RNA–Protein interactions for RNA: ENST00000409894.7

POLR1B-203, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best) BASIC

Gene POLR1B, Length 4,457 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-203ENST00000409894 DNTTIP2Q5QJE6 756 aaKnown RBP12.06□□□□□ -0.48
POLR1B-203ENST00000409894 B4GALNT3Q6L9W6 998 aa12.06□□□□□ -0.48
POLR1B-203ENST00000409894 NCLP19338 710 aaKnown RBP12.06□□□□□ -0.48
POLR1B-203ENST00000409894 GOLGA6L22H0YM25 854 aa12.05□□□□□ -0.48
POLR1B-203ENST00000409894 PTMAP06454 111 aaKnown RBP12.05□□□□□ -0.48
POLR1B-203ENST00000409894 CHIC2Q9UKJ5 165 aa12.05□□□□□ -0.48
POLR1B-203ENST00000409894 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.05□□□□□ -0.48
POLR1B-203ENST00000409894 EIF4G2P78344 907 aaKnown RBP eCLIP12.03□□□□□ -0.48
POLR1B-203ENST00000409894 ARID4BQ4LE39 1312 aaPredicted RBP12.01□□□□□ -0.49
POLR1B-203ENST00000409894 MYO15BQ96JP2 1530 aa12.01□□□□□ -0.49
POLR1B-203ENST00000409894 SCRIBQ14160 1630 aa12.01□□□□□ -0.49
POLR1B-203ENST00000409894 KDM2AQ9Y2K7 1162 aa12□□□□□ -0.49
POLR1B-203ENST00000409894 RGS3P49796 1198 aa12□□□□□ -0.49
POLR1B-203ENST00000409894 CDK11BP21127 795 aaKnown RBP11.99□□□□□ -0.49
POLR1B-203ENST00000409894 TSHZ2Q9NRE2 1034 aa11.98□□□□□ -0.49
POLR1B-203ENST00000409894 CHGAP10645 457 aaKnown RBP11.97□□□□□ -0.49
POLR1B-203ENST00000409894 TPRNQ4KMQ1 711 aa11.96□□□□□ -0.5
POLR1B-203ENST00000409894 AMER1Q5JTC6 1135 aaPredicted RBP11.96□□□□□ -0.5
POLR1B-203ENST00000409894 MYH16Q9H6N6 1097 aa11.95□□□□□ -0.5
POLR1B-203ENST00000409894 PLCB2Q00722 1185 aa11.93□□□□□ -0.5
POLR1B-203ENST00000409894 RB1CC1Q8TDY2 1594 aa11.9□□□□□ -0.5
POLR1B-203ENST00000409894 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.89□□□□□ -0.512e-6■■□□□ 13
POLR1B-203ENST00000409894 PNNQ9H307 717 aaKnown RBP11.88□□□□□ -0.51
POLR1B-203ENST00000409894 L1TD1Q5T7N2 865 aaKnown RBP11.87□□□□□ -0.51
POLR1B-203ENST00000409894 ARID3AQ99856 593 aa11.87□□□□□ -0.51
POLR1B-203ENST00000409894 RRP7BPQ9NSQ0 103 aa11.86□□□□□ -0.51
POLR1B-203ENST00000409894 SIN3AQ96ST3 1273 aa11.86□□□□□ -0.51
POLR1B-203ENST00000409894 CCDC180Q9P1Z9 1646 aa11.85□□□□□ -0.51
POLR1B-203ENST00000409894 MSNP26038 577 aaKnown RBP11.85□□□□□ -0.51
POLR1B-203ENST00000409894 CLIP1P30622 1438 aa11.84□□□□□ -0.51
POLR1B-203ENST00000409894 ZRSR1Q15695 479 aaKnown RBP11.83□□□□□ -0.52
POLR1B-203ENST00000409894 NEUROD2Q15784 382 aa11.83□□□□□ -0.52
POLR1B-203ENST00000409894 SPRYD3Q8NCJ5 442 aa11.83□□□□□ -0.52
POLR1B-203ENST00000409894 HSP90AB1P08238 724 aaKnown RBP11.83□□□□□ -0.52
POLR1B-203ENST00000409894 FTSJ3Q8IY81 847 aaKnown RBP11.82□□□□□ -0.52
POLR1B-203ENST00000409894 FRAT1Q92837 279 aaPredicted RBP11.82□□□□□ -0.52
POLR1B-203ENST00000409894 MTUS2Q5JR59 1369 aa11.81□□□□□ -0.52
POLR1B-203ENST00000409894 GZF1Q9H116 711 aaPredicted RBP11.81□□□□□ -0.52
POLR1B-203ENST00000409894 ZBTB7CA1YPR0 619 aa11.79□□□□□ -0.52
POLR1B-203ENST00000409894 TSPY4P0CV99 314 aa11.79□□□□□ -0.52
POLR1B-203ENST00000409894 TSPY10P0CW01 314 aa11.79□□□□□ -0.52
POLR1B-203ENST00000409894 STAG3Q9UJ98 1225 aa11.79□□□□□ -0.52
POLR1B-203ENST00000409894 PLPPR3Q6T4P5 718 aa11.79□□□□□ -0.52
POLR1B-203ENST00000409894 SLKQ9H2G2 1235 aaPredicted RBP11.79□□□□□ -0.52
POLR1B-203ENST00000409894 CEP162Q5TB80 1403 aa11.79□□□□□ -0.52
POLR1B-203ENST00000409894 CHAF1AQ13111 956 aaPredicted RBP11.78□□□□□ -0.52
POLR1B-203ENST00000409894 RGL3Q3MIN7 710 aa11.78□□□□□ -0.52
POLR1B-203ENST00000409894 ERCC6Q03468 1493 aa11.77□□□□□ -0.52
POLR1B-203ENST00000409894 HSCBQ8IWL3 235 aa11.77□□□□□ -0.53
POLR1B-203ENST00000409894 NPM1P06748 294 aaKnown RBP eCLIP11.76□□□□□ -0.53
POLR1B-203ENST00000409894 CCER2I3L3R5 266 aa11.76□□□□□ -0.53
POLR1B-203ENST00000409894 VSIG10Q8N0Z9 540 aa11.76□□□□□ -0.53
POLR1B-203ENST00000409894 IPO9Q96P70 1041 aaKnown RBP11.76□□□□□ -0.53
POLR1B-203ENST00000409894 KNSTRNQ9Y448 316 aa11.76□□□□□ -0.53
POLR1B-203ENST00000409894 CASC1Q6TDU7 716 aa11.76□□□□□ -0.53
POLR1B-203ENST00000409894 CARD11Q9BXL7 1154 aa11.74□□□□□ -0.53
POLR1B-203ENST00000409894 TRHP20396 242 aaPredicted RBP11.73□□□□□ -0.53
POLR1B-203ENST00000409894 HSP90AA2PQ14568 343 aaPredicted RBP11.73□□□□□ -0.53
POLR1B-203ENST00000409894 SENP3Q9H4L4 574 aaPredicted RBP11.72□□□□□ -0.53
POLR1B-203ENST00000409894 CFAP53Q96M91 514 aa11.71□□□□□ -0.53
POLR1B-203ENST00000409894 TCERG1O14776 1098 aaKnown RBP11.7□□□□□ -0.54
POLR1B-203ENST00000409894 NRDCO43847 1150 aa11.7□□□□□ -0.54
POLR1B-203ENST00000409894 CC2D1BQ5T0F9 858 aaKnown RBP11.69□□□□□ -0.54
POLR1B-203ENST00000409894 GOLGA6L3A6NEY3 463 aa11.69□□□□□ -0.54
POLR1B-203ENST00000409894 TAOK2Q9UL54 1235 aa11.68□□□□□ -0.54
POLR1B-203ENST00000409894 ESF1Q9H501 851 aaKnown RBP11.68□□□□□ -0.54
POLR1B-203ENST00000409894 GOLGA6L4A6NEF3 574 aa11.68□□□□□ -0.54
POLR1B-203ENST00000409894 KIAA2012Q0VF49 1180 aa11.67□□□□□ -0.54
POLR1B-203ENST00000409894 CHMP7Q8WUX9 453 aaPredicted RBP11.67□□□□□ -0.54
POLR1B-203ENST00000409894 GOLGA6L6A8MZA4 724 aa11.67□□□□□ -0.54
POLR1B-203ENST00000409894 TNNT3P45378 269 aaPredicted RBP11.66□□□□□ -0.54
POLR1B-203ENST00000409894 DRC7Q8IY82 874 aa11.66□□□□□ -0.54
POLR1B-203ENST00000409894 RSPH6AQ9H0K4 717 aa11.66□□□□□ -0.54
POLR1B-203ENST00000409894 GBP4Q96PP9 640 aa11.66□□□□□ -0.54
POLR1B-203ENST00000409894 TIMELESSQ9UNS1 1208 aa11.65□□□□□ -0.54
POLR1B-203ENST00000409894 CDCA8Q53HL2 280 aa11.65□□□□□ -0.54
POLR1B-203ENST00000409894 NACADO15069 1562 aa11.65□□□□□ -0.55
POLR1B-203ENST00000409894 RCAN3Q9UKA8 241 aa11.64□□□□□ -0.55
POLR1B-203ENST00000409894 MAPK8IP3Q9UPT6 1336 aa11.64□□□□□ -0.55
POLR1B-203ENST00000409894 ZCCHC6Q5VYS8 1495 aaKnown RBP11.64□□□□□ -0.55
POLR1B-203ENST00000409894 FGD1P98174 961 aa11.64□□□□□ -0.55
POLR1B-203ENST00000409894 USP35Q9P2H5 1018 aa11.63□□□□□ -0.55
POLR1B-203ENST00000409894 MS4A1P11836 297 aa11.63□□□□□ -0.55
POLR1B-203ENST00000409894 KCNJ4P48050 445 aa11.62□□□□□ -0.55
POLR1B-203ENST00000409894 GOLGA3Q08378 1498 aa11.62□□□□□ -0.55
POLR1B-203ENST00000409894 PLEKHG5O94827 1062 aa11.62□□□□□ -0.55
POLR1B-203ENST00000409894 GSE1Q14687 1217 aa11.61□□□□□ -0.55
POLR1B-203ENST00000409894 TNIKQ9UKE5 1360 aa11.61□□□□□ -0.55
POLR1B-203ENST00000409894 KCNH8Q96L42 1107 aa11.61□□□□□ -0.55
POLR1B-203ENST00000409894 SLC4A3P48751 1232 aa11.6□□□□□ -0.55
POLR1B-203ENST00000409894 HSPA5P11021 654 aaKnown RBP11.6□□□□□ -0.55
POLR1B-203ENST00000409894 CHMP4BQ9H444 224 aaKnown RBP11.6□□□□□ -0.55
POLR1B-203ENST00000409894 NUDCQ9Y266 331 aa11.6□□□□□ -0.55
POLR1B-203ENST00000409894 U2SURPO15042 1029 aaKnown RBP11.59□□□□□ -0.55
POLR1B-203ENST00000409894 NAP1L2Q9ULW6 460 aaPredicted RBP11.59□□□□□ -0.55
POLR1B-203ENST00000409894 TULP1O00294 542 aaPredicted RBP11.57□□□□□ -0.56
POLR1B-203ENST00000409894 FANCIQ9NVI1 1328 aa11.57□□□□□ -0.56
POLR1B-203ENST00000409894 EEA1Q15075 1411 aa11.57□□□□□ -0.56
POLR1B-203ENST00000409894 MFAP1P55081 439 aaKnown RBP11.56□□□□□ -0.56
POLR1B-203ENST00000409894 CALD1Q05682 793 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms