RNA–Protein interactions for RNA: ENST00000409387.5

SLC3A1-205, Transcript of solute carrier family 3 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC3A1, Length 2,334 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1-205ENST00000409387 PAXIP1Q6ZW49 1069 aaPredicted RBP16.61■□□□□ 0.25
SLC3A1-205ENST00000409387 SMARCA2P51531 1590 aa16.59■□□□□ 0.25
SLC3A1-205ENST00000409387 TRIM41Q8WV44 630 aa16.58■□□□□ 0.24
SLC3A1-205ENST00000409387 CDK11BP21127 795 aaKnown RBP16.55■□□□□ 0.24
SLC3A1-205ENST00000409387 NAP1L5Q96NT1 182 aaPredicted RBP16.55■□□□□ 0.24
SLC3A1-205ENST00000409387 CCDC88BA6NC98 1476 aa16.54■□□□□ 0.24
SLC3A1-205ENST00000409387 PEG3Q9GZU2 1588 aa16.51■□□□□ 0.23
SLC3A1-205ENST00000409387 TRIM26Q12899 539 aaPredicted RBP16.51■□□□□ 0.23
SLC3A1-205ENST00000409387 VSIG10Q8N0Z9 540 aa16.5■□□□□ 0.23
SLC3A1-205ENST00000409387 HSP90B1P14625 803 aaKnown RBP16.48■□□□□ 0.23
SLC3A1-205ENST00000409387 BCCIPQ9P287 314 aaKnown RBP eCLIP16.46■□□□□ 0.23
SLC3A1-205ENST00000409387 ABCC8Q09428 1581 aa16.44■□□□□ 0.22
SLC3A1-205ENST00000409387 ATAD2BQ9ULI0 1458 aa16.39■□□□□ 0.21
SLC3A1-205ENST00000409387 TMEM132AQ24JP5 1023 aa16.33■□□□□ 0.2
SLC3A1-205ENST00000409387 NAP1L2Q9ULW6 460 aaPredicted RBP16.33■□□□□ 0.2
SLC3A1-205ENST00000409387 BAZ1BQ9UIG0 1483 aaKnown RBP16.32■□□□□ 0.2
SLC3A1-205ENST00000409387 SUPT16HQ9Y5B9 1047 aaKnown RBP16.29■□□□□ 0.2
SLC3A1-205ENST00000409387 IL27Q8NEV9 243 aa16.26■□□□□ 0.19
SLC3A1-205ENST00000409387 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.24■□□□□ 0.19
SLC3A1-205ENST00000409387 DIEXFQ68CQ4 756 aaKnown RBP16.22■□□□□ 0.19
SLC3A1-205ENST00000409387 IRX6P78412 446 aaPredicted RBP16.21■□□□□ 0.19
SLC3A1-205ENST00000409387 MSH5O43196 834 aa16.2■□□□□ 0.18
SLC3A1-205ENST00000409387 IPO4Q8TEX9 1081 aaKnown RBP16.19■□□□□ 0.18
SLC3A1-205ENST00000409387 RBM19Q9Y4C8 960 aaKnown RBP16.19■□□□□ 0.18
SLC3A1-205ENST00000409387 SYNJ1O43426 1573 aa16.17■□□□□ 0.18
SLC3A1-205ENST00000409387 SOGA1O94964 1423 aa16.16■□□□□ 0.18
SLC3A1-205ENST00000409387 HMGXB3Q12766 1538 aa16.15■□□□□ 0.18
SLC3A1-205ENST00000409387 WRNQ14191 1432 aaPredicted RBP eCLIP16.14■□□□□ 0.17
SLC3A1-205ENST00000409387 RUSC2Q8N2Y8 1516 aa16.13■□□□□ 0.17
SLC3A1-205ENST00000409387 ZFP91Q96JP5 570 aaPredicted RBP16.13■□□□□ 0.17
SLC3A1-205ENST00000409387 POLR3GLQ9BT43 218 aa16.13■□□□□ 0.17
SLC3A1-205ENST00000409387 TEX2Q8IWB9 1127 aa16.12■□□□□ 0.17
SLC3A1-205ENST00000409387 NCAPD3P42695 1498 aa16.12■□□□□ 0.17
SLC3A1-205ENST00000409387 FANCIQ9NVI1 1328 aa16.12■□□□□ 0.17
SLC3A1-205ENST00000409387 CHMP4BQ9H444 224 aaKnown RBP16.1■□□□□ 0.17
SLC3A1-205ENST00000409387 HMGB1P09429 215 aaKnown RBP16.08■□□□□ 0.17
SLC3A1-205ENST00000409387 CHRM1P11229 460 aaPredicted RBP16.08■□□□□ 0.17
SLC3A1-205ENST00000409387 UBTFP17480 764 aaKnown RBP16.08■□□□□ 0.17
SLC3A1-205ENST00000409387 BBXQ8WY36 941 aaPredicted RBP16.07■□□□□ 0.16
SLC3A1-205ENST00000409387 IGSF3O75054 1194 aa16.06■□□□□ 0.16
SLC3A1-205ENST00000409387 PLCB2Q00722 1185 aa16.05■□□□□ 0.16
SLC3A1-205ENST00000409387 CCDC9Q9Y3X0 531 aaKnown RBP16.05■□□□□ 0.16
SLC3A1-205ENST00000409387 NCLP19338 710 aaKnown RBP16.01■□□□□ 0.15
SLC3A1-205ENST00000409387 FTSJ3Q8IY81 847 aaKnown RBP16■□□□□ 0.15
SLC3A1-205ENST00000409387 SECISBP2LQ93073 1101 aaKnown RBP16■□□□□ 0.15
SLC3A1-205ENST00000409387 EEA1Q15075 1411 aa16■□□□□ 0.15
SLC3A1-205ENST00000409387 TOP2BQ02880 1626 aa15.98■□□□□ 0.15
SLC3A1-205ENST00000409387 GTF2E1P29083 439 aaPredicted RBP15.98■□□□□ 0.15
SLC3A1-205ENST00000409387 PPP6R1Q9UPN7 881 aa15.98■□□□□ 0.15
SLC3A1-205ENST00000409387 BIVM-ERCC5R4GMW8 1640 aa15.97■□□□□ 0.15
SLC3A1-205ENST00000409387 C11orf95C9JLR9 678 aaPredicted RBP15.96■□□□□ 0.15
SLC3A1-205ENST00000409387 TICAM2Q86XR7 235 aa15.95■□□□□ 0.14
SLC3A1-205ENST00000409387 CNPY4Q8N129 248 aa15.95■□□□□ 0.14
SLC3A1-205ENST00000409387 CC2D2AQ9P2K1 1620 aa15.95■□□□□ 0.14
SLC3A1-205ENST00000409387 YTHDC1Q96MU7 727 aaKnown RBP15.94■□□□□ 0.14
SLC3A1-205ENST00000409387 CEP162Q5TB80 1403 aa15.93■□□□□ 0.14
SLC3A1-205ENST00000409387 RRP9O43818 475 aaKnown RBP15.93■□□□□ 0.14
SLC3A1-205ENST00000409387 CANXP27824 592 aaKnown RBP15.93■□□□□ 0.14
SLC3A1-205ENST00000409387 PRDM2Q13029 1718 aa15.93■□□□□ 0.14
SLC3A1-205ENST00000409387 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.93■□□□□ 0.14
SLC3A1-205ENST00000409387 CFTRP13569 1480 aa15.91■□□□□ 0.14
SLC3A1-205ENST00000409387 RNF216Q9NWF9 866 aaPredicted RBP15.9■□□□□ 0.14
SLC3A1-205ENST00000409387 TNIKQ9UKE5 1360 aa15.9■□□□□ 0.14
SLC3A1-205ENST00000409387 KIF21BO75037 1637 aa15.89■□□□□ 0.13
SLC3A1-205ENST00000409387 GOLGA3Q08378 1498 aa15.89■□□□□ 0.13
SLC3A1-205ENST00000409387 CUX1P39880 1505 aa15.89■□□□□ 0.13
SLC3A1-205ENST00000409387 CFAP44Q96MT7 982 aa15.88■□□□□ 0.13
SLC3A1-205ENST00000409387 BRPF3Q9ULD4 1205 aa15.88■□□□□ 0.13
SLC3A1-205ENST00000409387 CNGB1Q14028 1251 aaPredicted RBP15.88■□□□□ 0.13
SLC3A1-205ENST00000409387 CCER1Q8TC90 406 aaPredicted RBP15.88■□□□□ 0.13
SLC3A1-205ENST00000409387 STAC3Q96MF2 364 aa15.87■□□□□ 0.13
SLC3A1-205ENST00000409387 HSP90AA2PQ14568 343 aaPredicted RBP15.85■□□□□ 0.13
SLC3A1-205ENST00000409387 PUS7Q96PZ0 661 aaKnown RBP15.84■□□□□ 0.13
SLC3A1-205ENST00000409387 CEP164Q9UPV0 1460 aa15.84■□□□□ 0.13
SLC3A1-205ENST00000409387 PRDM10Q9NQV6 1147 aa15.83■□□□□ 0.12
SLC3A1-205ENST00000409387 PRDM4Q9UKN5 801 aa15.82■□□□□ 0.12
SLC3A1-205ENST00000409387 ARID4BQ4LE39 1312 aaPredicted RBP15.82■□□□□ 0.12
SLC3A1-205ENST00000409387 CLSTN1O94985 981 aa15.8■□□□□ 0.12
SLC3A1-205ENST00000409387 RAPGEF2Q9Y4G8 1499 aa15.8■□□□□ 0.12
SLC3A1-205ENST00000409387 CALD1Q05682 793 aaKnown RBP15.79■□□□□ 0.12
SLC3A1-205ENST00000409387 RTL5Q5HYW3 569 aaPredicted RBP15.79■□□□□ 0.12
SLC3A1-205ENST00000409387 ZNF592Q92610 1267 aa15.78■□□□□ 0.12
SLC3A1-205ENST00000409387 WWC1Q8IX03 1113 aa15.78■□□□□ 0.12
SLC3A1-205ENST00000409387 KCNG1Q9UIX4 513 aa15.76■□□□□ 0.11
SLC3A1-205ENST00000409387 CADPSQ9ULU8 1353 aa15.75■□□□□ 0.11
SLC3A1-205ENST00000409387 ARID3AQ99856 593 aa15.74■□□□□ 0.11
SLC3A1-205ENST00000409387 GRIPAP1Q4V328 841 aa15.71■□□□□ 0.1
SLC3A1-205ENST00000409387 PRXQ9BXM0 1461 aa15.69■□□□□ 0.1
SLC3A1-205ENST00000409387 TMED8Q6PL24 325 aaPredicted RBP15.68■□□□□ 0.1
SLC3A1-205ENST00000409387 CLIP1P30622 1438 aa15.68■□□□□ 0.1
SLC3A1-205ENST00000409387 ERICH3Q5RHP9 1530 aa15.68■□□□□ 0.1
SLC3A1-205ENST00000409387 PLCD4Q9BRC7 762 aa15.66■□□□□ 0.1
SLC3A1-205ENST00000409387 NESP48681 1621 aa15.66■□□□□ 0.1
SLC3A1-205ENST00000409387 WASHC2CQ9Y4E1 1318 aa15.65■□□□□ 0.1
SLC3A1-205ENST00000409387 PPM1GO15355 546 aaPredicted RBP15.65■□□□□ 0.1
SLC3A1-205ENST00000409387 PTMAP06454 111 aaKnown RBP15.65■□□□□ 0.1
SLC3A1-205ENST00000409387 NBR1Q14596 966 aa15.65■□□□□ 0.1
SLC3A1-205ENST00000409387 FAM43AQ8N2R8 423 aa15.65■□□□□ 0.1
SLC3A1-205ENST00000409387 KIF27Q86VH2 1401 aa15.64■□□□□ 0.09
SLC3A1-205ENST00000409387 CENPJQ9HC77 1338 aaPredicted RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms