
CLINT1-201ENST00000411809 CCDC18Q5T9S5 1454 aa19.07■□□□□ 0.64
CLINT1-201ENST00000411809 NCOA2Q15596 1464 aa19.05■□□□□ 0.64
CLINT1-201ENST00000411809 TCOF1Q13428 1488 aaKnown RBP19.04■□□□□ 0.64
CLINT1-201ENST00000411809 KIAA0556O60303 1618 aa19.03■□□□□ 0.64
CLINT1-201ENST00000411809 PTPRKQ15262 1439 aa19.03■□□□□ 0.64
CLINT1-201ENST00000411809 PTPN23Q9H3S7 1636 aa19.02■□□□□ 0.64
CLINT1-201ENST00000411809 DISP1Q96F81 1524 aa19.02■□□□□ 0.64
CLINT1-201ENST00000411809 MYOM3Q5VTT5 1437 aa19.01■□□□□ 0.63
CLINT1-201ENST00000411809 GCC2Q8IWJ2 1684 aa19.01■□□□□ 0.63
CLINT1-201ENST00000411809 EPRSP07814 1512 aaKnown RBP18.99■□□□□ 0.63
CLINT1-201ENST00000411809 HFM1A2PYH4 1435 aa18.98■□□□□ 0.63
CLINT1-201ENST00000411809 KIAA0586Q9BVV6 1533 aa18.98■□□□□ 0.63
CLINT1-201ENST00000411809 GRIN2AQ12879 1464 aa18.96■□□□□ 0.63
CLINT1-201ENST00000411809 CEP170Q5SW79 1584 aa18.94■□□□□ 0.62
CLINT1-201ENST00000411809 MAGI1Q96QZ7 1491 aaPredicted RBP18.93■□□□□ 0.62
CLINT1-201ENST00000411809 MTUS2Q5JR59 1369 aa18.91■□□□□ 0.62
CLINT1-201ENST00000411809 CDK13Q14004 1512 aaKnown RBP18.91■□□□□ 0.62
CLINT1-201ENST00000411809 RAPGEF6Q8TEU7 1601 aa18.91■□□□□ 0.62
CLINT1-201ENST00000411809 NAIPQ13075 1403 aa18.9■□□□□ 0.62
CLINT1-201ENST00000411809 AKNAQ7Z591 1439 aa18.9■□□□□ 0.62
CLINT1-201ENST00000411809 KDM5BQ9UGL1 1544 aa18.88■□□□□ 0.61
CLINT1-201ENST00000411809 ADCY10Q96PN6 1610 aa18.87■□□□□ 0.61
CLINT1-201ENST00000411809 NUP153P49790 1475 aaKnown RBP18.87■□□□□ 0.61
CLINT1-201ENST00000411809 DENND4BO75064 1496 aaPredicted RBP18.86■□□□□ 0.61
CLINT1-201ENST00000411809 ITGAEP38570 1179 aa18.86■□□□□ 0.61
CLINT1-201ENST00000411809 MIA2Q96PC5 1412 aa18.86■□□□□ 0.61
CLINT1-201ENST00000411809 UACAQ9BZF9 1416 aa18.85■□□□□ 0.61
CLINT1-201ENST00000411809 SYNJ2O15056 1496 aa18.85■□□□□ 0.61
CLINT1-201ENST00000411809 FAM50AQ14320 339 aaKnown RBP18.85■□□□□ 0.61
CLINT1-201ENST00000411809 KDM6BO15054 1643 aa18.84■□□□□ 0.61
CLINT1-201ENST00000411809 NUP160Q12769 1436 aa18.84■□□□□ 0.61
CLINT1-201ENST00000411809 SUPT16HQ9Y5B9 1047 aaKnown RBP18.82■□□□□ 0.6
CLINT1-201ENST00000411809 TIMELESSQ9UNS1 1208 aa18.82■□□□□ 0.6
CLINT1-201ENST00000411809 DNMT1P26358 1616 aaKnown RBP18.81■□□□□ 0.6
CLINT1-201ENST00000411809 ATP1B4Q9UN42 357 aaPredicted RBP18.78■□□□□ 0.6
CLINT1-201ENST00000411809 CROCC2H7BZ55 1655 aa18.76■□□□□ 0.59
CLINT1-201ENST00000411809 ERCC6Q03468 1493 aa18.75■□□□□ 0.59
CLINT1-201ENST00000411809 BCANQ96GW7 911 aa18.75■□□□□ 0.59
CLINT1-201ENST00000411809 ABCA8O94911 1581 aa18.73■□□□□ 0.59
CLINT1-201ENST00000411809 ITSN2Q9NZM3 1697 aa18.73■□□□□ 0.59
CLINT1-201ENST00000411809 SIN3AQ96ST3 1273 aa18.72■□□□□ 0.59
CLINT1-201ENST00000411809 KCNH8Q96L42 1107 aa18.71■□□□□ 0.59
CLINT1-201ENST00000411809 ADGBQ8N7X0 1667 aa18.7■□□□□ 0.58
CLINT1-201ENST00000411809 ROCK1Q13464 1354 aa18.69■□□□□ 0.58
CLINT1-201ENST00000411809 KIF14Q15058 1648 aa18.69■□□□□ 0.58
CLINT1-201ENST00000411809 DAPK1P53355 1430 aa18.68■□□□□ 0.58
CLINT1-201ENST00000411809 PPP1R15AO75807 674 aaPredicted RBP18.66■□□□□ 0.58
CLINT1-201ENST00000411809 CDC42BPAQ5VT25 1732 aa18.66■□□□□ 0.58
CLINT1-201ENST00000411809 TSHZ2Q9NRE2 1034 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms