RNA–Protein interactions for RNA: ENST00000409741.5

SLC3A1-207, Transcript of solute carrier family 3 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC3A1, Length 1,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1-207ENST00000409741 CHD1O14646 1710 aa19.66■□□□□ 0.74
SLC3A1-207ENST00000409741 NUP160Q12769 1436 aa19.65■□□□□ 0.74
SLC3A1-207ENST00000409741 CEP170Q5SW79 1584 aa19.65■□□□□ 0.74
SLC3A1-207ENST00000409741 CTTNBP2Q8WZ74 1663 aa19.63■□□□□ 0.73
SLC3A1-207ENST00000409741 CLIP1P30622 1438 aa19.62■□□□□ 0.73
SLC3A1-207ENST00000409741 KIAA0586Q9BVV6 1533 aa19.61■□□□□ 0.73
SLC3A1-207ENST00000409741 IQGAP2Q13576 1575 aa19.57■□□□□ 0.72
SLC3A1-207ENST00000409741 ARHGAP35Q9NRY4 1499 aa19.53■□□□□ 0.72
SLC3A1-207ENST00000409741 P3H3Q8IVL6 736 aa19.51■□□□□ 0.71
SLC3A1-207ENST00000409741 JPH4Q96JJ6 628 aa19.49■□□□□ 0.71
SLC3A1-207ENST00000409741 UGGT2Q9NYU1 1516 aa19.49■□□□□ 0.71
SLC3A1-207ENST00000409741 ARAP1Q96P48 1450 aa19.48■□□□□ 0.71
SLC3A1-207ENST00000409741 EFCAB5A4FU69 1503 aa19.47■□□□□ 0.71
SLC3A1-207ENST00000409741 CLASP1Q7Z460 1538 aa19.47■□□□□ 0.71
SLC3A1-207ENST00000409741 OSCARQ8IYS5 282 aa19.46■□□□□ 0.71
SLC3A1-207ENST00000409741 SAMD9Q5K651 1589 aa19.45■□□□□ 0.7
SLC3A1-207ENST00000409741 FHOD3Q2V2M9 1422 aa19.45■□□□□ 0.7
SLC3A1-207ENST00000409741 DISP1Q96F81 1524 aa19.43■□□□□ 0.7
SLC3A1-207ENST00000409741 PRG4Q92954 1404 aaPredicted RBP19.4■□□□□ 0.7
SLC3A1-207ENST00000409741 KIAA0556O60303 1618 aa19.39■□□□□ 0.69
SLC3A1-207ENST00000409741 SHROOM2Q13796 1616 aa19.39■□□□□ 0.69
SLC3A1-207ENST00000409741 VPS8Q8N3P4 1428 aa19.39■□□□□ 0.69
SLC3A1-207ENST00000409741 CARMIL2Q6F5E8 1435 aa19.37■□□□□ 0.69
SLC3A1-207ENST00000409741 TTBK1Q5TCY1 1321 aaPredicted RBP19.33■□□□□ 0.69
SLC3A1-207ENST00000409741 ERCC6L2Q5T890 1561 aa19.33■□□□□ 0.68
SLC3A1-207ENST00000409741 FMN1Q68DA7 1419 aa19.3■□□□□ 0.68
SLC3A1-207ENST00000409741 PCF11O94913 1555 aaKnown RBP19.25■□□□□ 0.67
SLC3A1-207ENST00000409741 AEBP2Q6ZN18 517 aaPredicted RBP19.25■□□□□ 0.67
SLC3A1-207ENST00000409741 PTPRGP23470 1445 aa19.24■□□□□ 0.67
SLC3A1-207ENST00000409741 CASKIN1Q8WXD9 1431 aa19.23■□□□□ 0.67
SLC3A1-207ENST00000409741 ATP1B4Q9UN42 357 aaPredicted RBP19.23■□□□□ 0.67
SLC3A1-207ENST00000409741 FYCO1Q9BQS8 1478 aa19.2■□□□□ 0.66
SLC3A1-207ENST00000409741 PLB1Q6P1J6 1458 aa19.19■□□□□ 0.66
SLC3A1-207ENST00000409741 PPARGC1BQ86YN6 1023 aaKnown RBP19.18■□□□□ 0.66
SLC3A1-207ENST00000409741 APLP2Q06481 763 aa19.16■□□□□ 0.66
SLC3A1-207ENST00000409741 RAPGEF6Q8TEU7 1601 aa19.15■□□□□ 0.66
SLC3A1-207ENST00000409741 ARID3CA6NKF2 412 aa19.15■□□□□ 0.66
SLC3A1-207ENST00000409741 ABCA8O94911 1581 aa19.14■□□□□ 0.65
SLC3A1-207ENST00000409741 ARHGEF11O15085 1522 aa19.14■□□□□ 0.65
SLC3A1-207ENST00000409741 NUP153P49790 1475 aaKnown RBP19.12■□□□□ 0.65
SLC3A1-207ENST00000409741 HECW1Q76N89 1606 aa19.12■□□□□ 0.65
SLC3A1-207ENST00000409741 UACAQ9BZF9 1416 aa19.11■□□□□ 0.65
SLC3A1-207ENST00000409741 KANK4Q5T7N3 995 aaPredicted RBP19.1■□□□□ 0.65
SLC3A1-207ENST00000409741 TIAM1Q13009 1591 aa19.09■□□□□ 0.65
SLC3A1-207ENST00000409741 EPRSP07814 1512 aaKnown RBP19.09■□□□□ 0.65
SLC3A1-207ENST00000409741 LRRIQ1Q96JM4 1722 aa19.08■□□□□ 0.65
SLC3A1-207ENST00000409741 MAP3K1Q13233 1512 aa19.08■□□□□ 0.64
SLC3A1-207ENST00000409741 CDK13Q14004 1512 aaKnown RBP19.08■□□□□ 0.64
SLC3A1-207ENST00000409741 RIMBP3CA6NJZ7 1639 aa19.06■□□□□ 0.64
SLC3A1-207ENST00000409741 RIMBP3BA6NNM3 1639 aa19.06■□□□□ 0.64
SLC3A1-207ENST00000409741 RIMBP3Q9UFD9 1639 aa19.06■□□□□ 0.64
SLC3A1-207ENST00000409741 CCDC18Q5T9S5 1454 aa19.06■□□□□ 0.64
SLC3A1-207ENST00000409741 ABCC2Q92887 1545 aa19.05■□□□□ 0.64
SLC3A1-207ENST00000409741 CFAP43Q8NDM7 1665 aa19.05■□□□□ 0.64
SLC3A1-207ENST00000409741 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.03■□□□□ 0.64
SLC3A1-207ENST00000409741 HNRNPUL2Q1KMD3 747 aaKnown RBP19.03■□□□□ 0.64
SLC3A1-207ENST00000409741 UHRF1BP1LA0JNW5 1464 aa19.03■□□□□ 0.64
SLC3A1-207ENST00000409741 ATP10BO94823 1461 aa19.02■□□□□ 0.64
SLC3A1-207ENST00000409741 LRRC9Q6ZRR7 1453 aa19.02■□□□□ 0.64
SLC3A1-207ENST00000409741 ADCY10Q96PN6 1610 aa18.99■□□□□ 0.63
SLC3A1-207ENST00000409741 CYB5RLQ6IPT4 315 aa18.99■□□□□ 0.63
SLC3A1-207ENST00000409741 MAGI3Q5TCQ9 1506 aa18.99■□□□□ 0.63
SLC3A1-207ENST00000409741 MTUS2Q5JR59 1369 aa18.98■□□□□ 0.63
SLC3A1-207ENST00000409741 KDM5BQ9UGL1 1544 aa18.95■□□□□ 0.62
SLC3A1-207ENST00000409741 CDK11AQ9UQ88 783 aaPredicted RBP18.94■□□□□ 0.62
SLC3A1-207ENST00000409741 EHBP1L1Q8N3D4 1523 aa18.92■□□□□ 0.62
SLC3A1-207ENST00000409741 ZCCHC11Q5TAX3 1644 aaKnown RBP18.91■□□□□ 0.62
SLC3A1-207ENST00000409741 PLEKHD1A6NEE1 506 aa18.91■□□□□ 0.62
SLC3A1-207ENST00000409741 TROQ12816 1431 aaPredicted RBP18.9■□□□□ 0.62
SLC3A1-207ENST00000409741 NCOA2Q15596 1464 aa18.86■□□□□ 0.61
SLC3A1-207ENST00000409741 NPM1P06748 294 aaKnown RBP eCLIP18.86■□□□□ 0.61
SLC3A1-207ENST00000409741 PHLDB1Q86UU1 1377 aa18.85■□□□□ 0.61
SLC3A1-207ENST00000409741 DNAJC5Q9H3Z4 198 aa18.85■□□□□ 0.61
SLC3A1-207ENST00000409741 SUPT6HQ7KZ85 1726 aaKnown RBP18.84■□□□□ 0.61
SLC3A1-207ENST00000409741 TRIM26Q12899 539 aaPredicted RBP18.83■□□□□ 0.6
SLC3A1-207ENST00000409741 KIF14Q15058 1648 aa18.81■□□□□ 0.6
SLC3A1-207ENST00000409741 ASXL2Q76L83 1435 aa18.81■□□□□ 0.6
SLC3A1-207ENST00000409741 KCNH8Q96L42 1107 aa18.8■□□□□ 0.6
SLC3A1-207ENST00000409741 WDR7Q9Y4E6 1490 aa18.78■□□□□ 0.6
SLC3A1-207ENST00000409741 ABCC10Q5T3U5 1492 aa18.76■□□□□ 0.59
SLC3A1-207ENST00000409741 MYOM3Q5VTT5 1437 aa18.75■□□□□ 0.59
SLC3A1-207ENST00000409741 CCNB3Q8WWL7 1395 aa18.75■□□□□ 0.59
SLC3A1-207ENST00000409741 PCGF6Q9BYE7 350 aa18.74■□□□□ 0.59
SLC3A1-207ENST00000409741 RRBP1Q9P2E9 1410 aaKnown RBP18.74■□□□□ 0.59
SLC3A1-207ENST00000409741 FGD6Q6ZV73 1430 aa18.72■□□□□ 0.59
SLC3A1-207ENST00000409741 MAPKBP1O60336 1514 aa18.72■□□□□ 0.59
SLC3A1-207ENST00000409741 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.72■□□□□ 0.59
SLC3A1-207ENST00000409741 GPATCH8Q9UKJ3 1502 aaKnown RBP18.71■□□□□ 0.58
SLC3A1-207ENST00000409741 TTC37Q6PGP7 1564 aa18.7■□□□□ 0.58
SLC3A1-207ENST00000409741 FAM50AQ14320 339 aaKnown RBP18.67■□□□□ 0.58
SLC3A1-207ENST00000409741 CFDP1Q9UEE9 299 aaPredicted RBP18.67■□□□□ 0.58
SLC3A1-207ENST00000409741 MIA2Q96PC5 1412 aa18.66■□□□□ 0.58
SLC3A1-207ENST00000409741 ZNF644Q9H582 1327 aaPredicted RBP18.64■□□□□ 0.57
SLC3A1-207ENST00000409741 CDC42BPAQ5VT25 1732 aa18.64■□□□□ 0.57
SLC3A1-207ENST00000409741 PTPN23Q9H3S7 1636 aa18.63■□□□□ 0.57
SLC3A1-207ENST00000409741 ITSN2Q9NZM3 1697 aa18.63■□□□□ 0.57
SLC3A1-207ENST00000409741 ZNF777Q9ULD5 760 aaPredicted RBP18.63■□□□□ 0.57
SLC3A1-207ENST00000409741 TCOF1Q13428 1488 aaKnown RBP18.62■□□□□ 0.57
SLC3A1-207ENST00000409741 ABCA9Q8IUA7 1624 aa18.62■□□□□ 0.57
SLC3A1-207ENST00000409741 PLCH2O75038 1416 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms