RNA–Protein interactions for RNA: ENST00000409886.3

RGPD3-202, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD3, Length 5,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-202ENST00000409886 POLA1P09884 1462 aaPredicted RBP5.53□□□□□ -1.52
RGPD3-202ENST00000409886 HRCP23327 699 aa5.53□□□□□ -1.52
RGPD3-202ENST00000409886 ADAMTS12P58397 1594 aa5.53□□□□□ -1.52
RGPD3-202ENST00000409886 ADAMTSL3P82987 1691 aa5.53□□□□□ -1.52
RGPD3-202ENST00000409886 SCAF1Q9H7N4 1312 aaKnown RBP5.52□□□□□ -1.53
RGPD3-202ENST00000409886 PCGF6Q9BYE7 350 aa5.52□□□□□ -1.53
RGPD3-202ENST00000409886 ADCY10Q96PN6 1610 aa5.52□□□□□ -1.53
RGPD3-202ENST00000409886 AQRO60306 1485 aaKnown RBP eCLIP5.52□□□□□ -1.53
RGPD3-202ENST00000409886 PCF11O94913 1555 aaKnown RBP5.51□□□□□ -1.53
RGPD3-202ENST00000409886 TEX14Q8IWB6 1497 aa5.5□□□□□ -1.53
RGPD3-202ENST00000409886 GRIN2AQ12879 1464 aa5.49□□□□□ -1.53
RGPD3-202ENST00000409886 SRCAPQ6ZRS2 3230 aa5.47□□□□□ -1.53
RGPD3-202ENST00000409886 TSPOAP1O95153 1857 aa5.47□□□□□ -1.53
RGPD3-202ENST00000409886 UTRNP46939 3433 aa5.47□□□□□ -1.53
RGPD3-202ENST00000409886 PCNTO95613 3336 aa5.47□□□□□ -1.53
RGPD3-202ENST00000409886 LOC105371045A0A1W2PR82 267 aa5.46□□□□□ -1.54
RGPD3-202ENST00000409886 RUSC2Q8N2Y8 1516 aa5.46□□□□□ -1.54
RGPD3-202ENST00000409886 CFAP43Q8NDM7 1665 aa5.46□□□□□ -1.54
RGPD3-202ENST00000409886 ABCA10Q8WWZ4 1543 aa5.45□□□□□ -1.54
RGPD3-202ENST00000409886 UHRF1BP1LA0JNW5 1464 aa5.45□□□□□ -1.54
RGPD3-202ENST00000409886 PLB1Q6P1J6 1458 aa5.45□□□□□ -1.54
RGPD3-202ENST00000409886 DISP3Q9P2K9 1392 aa5.45□□□□□ -1.54
RGPD3-202ENST00000409886 ILDR2Q71H61 639 aa5.45□□□□□ -1.54
RGPD3-202ENST00000409886 BCORL1Q5H9F3 1711 aa5.44□□□□□ -1.54
RGPD3-202ENST00000409886 SOGA1O94964 1423 aa5.43□□□□□ -1.54
RGPD3-202ENST00000409886 ERICH3Q5RHP9 1530 aa5.43□□□□□ -1.54
RGPD3-202ENST00000409886 SUPT5HO00267 1087 aaKnown RBP5.41□□□□□ -1.54
RGPD3-202ENST00000409886 FGD5Q6ZNL6 1462 aa5.41□□□□□ -1.54
RGPD3-202ENST00000409886 PREX1Q8TCU6 1659 aa5.41□□□□□ -1.54
RGPD3-202ENST00000409886 CHMP7Q8WUX9 453 aaPredicted RBP5.41□□□□□ -1.54
RGPD3-202ENST00000409886 KIF21BO75037 1637 aa5.41□□□□□ -1.54
RGPD3-202ENST00000409886 MAGI3Q5TCQ9 1506 aa5.4□□□□□ -1.55
RGPD3-202ENST00000409886 CENPFP49454 3210 aa5.4□□□□□ -1.55
RGPD3-202ENST00000409886 FHAD1B1AJZ9 1412 aa5.39□□□□□ -1.55
RGPD3-202ENST00000409886 PTPRMP28827 1452 aa5.39□□□□□ -1.55
RGPD3-202ENST00000409886 FAM69CQ0P6D2 419 aa5.39□□□□□ -1.55
RGPD3-202ENST00000409886 RAD54L2Q9Y4B4 1467 aa5.39□□□□□ -1.55
RGPD3-202ENST00000409886 CUL7Q14999 1698 aa5.38□□□□□ -1.55
RGPD3-202ENST00000409886 ABCC2Q92887 1545 aa5.38□□□□□ -1.55
RGPD3-202ENST00000409886 CERKQ8TCT0 537 aa5.38□□□□□ -1.55
RGPD3-202ENST00000409886 ARAP3Q8WWN8 1544 aa5.37□□□□□ -1.55
RGPD3-202ENST00000409886 EPRSP07814 1512 aaKnown RBP5.37□□□□□ -1.55
RGPD3-202ENST00000409886 TTC37Q6PGP7 1564 aa5.36□□□□□ -1.55
RGPD3-202ENST00000409886 CUX1P39880 1505 aa5.36□□□□□ -1.55
RGPD3-202ENST00000409886 CCDC88BA6NC98 1476 aa5.36□□□□□ -1.55
RGPD3-202ENST00000409886 PHLDB1Q86UU1 1377 aa5.36□□□□□ -1.55
RGPD3-202ENST00000409886 BIVM-ERCC5R4GMW8 1640 aa5.36□□□□□ -1.55
RGPD3-202ENST00000409886 MED1Q15648 1581 aaPredicted RBP5.36□□□□□ -1.55
RGPD3-202ENST00000409886 PRG4Q92954 1404 aaPredicted RBP5.36□□□□□ -1.55
RGPD3-202ENST00000409886 CHIC1Q5VXU3 224 aa5.35□□□□□ -1.55
RGPD3-202ENST00000409886 PTPRTO14522 1441 aa5.35□□□□□ -1.55
RGPD3-202ENST00000409886 MADDQ8WXG6 1647 aa5.35□□□□□ -1.55
RGPD3-202ENST00000409886 NPM1P06748 294 aaKnown RBP eCLIP5.34□□□□□ -1.55
RGPD3-202ENST00000409886 FBLN2P98095 1184 aa5.34□□□□□ -1.55
RGPD3-202ENST00000409886 TDRD9Q8NDG6 1382 aaKnown RBP5.33□□□□□ -1.56
RGPD3-202ENST00000409886 RIMS1Q86UR5 1692 aaKnown RBP5.33□□□□□ -1.56
RGPD3-202ENST00000409886 ZCCHC11Q5TAX3 1644 aaKnown RBP5.33□□□□□ -1.56
RGPD3-202ENST00000409886 STRCQ7RTU9 1775 aa5.33□□□□□ -1.56
RGPD3-202ENST00000409886 KDM5BQ9UGL1 1544 aa5.33□□□□□ -1.56
RGPD3-202ENST00000409886 LTBP4Q8N2S1 1624 aa5.33□□□□□ -1.56
RGPD3-202ENST00000409886 ARHGEF40Q8TER5 1519 aa5.33□□□□□ -1.56
RGPD3-202ENST00000409886 COL17A1Q9UMD9 1497 aaPredicted RBP5.32□□□□□ -1.56
RGPD3-202ENST00000409886 NEUROD1Q13562 356 aa5.31□□□□□ -1.56
RGPD3-202ENST00000409886 ASXL2Q76L83 1435 aa5.31□□□□□ -1.56
RGPD3-202ENST00000409886 CFAP74Q9C0B2 1584 aa5.31□□□□□ -1.56
RGPD3-202ENST00000409886 EP400Q96L91 3159 aa5.3□□□□□ -1.56
RGPD3-202ENST00000409886 FER1L4A9Z1Z3 1794 aa5.29□□□□□ -1.56
RGPD3-202ENST00000409886 ZMYM4Q5VZL5 1548 aa5.29□□□□□ -1.56
RGPD3-202ENST00000409886 FRMPD1Q5SYB0 1578 aa5.27□□□□□ -1.57
RGPD3-202ENST00000409886 DMRT2Q9Y5R5 561 aa5.27□□□□□ -1.57
RGPD3-202ENST00000409886 ABCA9Q8IUA7 1624 aa5.26□□□□□ -1.57
RGPD3-202ENST00000409886 WDR7Q9Y4E6 1490 aa5.26□□□□□ -1.57
RGPD3-202ENST00000409886 YEATS2Q9ULM3 1422 aa5.25□□□□□ -1.57
RGPD3-202ENST00000409886 NEO1Q92859 1461 aa5.25□□□□□ -1.57
RGPD3-202ENST00000409886 FANCAO15360 1455 aa5.25□□□□□ -1.57
RGPD3-202ENST00000409886 ZNF142P52746 1687 aaPredicted RBP5.25□□□□□ -1.57
RGPD3-202ENST00000409886 RICTORQ6R327 1708 aa5.24□□□□□ -1.57
RGPD3-202ENST00000409886 EFCAB5A4FU69 1503 aa5.24□□□□□ -1.57
RGPD3-202ENST00000409886 ARHGEF12Q9NZN5 1544 aa5.24□□□□□ -1.57
RGPD3-202ENST00000409886 TNIKQ9UKE5 1360 aa5.23□□□□□ -1.57
RGPD3-202ENST00000409886 POGZQ7Z3K3 1410 aa5.23□□□□□ -1.57
RGPD3-202ENST00000409886 REREQ9P2R6 1566 aa5.23□□□□□ -1.57
RGPD3-202ENST00000409886 MROH2AA6NES4 1674 aa5.22□□□□□ -1.57
RGPD3-202ENST00000409886 UACAQ9BZF9 1416 aa5.22□□□□□ -1.57
RGPD3-202ENST00000409886 EHMT2Q96KQ7 1210 aa5.22□□□□□ -1.57
RGPD3-202ENST00000409886 MAGI2Q86UL8 1455 aa5.22□□□□□ -1.57
RGPD3-202ENST00000409886 CARMIL2Q6F5E8 1435 aa5.21□□□□□ -1.57
RGPD3-202ENST00000409886 JPH4Q96JJ6 628 aa5.21□□□□□ -1.58
RGPD3-202ENST00000409886 WRNQ14191 1432 aaPredicted RBP eCLIP5.21□□□□□ -1.58
RGPD3-202ENST00000409886 UGGT2Q9NYU1 1516 aa5.2□□□□□ -1.58
RGPD3-202ENST00000409886 CPS1P31327 1500 aa5.2□□□□□ -1.58
RGPD3-202ENST00000409886 KIAA0556O60303 1618 aa5.19□□□□□ -1.58
RGPD3-202ENST00000409886 PTPRGP23470 1445 aa5.19□□□□□ -1.58
RGPD3-202ENST00000409886 IQGAP2Q13576 1575 aa5.19□□□□□ -1.58
RGPD3-202ENST00000409886 ABCA8O94911 1581 aa5.18□□□□□ -1.58
RGPD3-202ENST00000409886 SYNMO15061 1565 aa5.18□□□□□ -1.58
RGPD3-202ENST00000409886 CD109Q6YHK3 1445 aa5.17□□□□□ -1.58
RGPD3-202ENST00000409886 PLA2R1Q13018 1463 aa5.17□□□□□ -1.58
RGPD3-202ENST00000409886 FHOD3Q2V2M9 1422 aa5.16□□□□□ -1.58
RGPD3-202ENST00000409886 ZFYVE16Q7Z3T8 1539 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms