RNA–Protein interactions for RNA: ENST00000409687.4

SAPCD2-201, Transcript of suppressor APC domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAPCD2, Length 3,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAPCD2-201ENST00000409687 RAB3GAP2Q9H2M9 1393 aa20.8■□□□□ 0.92
SAPCD2-201ENST00000409687 CUX2O14529 1486 aa20.78■□□□□ 0.92
SAPCD2-201ENST00000409687 FOXD1Q16676 465 aa20.78■□□□□ 0.92
SAPCD2-201ENST00000409687 MRS2Q9HD23 443 aa20.77■□□□□ 0.92
SAPCD2-201ENST00000409687 KDM2AQ9Y2K7 1162 aa20.73■□□□□ 0.91
SAPCD2-201ENST00000409687 CARMIL1Q5VZK9 1371 aa20.72■□□□□ 0.91
SAPCD2-201ENST00000409687 NPM2Q86SE8 214 aaKnown RBP20.71■□□□□ 0.91
SAPCD2-201ENST00000409687 TSHZ2Q9NRE2 1034 aa20.69■□□□□ 0.9
SAPCD2-201ENST00000409687 ATAD2BQ9ULI0 1458 aa20.69■□□□□ 0.9
SAPCD2-201ENST00000409687 SLC4A1APQ9BWU0 796 aaKnown RBP20.68■□□□□ 0.9
SAPCD2-201ENST00000409687 CLSPNQ9HAW4 1339 aa20.67■□□□□ 0.9
SAPCD2-201ENST00000409687 NBR1Q14596 966 aa20.64■□□□□ 0.9
SAPCD2-201ENST00000409687 EIF4G2P78344 907 aaKnown RBP eCLIP20.63■□□□□ 0.89
SAPCD2-201ENST00000409687 SETD5Q9C0A6 1442 aa20.61■□□□□ 0.89
SAPCD2-201ENST00000409687 SYNJ1O43426 1573 aa20.59■□□□□ 0.89
SAPCD2-201ENST00000409687 B4GALNT3Q6L9W6 998 aa20.58■□□□□ 0.89
SAPCD2-201ENST00000409687 ANP32EQ9BTT0 268 aa20.58■□□□□ 0.88
SAPCD2-201ENST00000409687 FHOD3Q2V2M9 1422 aa20.56■□□□□ 0.88
SAPCD2-201ENST00000409687 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.56■□□□□ 0.88
SAPCD2-201ENST00000409687 KIF21BO75037 1637 aa20.55■□□□□ 0.88
SAPCD2-201ENST00000409687 RTL5Q5HYW3 569 aaPredicted RBP20.54■□□□□ 0.88
SAPCD2-201ENST00000409687 PPP1R15AO75807 674 aaPredicted RBP20.54■□□□□ 0.88
SAPCD2-201ENST00000409687 RBM19Q9Y4C8 960 aaKnown RBP20.54■□□□□ 0.88
SAPCD2-201ENST00000409687 TDRD9Q8NDG6 1382 aaKnown RBP20.54■□□□□ 0.88
SAPCD2-201ENST00000409687 DAXXQ9UER7 740 aaPredicted RBP20.52■□□□□ 0.88
SAPCD2-201ENST00000409687 TMC1Q8TDI8 760 aa20.52■□□□□ 0.88
SAPCD2-201ENST00000409687 CCDC136Q96JN2 1154 aa20.51■□□□□ 0.87
SAPCD2-201ENST00000409687 HSPA5P11021 654 aaKnown RBP20.5■□□□□ 0.87
SAPCD2-201ENST00000409687 ARAP1Q96P48 1450 aa20.5■□□□□ 0.87
SAPCD2-201ENST00000409687 RGL3Q3MIN7 710 aa20.49■□□□□ 0.87
SAPCD2-201ENST00000409687 SENP3Q9H4L4 574 aaPredicted RBP20.46■□□□□ 0.87
SAPCD2-201ENST00000409687 BCL11AQ9H165 835 aa20.43■□□□□ 0.86
SAPCD2-201ENST00000409687 PHLDB1Q86UU1 1377 aa20.42■□□□□ 0.86
SAPCD2-201ENST00000409687 FHAD1B1AJZ9 1412 aa20.39■□□□□ 0.86
SAPCD2-201ENST00000409687 IGF1RP08069 1367 aa20.38■□□□□ 0.85
SAPCD2-201ENST00000409687 ANP32AP39687 249 aaKnown RBP20.38■□□□□ 0.85
SAPCD2-201ENST00000409687 ARHGAP35Q9NRY4 1499 aa20.37■□□□□ 0.85
SAPCD2-201ENST00000409687 EIF4G1Q04637 1599 aaKnown RBP20.37■□□□□ 0.85
SAPCD2-201ENST00000409687 L3MBTL2Q969R5 705 aa20.36■□□□□ 0.85
SAPCD2-201ENST00000409687 CFDP1Q9UEE9 299 aaPredicted RBP20.34■□□□□ 0.85
SAPCD2-201ENST00000409687 CHMP7Q8WUX9 453 aaPredicted RBP20.34■□□□□ 0.85
SAPCD2-201ENST00000409687 CCER2I3L3R5 266 aa20.31■□□□□ 0.84
SAPCD2-201ENST00000409687 MPHOSPH9Q99550 1183 aa20.3■□□□□ 0.84
SAPCD2-201ENST00000409687 TSPY4P0CV99 314 aa20.29■□□□□ 0.84
SAPCD2-201ENST00000409687 TSPY10P0CW01 314 aa20.29■□□□□ 0.84
SAPCD2-201ENST00000409687 CARD11Q9BXL7 1154 aa20.28■□□□□ 0.84
SAPCD2-201ENST00000409687 CADPSQ9ULU8 1353 aa20.28■□□□□ 0.84
SAPCD2-201ENST00000409687 RAD54L2Q9Y4B4 1467 aa20.27■□□□□ 0.84
SAPCD2-201ENST00000409687 PPP4R2Q9NY27 417 aa20.24■□□□□ 0.83
SAPCD2-201ENST00000409687 CHGAP10645 457 aaKnown RBP20.22■□□□□ 0.83
SAPCD2-201ENST00000409687 TIMELESSQ9UNS1 1208 aa20.22■□□□□ 0.83
SAPCD2-201ENST00000409687 ZBTB47Q9UFB7 747 aaPredicted RBP20.21■□□□□ 0.83
SAPCD2-201ENST00000409687 DCAF11Q8TEB1 546 aa20.2■□□□□ 0.82
SAPCD2-201ENST00000409687 CC2D1BQ5T0F9 858 aaKnown RBP20.2■□□□□ 0.82
SAPCD2-201ENST00000409687 PRXQ9BXM0 1461 aa20.2■□□□□ 0.82
SAPCD2-201ENST00000409687 CCDC184Q52MB2 194 aa20.2■□□□□ 0.82
SAPCD2-201ENST00000409687 FGD5Q6ZNL6 1462 aa20.19■□□□□ 0.82
SAPCD2-201ENST00000409687 PKD2Q13563 968 aa20.18■□□□□ 0.82
SAPCD2-201ENST00000409687 ZNF644Q9H582 1327 aaPredicted RBP20.18■□□□□ 0.82
SAPCD2-201ENST00000409687 CANXP27824 592 aaKnown RBP20.17■□□□□ 0.82
SAPCD2-201ENST00000409687 RRBP1Q9P2E9 1410 aaKnown RBP20.15■□□□□ 0.82
SAPCD2-201ENST00000409687 LAS1LQ9Y4W2 734 aaKnown RBP20.15■□□□□ 0.82
SAPCD2-201ENST00000409687 PLEKHD1A6NEE1 506 aa20.14■□□□□ 0.82
SAPCD2-201ENST00000409687 CUX1P39880 1505 aa20.14■□□□□ 0.81
SAPCD2-201ENST00000409687 LRRC9Q6ZRR7 1453 aa20.13■□□□□ 0.81
SAPCD2-201ENST00000409687 WDR97A6NE52 1622 aa20.13■□□□□ 0.81
SAPCD2-201ENST00000409687 ARXQ96QS3 562 aa20.11■□□□□ 0.81
SAPCD2-201ENST00000409687 UNC13AQ9UPW8 1703 aa20.11■□□□□ 0.81
SAPCD2-201ENST00000409687 CCDC18Q5T9S5 1454 aa20.11■□□□□ 0.81
SAPCD2-201ENST00000409687 WASHC2AQ641Q2 1341 aa20.1■□□□□ 0.81
SAPCD2-201ENST00000409687 FMN1Q68DA7 1419 aa20.09■□□□□ 0.81
SAPCD2-201ENST00000409687 RTN4Q9NQC3 1192 aaKnown RBP20.09■□□□□ 0.81
SAPCD2-201ENST00000409687 BICRAQ9NZM4 1560 aa20.09■□□□□ 0.81
SAPCD2-201ENST00000409687 PRKRIP1Q9H875 184 aaPredicted RBP20.09■□□□□ 0.81
SAPCD2-201ENST00000409687 DNAJC5BQ9UF47 199 aa20.08■□□□□ 0.8
SAPCD2-201ENST00000409687 FANCD2Q9BXW9 1451 aa20.07■□□□□ 0.8
SAPCD2-201ENST00000409687 TOP2BQ02880 1626 aa20.04■□□□□ 0.8
SAPCD2-201ENST00000409687 NEUROD2Q15784 382 aa20.03■□□□□ 0.8
SAPCD2-201ENST00000409687 WDR43Q15061 677 aaKnown RBP eCLIP20.02■□□□□ 0.8
SAPCD2-201ENST00000409687 FGD6Q6ZV73 1430 aa20.02■□□□□ 0.8
SAPCD2-201ENST00000409687 TNNT2P45379 298 aaPredicted RBP20.02■□□□□ 0.79
SAPCD2-201ENST00000409687 NOP58Q9Y2X3 529 aaKnown RBP20.01■□□□□ 0.79
SAPCD2-201ENST00000409687 NESP48681 1621 aa20.01■□□□□ 0.79
SAPCD2-201ENST00000409687 RGS3P49796 1198 aa19.99■□□□□ 0.79
SAPCD2-201ENST00000409687 HNRNPMP52272 730 aaKnown RBP eCLIP19.99■□□□□ 0.79
SAPCD2-201ENST00000409687 NCAPD3P42695 1498 aa19.98■□□□□ 0.79
SAPCD2-201ENST00000409687 ST20-MTHFSA0A0A6YYL1 179 aa19.97■□□□□ 0.79
SAPCD2-201ENST00000409687 ERICH3Q5RHP9 1530 aa19.97■□□□□ 0.79
SAPCD2-201ENST00000409687 C11orf95C9JLR9 678 aaPredicted RBP19.96■□□□□ 0.79
SAPCD2-201ENST00000409687 NUP155O75694 1391 aa19.96■□□□□ 0.79
SAPCD2-201ENST00000409687 DEKP35659 375 aaKnown RBP19.96■□□□□ 0.79
SAPCD2-201ENST00000409687 NBPF8Q3BBV2 869 aa19.96■□□□□ 0.79
SAPCD2-201ENST00000409687 CFTRP13569 1480 aa19.96■□□□□ 0.79
SAPCD2-201ENST00000409687 PLIN1O60240 522 aa19.95■□□□□ 0.78
SAPCD2-201ENST00000409687 KIF7Q2M1P5 1343 aa19.92■□□□□ 0.78
SAPCD2-201ENST00000409687 PDS5BQ9NTI5 1447 aa19.9■□□□□ 0.78
SAPCD2-201ENST00000409687 EIF5BO60841 1220 aaKnown RBP19.9■□□□□ 0.78
SAPCD2-201ENST00000409687 UACAQ9BZF9 1416 aa19.88■□□□□ 0.77
SAPCD2-201ENST00000409687 NEFMP07197 916 aa19.88■□□□□ 0.77
SAPCD2-201ENST00000409687 TIAM1Q13009 1591 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms