RNA–Protein interactions for RNA: ENST00000409606.5

R3HDM1-203, Transcript of R3H domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene R3HDM1, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-203ENST00000409606 AQRO60306 1485 aaKnown RBP eCLIP8.39□□□□□ -1.07
R3HDM1-203ENST00000409606 SNAPC4Q5SXM2 1469 aa8.39□□□□□ -1.07
R3HDM1-203ENST00000409606 ADCY10Q96PN6 1610 aa8.39□□□□□ -1.07
R3HDM1-203ENST00000409606 TNIKQ9UKE5 1360 aa8.38□□□□□ -1.07
R3HDM1-203ENST00000409606 DISP1Q96F81 1524 aa8.37□□□□□ -1.07
R3HDM1-203ENST00000409606 TRIM41Q8WV44 630 aa8.36□□□□□ -1.07
R3HDM1-203ENST00000409606 KIAA0586Q9BVV6 1533 aa8.35□□□□□ -1.07
R3HDM1-203ENST00000409606 ARAP1Q96P48 1450 aa8.35□□□□□ -1.07
R3HDM1-203ENST00000409606 OSCARQ8IYS5 282 aa8.34□□□□□ -1.07
R3HDM1-203ENST00000409606 ABCA8O94911 1581 aa8.34□□□□□ -1.07
R3HDM1-203ENST00000409606 ARHGEF11O15085 1522 aa8.33□□□□□ -1.08
R3HDM1-203ENST00000409606 ARHGAP35Q9NRY4 1499 aa8.32□□□□□ -1.08
R3HDM1-203ENST00000409606 RIMBP3CA6NJZ7 1639 aa8.31□□□□□ -1.08
R3HDM1-203ENST00000409606 RIMBP3BA6NNM3 1639 aa8.31□□□□□ -1.08
R3HDM1-203ENST00000409606 RIMBP3Q9UFD9 1639 aa8.31□□□□□ -1.08
R3HDM1-203ENST00000409606 KDM5BQ9UGL1 1544 aa8.3□□□□□ -1.08
R3HDM1-203ENST00000409606 CARMIL1Q5VZK9 1371 aa8.29□□□□□ -1.08
R3HDM1-203ENST00000409606 UHRF1BP1LA0JNW5 1464 aa8.29□□□□□ -1.08
R3HDM1-203ENST00000409606 PCF11O94913 1555 aaKnown RBP8.27□□□□□ -1.08
R3HDM1-203ENST00000409606 RAPGEF6Q8TEU7 1601 aa8.27□□□□□ -1.09
R3HDM1-203ENST00000409606 FYCO1Q9BQS8 1478 aa8.26□□□□□ -1.09
R3HDM1-203ENST00000409606 CSRNP3Q8WYN3 585 aa8.25□□□□□ -1.09
R3HDM1-203ENST00000409606 TDRD9Q8NDG6 1382 aaKnown RBP8.24□□□□□ -1.09
R3HDM1-203ENST00000409606 HECW1Q76N89 1606 aa8.24□□□□□ -1.09
R3HDM1-203ENST00000409606 TIAM1Q13009 1591 aa8.23□□□□□ -1.09
R3HDM1-203ENST00000409606 CEP162Q5TB80 1403 aa8.23□□□□□ -1.09
R3HDM1-203ENST00000409606 ERCC6L2Q5T890 1561 aa8.22□□□□□ -1.09
R3HDM1-203ENST00000409606 CROCC2H7BZ55 1655 aa8.21□□□□□ -1.1
R3HDM1-203ENST00000409606 AEBP2Q6ZN18 517 aaPredicted RBP8.21□□□□□ -1.1
R3HDM1-203ENST00000409606 CASKIN1Q8WXD9 1431 aa8.2□□□□□ -1.1
R3HDM1-203ENST00000409606 ZCCHC11Q5TAX3 1644 aaKnown RBP8.19□□□□□ -1.1
R3HDM1-203ENST00000409606 VPS8Q8N3P4 1428 aa8.19□□□□□ -1.1
R3HDM1-203ENST00000409606 ARAP3Q8WWN8 1544 aa8.19□□□□□ -1.1
R3HDM1-203ENST00000409606 MAGI3Q5TCQ9 1506 aa8.18□□□□□ -1.1
R3HDM1-203ENST00000409606 ABCC2Q92887 1545 aa8.18□□□□□ -1.1
R3HDM1-203ENST00000409606 CDC42BPAQ5VT25 1732 aa8.17□□□□□ -1.1
R3HDM1-203ENST00000409606 PPRC1Q5VV67 1664 aaKnown RBP8.17□□□□□ -1.1
R3HDM1-203ENST00000409606 MAPKBP1O60336 1514 aa8.17□□□□□ -1.1
R3HDM1-203ENST00000409606 BCORL1Q5H9F3 1711 aa8.16□□□□□ -1.1
R3HDM1-203ENST00000409606 GLI2P10070 1586 aa8.16□□□□□ -1.1
R3HDM1-203ENST00000409606 CCDC18Q5T9S5 1454 aa8.16□□□□□ -1.1
R3HDM1-203ENST00000409606 MAP3K4Q9Y6R4 1608 aa8.16□□□□□ -1.1
R3HDM1-203ENST00000409606 NUP153P49790 1475 aaKnown RBP8.15□□□□□ -1.1
R3HDM1-203ENST00000409606 ABCA9Q8IUA7 1624 aa8.15□□□□□ -1.1
R3HDM1-203ENST00000409606 CLIP1P30622 1438 aa8.15□□□□□ -1.1
R3HDM1-203ENST00000409606 PREX2Q70Z35 1606 aa8.15□□□□□ -1.11
R3HDM1-203ENST00000409606 ITSN2Q9NZM3 1697 aa8.14□□□□□ -1.11
R3HDM1-203ENST00000409606 CDC42BPBQ9Y5S2 1711 aa8.14□□□□□ -1.11
R3HDM1-203ENST00000409606 KIF13AQ9H1H9 1805 aa8.14□□□□□ -1.11
R3HDM1-203ENST00000409606 EHBP1L1Q8N3D4 1523 aa8.14□□□□□ -1.11
R3HDM1-203ENST00000409606 SUPT6HQ7KZ85 1726 aaKnown RBP8.13□□□□□ -1.11
R3HDM1-203ENST00000409606 FMN1Q68DA7 1419 aa8.12□□□□□ -1.11
R3HDM1-203ENST00000409606 TCOF1Q13428 1488 aaKnown RBP8.11□□□□□ -1.11
R3HDM1-203ENST00000409606 ABCC10Q5T3U5 1492 aa8.11□□□□□ -1.11
R3HDM1-203ENST00000409606 MAST1Q9Y2H9 1570 aa8.1□□□□□ -1.11
R3HDM1-203ENST00000409606 EPRSP07814 1512 aaKnown RBP8.1□□□□□ -1.11
R3HDM1-203ENST00000409606 MYO5CQ9NQX4 1742 aa8.09□□□□□ -1.11
R3HDM1-203ENST00000409606 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.09□□□□□ -1.11
R3HDM1-203ENST00000409606 GCC2Q8IWJ2 1684 aa8.09□□□□□ -1.11
R3HDM1-203ENST00000409606 ADGBQ8N7X0 1667 aa8.09□□□□□ -1.11
R3HDM1-203ENST00000409606 LRRC9Q6ZRR7 1453 aa8.08□□□□□ -1.12
R3HDM1-203ENST00000409606 KIF14Q15058 1648 aa8.07□□□□□ -1.12
R3HDM1-203ENST00000409606 ARHGEF5Q12774 1597 aa8.07□□□□□ -1.12
R3HDM1-203ENST00000409606 RRBP1Q9P2E9 1410 aaKnown RBP8.06□□□□□ -1.12
R3HDM1-203ENST00000409606 CFAP74Q9C0B2 1584 aa8.05□□□□□ -1.12
R3HDM1-203ENST00000409606 TTC37Q6PGP7 1564 aa8.05□□□□□ -1.12
R3HDM1-203ENST00000409606 DNMT1P26358 1616 aaKnown RBP8.04□□□□□ -1.12
R3HDM1-203ENST00000409606 DIP2BQ9P265 1576 aa8.04□□□□□ -1.12
R3HDM1-203ENST00000409606 PRG4Q92954 1404 aaPredicted RBP8.04□□□□□ -1.12
R3HDM1-203ENST00000409606 ATP10BO94823 1461 aa8.03□□□□□ -1.12
R3HDM1-203ENST00000409606 PLXNC1O60486 1568 aa8.03□□□□□ -1.12
R3HDM1-203ENST00000409606 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.03□□□□□ -1.12
R3HDM1-203ENST00000409606 FHOD3Q2V2M9 1422 aa8.03□□□□□ -1.12
R3HDM1-203ENST00000409606 CARMIL2Q6F5E8 1435 aa8.02□□□□□ -1.12
R3HDM1-203ENST00000409606 RICTORQ6R327 1708 aa8.02□□□□□ -1.12
R3HDM1-203ENST00000409606 DEPDC5O75140 1603 aa8.02□□□□□ -1.13
R3HDM1-203ENST00000409606 UACAQ9BZF9 1416 aa8.02□□□□□ -1.13
R3HDM1-203ENST00000409606 PLB1Q6P1J6 1458 aa8.01□□□□□ -1.13
R3HDM1-203ENST00000409606 INO80Q9ULG1 1556 aaPredicted RBP8.01□□□□□ -1.13
R3HDM1-203ENST00000409606 KDM5CP41229 1560 aa8.01□□□□□ -1.13
R3HDM1-203ENST00000409606 REREQ9P2R6 1566 aa8.01□□□□□ -1.13
R3HDM1-203ENST00000409606 FRMPD1Q5SYB0 1578 aa8□□□□□ -1.13
R3HDM1-203ENST00000409606 SAMD9LQ8IVG5 1584 aa8□□□□□ -1.13
R3HDM1-203ENST00000409606 TRHP20396 242 aaPredicted RBP8□□□□□ -1.13
R3HDM1-203ENST00000409606 PTPN23Q9H3S7 1636 aa7.99□□□□□ -1.13
R3HDM1-203ENST00000409606 CDK13Q14004 1512 aaKnown RBP7.99□□□□□ -1.13
R3HDM1-203ENST00000409606 WDR7Q9Y4E6 1490 aa7.99□□□□□ -1.13
R3HDM1-203ENST00000409606 ZMYM4Q5VZL5 1548 aa7.99□□□□□ -1.13
R3HDM1-203ENST00000409606 AKNAQ7Z591 1439 aa7.99□□□□□ -1.13
R3HDM1-203ENST00000409606 SHANK2Q9UPX8 1470 aa7.99□□□□□ -1.13
R3HDM1-203ENST00000409606 EIF2AK4Q9P2K8 1649 aaKnown RBP7.98□□□□□ -1.13
R3HDM1-203ENST00000409606 ABCC1P33527 1531 aa7.98□□□□□ -1.13
R3HDM1-203ENST00000409606 ADGRL2O95490 1459 aa7.97□□□□□ -1.13
R3HDM1-203ENST00000409606 MIA2Q96PC5 1412 aa7.97□□□□□ -1.13
R3HDM1-203ENST00000409606 LOC105371045A0A1W2PR82 267 aa7.96□□□□□ -1.13
R3HDM1-203ENST00000409606 TROQ12816 1431 aaPredicted RBP7.96□□□□□ -1.13
R3HDM1-203ENST00000409606 KDM5DQ9BY66 1539 aa7.96□□□□□ -1.14
R3HDM1-203ENST00000409606 MAGI2Q86UL8 1455 aa7.96□□□□□ -1.14
R3HDM1-203ENST00000409606 UNC13BO14795 1591 aa7.95□□□□□ -1.14
R3HDM1-203ENST00000409606 RNF17Q9BXT8 1623 aaKnown RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms