RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 PRG4Q92954 1404 aaPredicted RBP33.65■■■□□ 2.98
TSPAN4-209ENST00000409543 CARMIL1Q5VZK9 1371 aa33.64■■■□□ 2.98
TSPAN4-209ENST00000409543 TRHP20396 242 aaPredicted RBP33.63■■■□□ 2.97
TSPAN4-209ENST00000409543 KIAA0586Q9BVV6 1533 aa33.59■■■□□ 2.97
TSPAN4-209ENST00000409543 RAPGEF2Q9Y4G8 1499 aa33.38■■■□□ 2.93
TSPAN4-209ENST00000409543 IQGAP2Q13576 1575 aa33.31■■■□□ 2.92
TSPAN4-209ENST00000409543 CARMIL2Q6F5E8 1435 aa33.25■■■□□ 2.91
TSPAN4-209ENST00000409543 PTPRGP23470 1445 aa33.2■■■□□ 2.91
TSPAN4-209ENST00000409543 NPM1P06748 294 aaKnown RBP eCLIP33.19■■■□□ 2.9
TSPAN4-209ENST00000409543 ADCY10Q96PN6 1610 aa33.18■■■□□ 2.9
TSPAN4-209ENST00000409543 TNIKQ9UKE5 1360 aa33.18■■■□□ 2.9
TSPAN4-209ENST00000409543 PRXQ9BXM0 1461 aa33.16■■■□□ 2.9
TSPAN4-209ENST00000409543 DISP1Q96F81 1524 aa33.13■■■□□ 2.89
TSPAN4-209ENST00000409543 UGGT2Q9NYU1 1516 aa33.13■■■□□ 2.89
TSPAN4-209ENST00000409543 MAPKBP1O60336 1514 aa33.08■■■□□ 2.89
TSPAN4-209ENST00000409543 TTBK1Q5TCY1 1321 aaPredicted RBP33.07■■■□□ 2.88
TSPAN4-209ENST00000409543 CTTNBP2Q8WZ74 1663 aa33.06■■■□□ 2.88
TSPAN4-209ENST00000409543 CSRNP3Q8WYN3 585 aa33.04■■■□□ 2.88
TSPAN4-209ENST00000409543 KIF13AQ9H1H9 1805 aa33.02■■■□□ 2.88
TSPAN4-209ENST00000409543 ABCC10Q5T3U5 1492 aa32.99■■■□□ 2.87
TSPAN4-209ENST00000409543 KIAA0556O60303 1618 aa32.99■■■□□ 2.87
TSPAN4-209ENST00000409543 EEA1Q15075 1411 aa32.98■■■□□ 2.87
TSPAN4-209ENST00000409543 UHRF1BP1LA0JNW5 1464 aa32.96■■■□□ 2.87
TSPAN4-209ENST00000409543 UACAQ9BZF9 1416 aa32.95■■■□□ 2.87
TSPAN4-209ENST00000409543 FAM69CQ0P6D2 419 aa32.95■■■□□ 2.87
TSPAN4-209ENST00000409543 ABCC2Q92887 1545 aa32.95■■■□□ 2.87
TSPAN4-209ENST00000409543 GOLGA3Q08378 1498 aa32.92■■■□□ 2.86
TSPAN4-209ENST00000409543 DIP2BQ9P265 1576 aa32.9■■■□□ 2.86
TSPAN4-209ENST00000409543 CHIC1Q5VXU3 224 aa32.81■■■□□ 2.84
TSPAN4-209ENST00000409543 KDM5BQ9UGL1 1544 aa32.8■■■□□ 2.84
TSPAN4-209ENST00000409543 PLB1Q6P1J6 1458 aa32.79■■■□□ 2.84
TSPAN4-209ENST00000409543 ASXL2Q76L83 1435 aa32.78■■■□□ 2.84
TSPAN4-209ENST00000409543 FAM9AQ8IZU1 332 aaPredicted RBP32.78■■■□□ 2.84
TSPAN4-209ENST00000409543 ZCCHC11Q5TAX3 1644 aaKnown RBP32.69■■■□□ 2.82
TSPAN4-209ENST00000409543 ABCA8O94911 1581 aa32.68■■■□□ 2.82
TSPAN4-209ENST00000409543 GLI2P10070 1586 aa32.66■■■□□ 2.82
TSPAN4-209ENST00000409543 KIF21BO75037 1637 aa32.65■■■□□ 2.82
TSPAN4-209ENST00000409543 P3H3Q8IVL6 736 aa32.64■■■□□ 2.82
TSPAN4-209ENST00000409543 SAMD9Q5K651 1589 aa32.63■■■□□ 2.81
TSPAN4-209ENST00000409543 TSPOAP1O95153 1857 aa32.62■■■□□ 2.81
TSPAN4-209ENST00000409543 EPRSP07814 1512 aaKnown RBP32.59■■■□□ 2.81
TSPAN4-209ENST00000409543 WDR7Q9Y4E6 1490 aa32.54■■■□□ 2.8
TSPAN4-209ENST00000409543 KDM6BO15054 1643 aa32.49■■■□□ 2.79
TSPAN4-209ENST00000409543 RANGAP1P46060 587 aaPredicted RBP32.49■■■□□ 2.79
TSPAN4-209ENST00000409543 MAP3K4Q9Y6R4 1608 aa32.48■■■□□ 2.79
TSPAN4-209ENST00000409543 PPRC1Q5VV67 1664 aaKnown RBP32.47■■■□□ 2.79
TSPAN4-209ENST00000409543 ATP10BO94823 1461 aa32.42■■■□□ 2.78
TSPAN4-209ENST00000409543 FHOD3Q2V2M9 1422 aa32.41■■■□□ 2.78
TSPAN4-209ENST00000409543 EFCAB5A4FU69 1503 aa32.41■■■□□ 2.78
TSPAN4-209ENST00000409543 RAPGEF6Q8TEU7 1601 aa32.4■■■□□ 2.78
TSPAN4-209ENST00000409543 UBTFP17480 764 aaKnown RBP32.4■■■□□ 2.78
TSPAN4-209ENST00000409543 KCNH8Q96L42 1107 aa32.39■■■□□ 2.78
TSPAN4-209ENST00000409543 ARID3CA6NKF2 412 aa32.38■■■□□ 2.77
TSPAN4-209ENST00000409543 TEX14Q8IWB6 1497 aa32.37■■■□□ 2.77
TSPAN4-209ENST00000409543 EHMT2Q96KQ7 1210 aa32.36■■■□□ 2.77
TSPAN4-209ENST00000409543 CD109Q6YHK3 1445 aa32.31■■■□□ 2.76
TSPAN4-209ENST00000409543 CFAP43Q8NDM7 1665 aa32.31■■■□□ 2.76
TSPAN4-209ENST00000409543 NUP153P49790 1475 aaKnown RBP32.29■■■□□ 2.76
TSPAN4-209ENST00000409543 AEBP2Q6ZN18 517 aaPredicted RBP32.28■■■□□ 2.76
TSPAN4-209ENST00000409543 MAGI3Q5TCQ9 1506 aa32.27■■■□□ 2.76
TSPAN4-209ENST00000409543 COL17A1Q9UMD9 1497 aaPredicted RBP32.24■■■□□ 2.75
TSPAN4-209ENST00000409543 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.24■■■□□ 2.75
TSPAN4-209ENST00000409543 HNRNPUL2Q1KMD3 747 aaKnown RBP32.24■■■□□ 2.75
TSPAN4-209ENST00000409543 ARHGAP35Q9NRY4 1499 aa32.17■■■□□ 2.74
TSPAN4-209ENST00000409543 ABCA9Q8IUA7 1624 aa32.15■■■□□ 2.74
TSPAN4-209ENST00000409543 FMN1Q68DA7 1419 aa32.12■■■□□ 2.73
TSPAN4-209ENST00000409543 PLEKHD1A6NEE1 506 aa32.12■■■□□ 2.73
TSPAN4-209ENST00000409543 PHLDB1Q86UU1 1377 aa32.02■■■□□ 2.72
TSPAN4-209ENST00000409543 ARAP3Q8WWN8 1544 aa32.01■■■□□ 2.72
TSPAN4-209ENST00000409543 CDK13Q14004 1512 aaKnown RBP32■■■□□ 2.71
TSPAN4-209ENST00000409543 HECW1Q76N89 1606 aa32■■■□□ 2.71
TSPAN4-209ENST00000409543 KDM4FA0A1W2PPD8 638 aa31.99■■■□□ 2.71
TSPAN4-209ENST00000409543 ATP1B4Q9UN42 357 aaPredicted RBP31.99■■■□□ 2.71
TSPAN4-209ENST00000409543 NEO1Q92859 1461 aa31.96■■■□□ 2.71
TSPAN4-209ENST00000409543 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.92■■■□□ 2.7
TSPAN4-209ENST00000409543 CDK11AQ9UQ88 783 aaPredicted RBP31.89■■■□□ 2.7
TSPAN4-209ENST00000409543 TTC37Q6PGP7 1564 aa31.85■■■□□ 2.69
TSPAN4-209ENST00000409543 CLIP1P30622 1438 aa31.83■■■□□ 2.69
TSPAN4-209ENST00000409543 ADGRL1O94910 1474 aa31.83■■■□□ 2.69
TSPAN4-209ENST00000409543 CASKIN1Q8WXD9 1431 aa31.83■■■□□ 2.69
TSPAN4-209ENST00000409543 RAPGEF3O95398 923 aa31.81■■■□□ 2.68
TSPAN4-209ENST00000409543 FANCAO15360 1455 aa31.8■■■□□ 2.68
TSPAN4-209ENST00000409543 LRRIQ1Q96JM4 1722 aa31.79■■■□□ 2.68
TSPAN4-209ENST00000409543 CFAP74Q9C0B2 1584 aa31.79■■■□□ 2.68
TSPAN4-209ENST00000409543 AKNAQ7Z591 1439 aa31.78■■■□□ 2.68
TSPAN4-209ENST00000409543 PCF11O94913 1555 aaKnown RBP31.77■■■□□ 2.68
TSPAN4-209ENST00000409543 TROQ12816 1431 aaPredicted RBP31.77■■■□□ 2.68
TSPAN4-209ENST00000409543 PLCH2O75038 1416 aa31.75■■■□□ 2.67
TSPAN4-209ENST00000409543 CCDC18Q5T9S5 1454 aa31.74■■■□□ 2.67
TSPAN4-209ENST00000409543 FRMPD1Q5SYB0 1578 aa31.73■■■□□ 2.67
TSPAN4-209ENST00000409543 DENND4BO75064 1496 aaPredicted RBP31.72■■■□□ 2.67
TSPAN4-209ENST00000409543 FYCO1Q9BQS8 1478 aa31.72■■■□□ 2.67
TSPAN4-209ENST00000409543 KIF14Q15058 1648 aa31.71■■■□□ 2.67
TSPAN4-209ENST00000409543 MYO5CQ9NQX4 1742 aa31.66■■■□□ 2.66
TSPAN4-209ENST00000409543 RICTORQ6R327 1708 aa31.66■■■□□ 2.66
TSPAN4-209ENST00000409543 EFCAB2Q5VUJ9 269 aa31.64■■■□□ 2.66
TSPAN4-209ENST00000409543 SCAPERQ9BY12 1400 aa31.59■■■□□ 2.65
TSPAN4-209ENST00000409543 CEP162Q5TB80 1403 aa31.58■■■□□ 2.65
TSPAN4-209ENST00000409543 ZMYM4Q5VZL5 1548 aa31.56■■■□□ 2.64
TSPAN4-209ENST00000409543 POGZQ7Z3K3 1410 aa31.54■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms