RNA–Protein interactions for RNA: ENST00000410528.1

RN7SKP271-201, Transcript of RNA, 7SK small nuclear pseudogene 271, humanhuman

BASIC

Gene RN7SKP271, Length 320 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP271-201ENST00000410528 PBRM1Q86U86 1689 aa10.69□□□□□ -0.7
RN7SKP271-201ENST00000410528 AQRO60306 1485 aaKnown RBP eCLIP10.68□□□□□ -0.7
RN7SKP271-201ENST00000410528 ADAMTS12P58397 1594 aa10.67□□□□□ -0.7
RN7SKP271-201ENST00000410528 ZNF608Q9ULD9 1512 aaPredicted RBP10.67□□□□□ -0.7
RN7SKP271-201ENST00000410528 APLP2Q06481 763 aa10.66□□□□□ -0.7
RN7SKP271-201ENST00000410528 SAMD9Q5K651 1589 aa10.65□□□□□ -0.7
RN7SKP271-201ENST00000410528 ZEB1P37275 1124 aaPredicted RBP10.64□□□□□ -0.71
RN7SKP271-201ENST00000410528 RIMBP3CA6NJZ7 1639 aa10.62□□□□□ -0.71
RN7SKP271-201ENST00000410528 RIMBP3BA6NNM3 1639 aa10.62□□□□□ -0.71
RN7SKP271-201ENST00000410528 RIMBP3Q9UFD9 1639 aa10.62□□□□□ -0.71
RN7SKP271-201ENST00000410528 MAGI1Q96QZ7 1491 aaPredicted RBP10.62□□□□□ -0.71
RN7SKP271-201ENST00000410528 FYCO1Q9BQS8 1478 aa10.62□□□□□ -0.71
RN7SKP271-201ENST00000410528 FMN1Q68DA7 1419 aa10.62□□□□□ -0.71
RN7SKP271-201ENST00000410528 ARHGEF11O15085 1522 aa10.62□□□□□ -0.71
RN7SKP271-201ENST00000410528 EIF4G3O43432 1585 aaKnown RBP10.61□□□□□ -0.71
RN7SKP271-201ENST00000410528 CASKIN1Q8WXD9 1431 aa10.61□□□□□ -0.71
RN7SKP271-201ENST00000410528 TIAM1Q13009 1591 aa10.6□□□□□ -0.71
RN7SKP271-201ENST00000410528 PPARGC1BQ86YN6 1023 aaKnown RBP10.59□□□□□ -0.71
RN7SKP271-201ENST00000410528 IQGAP2Q13576 1575 aa10.59□□□□□ -0.71
RN7SKP271-201ENST00000410528 UGGT2Q9NYU1 1516 aa10.58□□□□□ -0.72
RN7SKP271-201ENST00000410528 CFAP43Q8NDM7 1665 aa10.58□□□□□ -0.72
RN7SKP271-201ENST00000410528 KIAA0586Q9BVV6 1533 aa10.58□□□□□ -0.72
RN7SKP271-201ENST00000410528 RRBP1Q9P2E9 1410 aaKnown RBP10.57□□□□□ -0.72
RN7SKP271-201ENST00000410528 SYNJ2O15056 1496 aa10.56□□□□□ -0.72
RN7SKP271-201ENST00000410528 GRIN2AQ12879 1464 aa10.56□□□□□ -0.72
RN7SKP271-201ENST00000410528 SNAPC4Q5SXM2 1469 aa10.56□□□□□ -0.72
RN7SKP271-201ENST00000410528 RANGAP1P46060 587 aaPredicted RBP10.56□□□□□ -0.72
RN7SKP271-201ENST00000410528 PCF11O94913 1555 aaKnown RBP10.56□□□□□ -0.72
RN7SKP271-201ENST00000410528 LRRC9Q6ZRR7 1453 aa10.55□□□□□ -0.72
RN7SKP271-201ENST00000410528 FHOD3Q2V2M9 1422 aa10.54□□□□□ -0.72
RN7SKP271-201ENST00000410528 KANK4Q5T7N3 995 aaPredicted RBP10.53□□□□□ -0.72
RN7SKP271-201ENST00000410528 NUP160Q12769 1436 aa10.51□□□□□ -0.73
RN7SKP271-201ENST00000410528 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.51□□□□□ -0.73
RN7SKP271-201ENST00000410528 CHD1O14646 1710 aa10.5□□□□□ -0.73
RN7SKP271-201ENST00000410528 CCDC18Q5T9S5 1454 aa10.49□□□□□ -0.73
RN7SKP271-201ENST00000410528 CLASP1Q7Z460 1538 aa10.48□□□□□ -0.73
RN7SKP271-201ENST00000410528 CCNB3Q8WWL7 1395 aa10.48□□□□□ -0.73
RN7SKP271-201ENST00000410528 DISP1Q96F81 1524 aa10.48□□□□□ -0.73
RN7SKP271-201ENST00000410528 CYB5RLQ6IPT4 315 aa10.47□□□□□ -0.73
RN7SKP271-201ENST00000410528 KIAA0556O60303 1618 aa10.47□□□□□ -0.73
RN7SKP271-201ENST00000410528 HECW1Q76N89 1606 aa10.47□□□□□ -0.73
RN7SKP271-201ENST00000410528 CEP170Q5SW79 1584 aa10.46□□□□□ -0.74
RN7SKP271-201ENST00000410528 CHMP7Q8WUX9 453 aaPredicted RBP10.45□□□□□ -0.74
RN7SKP271-201ENST00000410528 P3H3Q8IVL6 736 aa10.44□□□□□ -0.74
RN7SKP271-201ENST00000410528 EHBP1L1Q8N3D4 1523 aa10.43□□□□□ -0.74
RN7SKP271-201ENST00000410528 TTBK1Q5TCY1 1321 aaPredicted RBP10.43□□□□□ -0.74
RN7SKP271-201ENST00000410528 CLSPNQ9HAW4 1339 aa10.43□□□□□ -0.74
RN7SKP271-201ENST00000410528 PHLDB1Q86UU1 1377 aa10.42□□□□□ -0.74
RN7SKP271-201ENST00000410528 LRRIQ1Q96JM4 1722 aa10.42□□□□□ -0.74
RN7SKP271-201ENST00000410528 CARMIL2Q6F5E8 1435 aa10.41□□□□□ -0.74
RN7SKP271-201ENST00000410528 CCER1Q8TC90 406 aaPredicted RBP10.41□□□□□ -0.74
RN7SKP271-201ENST00000410528 EPRSP07814 1512 aaKnown RBP10.41□□□□□ -0.74
RN7SKP271-201ENST00000410528 MTUS2Q5JR59 1369 aa10.4□□□□□ -0.74
RN7SKP271-201ENST00000410528 SUPT6HQ7KZ85 1726 aaKnown RBP10.39□□□□□ -0.75
RN7SKP271-201ENST00000410528 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.39□□□□□ -0.75
RN7SKP271-201ENST00000410528 FBLN2P98095 1184 aa10.39□□□□□ -0.75
RN7SKP271-201ENST00000410528 FGD6Q6ZV73 1430 aa10.38□□□□□ -0.75
RN7SKP271-201ENST00000410528 NCOA2Q15596 1464 aa10.37□□□□□ -0.75
RN7SKP271-201ENST00000410528 RAPGEF6Q8TEU7 1601 aa10.37□□□□□ -0.75
RN7SKP271-201ENST00000410528 HNRNPUL2Q1KMD3 747 aaKnown RBP10.37□□□□□ -0.75
RN7SKP271-201ENST00000410528 MYOM3Q5VTT5 1437 aa10.37□□□□□ -0.75
RN7SKP271-201ENST00000410528 JPH4Q96JJ6 628 aa10.37□□□□□ -0.75
RN7SKP271-201ENST00000410528 NUP153P49790 1475 aaKnown RBP10.36□□□□□ -0.75
RN7SKP271-201ENST00000410528 SHROOM2Q13796 1616 aa10.36□□□□□ -0.75
RN7SKP271-201ENST00000410528 MIA2Q96PC5 1412 aa10.35□□□□□ -0.75
RN7SKP271-201ENST00000410528 MAGI3Q5TCQ9 1506 aa10.35□□□□□ -0.75
RN7SKP271-201ENST00000410528 TCOF1Q13428 1488 aaKnown RBP10.35□□□□□ -0.75
RN7SKP271-201ENST00000410528 ATP1B4Q9UN42 357 aaPredicted RBP10.33□□□□□ -0.76
RN7SKP271-201ENST00000410528 CDK11AQ9UQ88 783 aaPredicted RBP10.33□□□□□ -0.76
RN7SKP271-201ENST00000410528 ABCA8O94911 1581 aa10.33□□□□□ -0.76
RN7SKP271-201ENST00000410528 DHX57Q6P158 1386 aaKnown RBP10.31□□□□□ -0.76
RN7SKP271-201ENST00000410528 TRHP20396 242 aaPredicted RBP10.31□□□□□ -0.76
RN7SKP271-201ENST00000410528 CDK13Q14004 1512 aaKnown RBP10.31□□□□□ -0.76
RN7SKP271-201ENST00000410528 SETD5Q9C0A6 1442 aa10.31□□□□□ -0.76
RN7SKP271-201ENST00000410528 ADCY10Q96PN6 1610 aa10.3□□□□□ -0.76
RN7SKP271-201ENST00000410528 AKNAQ7Z591 1439 aa10.3□□□□□ -0.76
RN7SKP271-201ENST00000410528 ACIN1Q9UKV3 1341 aaKnown RBP10.3□□□□□ -0.76
RN7SKP271-201ENST00000410528 TROQ12816 1431 aaPredicted RBP10.29□□□□□ -0.76
RN7SKP271-201ENST00000410528 PTPN23Q9H3S7 1636 aa10.29□□□□□ -0.76
RN7SKP271-201ENST00000410528 HFM1A2PYH4 1435 aa10.28□□□□□ -0.76
RN7SKP271-201ENST00000410528 PRG4Q92954 1404 aaPredicted RBP10.28□□□□□ -0.76
RN7SKP271-201ENST00000410528 PLB1Q6P1J6 1458 aa10.28□□□□□ -0.76
RN7SKP271-201ENST00000410528 RAB3GAP2Q9H2M9 1393 aa10.26□□□□□ -0.77
RN7SKP271-201ENST00000410528 PTPRGP23470 1445 aa10.25□□□□□ -0.77
RN7SKP271-201ENST00000410528 FAM50AQ14320 339 aaKnown RBP10.25□□□□□ -0.77
RN7SKP271-201ENST00000410528 ATP10BO94823 1461 aa10.24□□□□□ -0.77
RN7SKP271-201ENST00000410528 ITSN2Q9NZM3 1697 aa10.24□□□□□ -0.77
RN7SKP271-201ENST00000410528 ROCK1Q13464 1354 aa10.23□□□□□ -0.77
RN7SKP271-201ENST00000410528 PTPRKQ15262 1439 aa10.23□□□□□ -0.77
RN7SKP271-201ENST00000410528 UHRF1BP1LA0JNW5 1464 aa10.23□□□□□ -0.77
RN7SKP271-201ENST00000410528 ERCC6L2Q5T890 1561 aa10.22□□□□□ -0.77
RN7SKP271-201ENST00000410528 NAIPQ13075 1403 aa10.22□□□□□ -0.77
RN7SKP271-201ENST00000410528 UACAQ9BZF9 1416 aa10.22□□□□□ -0.77
RN7SKP271-201ENST00000410528 TIMELESSQ9UNS1 1208 aa10.21□□□□□ -0.77
RN7SKP271-201ENST00000410528 DNMT1P26358 1616 aaKnown RBP10.21□□□□□ -0.78
RN7SKP271-201ENST00000410528 MAPKBP1O60336 1514 aa10.2□□□□□ -0.78
RN7SKP271-201ENST00000410528 KIF14Q15058 1648 aa10.2□□□□□ -0.78
RN7SKP271-201ENST00000410528 ABCC10Q5T3U5 1492 aa10.2□□□□□ -0.78
RN7SKP271-201ENST00000410528 GCC2Q8IWJ2 1684 aa10.2□□□□□ -0.78
RN7SKP271-201ENST00000410528 ABCC2Q92887 1545 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms