RNA–Protein interactions for RNA: ENST00000409001.5

SSFA2-202, Transcript of Sperm-specific antigen 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSFA2, Length 4,987 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSFA2-202ENST00000409001 SENP3-EIF4A1A0A087X0R7 540 aa21.19■□□□□ 0.98
SSFA2-202ENST00000409001 SOGA1O94964 1423 aa21.18■□□□□ 0.98
SSFA2-202ENST00000409001 SUPT16HQ9Y5B9 1047 aaKnown RBP21.16■□□□□ 0.98
SSFA2-202ENST00000409001 KIF27Q86VH2 1401 aa21.13■□□□□ 0.97
SSFA2-202ENST00000409001 WDR43Q15061 677 aaKnown RBP eCLIP21.11■□□□□ 0.97
SSFA2-202ENST00000409001 NACADO15069 1562 aa21.11■□□□□ 0.97
SSFA2-202ENST00000409001 EIF5BO60841 1220 aaKnown RBP21.1■□□□□ 0.97
SSFA2-202ENST00000409001 UPF2Q9HAU5 1272 aaKnown RBP21.09■□□□□ 0.97
SSFA2-202ENST00000409001 BAZ1BQ9UIG0 1483 aaKnown RBP21.09■□□□□ 0.97
SSFA2-202ENST00000409001 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.07■□□□□ 0.96
SSFA2-202ENST00000409001 HSP90AA1P07900 732 aaKnown RBP21.05■□□□□ 0.96
SSFA2-202ENST00000409001 CHMP7Q8WUX9 453 aaPredicted RBP21.05■□□□□ 0.96
SSFA2-202ENST00000409001 BAZ1AQ9NRL2 1556 aaPredicted RBP21.05■□□□□ 0.96
SSFA2-202ENST00000409001 CCNB3Q8WWL7 1395 aa21.03■□□□□ 0.96
SSFA2-202ENST00000409001 ANP32EQ9BTT0 268 aa21.03■□□□□ 0.96
SSFA2-202ENST00000409001 RGL3Q3MIN7 710 aa21.02■□□□□ 0.95
SSFA2-202ENST00000409001 STAG3Q9UJ98 1225 aa20.98■□□□□ 0.95
SSFA2-202ENST00000409001 MROH2BQ7Z745 1585 aa20.96■□□□□ 0.95
SSFA2-202ENST00000409001 KANK4Q5T7N3 995 aaPredicted RBP20.95■□□□□ 0.94
SSFA2-202ENST00000409001 ARXQ96QS3 562 aa20.95■□□□□ 0.94
SSFA2-202ENST00000409001 CCDC88BA6NC98 1476 aa20.94■□□□□ 0.94
SSFA2-202ENST00000409001 CFDP1Q9UEE9 299 aaPredicted RBP20.94■□□□□ 0.94
SSFA2-202ENST00000409001 PLEKHD1A6NEE1 506 aa20.93■□□□□ 0.94
SSFA2-202ENST00000409001 VPS8Q8N3P4 1428 aa20.92■□□□□ 0.94
SSFA2-202ENST00000409001 ABCC8Q09428 1581 aa20.92■□□□□ 0.94
SSFA2-202ENST00000409001 CARD11Q9BXL7 1154 aa20.91■□□□□ 0.94
SSFA2-202ENST00000409001 ANP32BQ92688 251 aaKnown RBP20.89■□□□□ 0.94
SSFA2-202ENST00000409001 NPM1P06748 294 aaKnown RBP eCLIP20.89■□□□□ 0.93
SSFA2-202ENST00000409001 PPP4R2Q9NY27 417 aa20.89■□□□□ 0.93
SSFA2-202ENST00000409001 KCNH8Q96L42 1107 aa20.88■□□□□ 0.93
SSFA2-202ENST00000409001 ESF1Q9H501 851 aaKnown RBP20.88■□□□□ 0.93
SSFA2-202ENST00000409001 B4GALNT3Q6L9W6 998 aa20.86■□□□□ 0.93
SSFA2-202ENST00000409001 SENP3Q9H4L4 574 aaPredicted RBP20.84■□□□□ 0.93
SSFA2-202ENST00000409001 CARMIL1Q5VZK9 1371 aa20.83■□□□□ 0.93
SSFA2-202ENST00000409001 TIMELESSQ9UNS1 1208 aa20.83■□□□□ 0.92
SSFA2-202ENST00000409001 FHAD1B1AJZ9 1412 aa20.81■□□□□ 0.92
SSFA2-202ENST00000409001 SETD5Q9C0A6 1442 aa20.79■□□□□ 0.92
SSFA2-202ENST00000409001 CUX2O14529 1486 aa20.79■□□□□ 0.92
SSFA2-202ENST00000409001 KNSTRNQ9Y448 316 aa20.78■□□□□ 0.92
SSFA2-202ENST00000409001 CCER2I3L3R5 266 aa20.78■□□□□ 0.92
SSFA2-202ENST00000409001 PLPPR3Q6T4P5 718 aa20.77■□□□□ 0.92
SSFA2-202ENST00000409001 DDRGK1Q96HY6 314 aa20.76■□□□□ 0.91
SSFA2-202ENST00000409001 RAB3GAP2Q9H2M9 1393 aa20.73■□□□□ 0.91
SSFA2-202ENST00000409001 RBM19Q9Y4C8 960 aaKnown RBP20.73■□□□□ 0.91
SSFA2-202ENST00000409001 HSPA5P11021 654 aaKnown RBP20.72■□□□□ 0.91
SSFA2-202ENST00000409001 NEUROD2Q15784 382 aa20.7■□□□□ 0.9
SSFA2-202ENST00000409001 LAS1LQ9Y4W2 734 aaKnown RBP20.69■□□□□ 0.9
SSFA2-202ENST00000409001 FOXD1Q16676 465 aa20.68■□□□□ 0.9
SSFA2-202ENST00000409001 CC2D1BQ5T0F9 858 aaKnown RBP20.68■□□□□ 0.9
SSFA2-202ENST00000409001 BECN1Q14457 450 aa20.68■□□□□ 0.9
SSFA2-202ENST00000409001 CDCA8Q53HL2 280 aa20.68■□□□□ 0.9
SSFA2-202ENST00000409001 NOP58Q9Y2X3 529 aaKnown RBP20.68■□□□□ 0.9
SSFA2-202ENST00000409001 RGS3P49796 1198 aa20.67■□□□□ 0.9
SSFA2-202ENST00000409001 DCAF11Q8TEB1 546 aa20.66■□□□□ 0.9
SSFA2-202ENST00000409001 MYH16Q9H6N6 1097 aa20.64■□□□□ 0.89
SSFA2-202ENST00000409001 PPP1R15AO75807 674 aaPredicted RBP20.63■□□□□ 0.89
SSFA2-202ENST00000409001 WIZO95785 1651 aa20.62■□□□□ 0.89
SSFA2-202ENST00000409001 PPM1GO15355 546 aaPredicted RBP20.62■□□□□ 0.89
SSFA2-202ENST00000409001 ARHGAP35Q9NRY4 1499 aa20.61■□□□□ 0.89
SSFA2-202ENST00000409001 CFAP53Q96M91 514 aa20.61■□□□□ 0.89
SSFA2-202ENST00000409001 TSHZ2Q9NRE2 1034 aa20.6■□□□□ 0.89
SSFA2-202ENST00000409001 TNNT2P45379 298 aaPredicted RBP20.58■□□□□ 0.88
SSFA2-202ENST00000409001 FRAT1Q92837 279 aaPredicted RBP20.58■□□□□ 0.88
SSFA2-202ENST00000409001 FTSJ3Q8IY81 847 aaKnown RBP20.55■□□□□ 0.88
SSFA2-202ENST00000409001 RUSC2Q8N2Y8 1516 aa20.54■□□□□ 0.88
SSFA2-202ENST00000409001 PKD2Q13563 968 aa20.54■□□□□ 0.88
SSFA2-202ENST00000409001 EIF4G1Q04637 1599 aaKnown RBP20.54■□□□□ 0.88
SSFA2-202ENST00000409001 RAPGEF2Q9Y4G8 1499 aa20.53■□□□□ 0.88
SSFA2-202ENST00000409001 MPHOSPH9Q99550 1183 aa20.53■□□□□ 0.88
SSFA2-202ENST00000409001 RTN4Q9NQC3 1192 aaKnown RBP20.53■□□□□ 0.88
SSFA2-202ENST00000409001 TMF1P82094 1093 aa20.51■□□□□ 0.87
SSFA2-202ENST00000409001 GLIPR1L2Q4G1C9 344 aa20.51■□□□□ 0.87
SSFA2-202ENST00000409001 DHX57Q6P158 1386 aaKnown RBP20.51■□□□□ 0.87
SSFA2-202ENST00000409001 TOP2AP11388 1531 aaKnown RBP20.49■□□□□ 0.87
SSFA2-202ENST00000409001 L3MBTL2Q969R5 705 aa20.47■□□□□ 0.87
SSFA2-202ENST00000409001 TRIM44Q96DX7 344 aaPredicted RBP20.46■□□□□ 0.87
SSFA2-202ENST00000409001 TDRD9Q8NDG6 1382 aaKnown RBP20.45■□□□□ 0.86
SSFA2-202ENST00000409001 MAPK8IP3Q9UPT6 1336 aa20.44■□□□□ 0.86
SSFA2-202ENST00000409001 PLEKHG5O94827 1062 aa20.44■□□□□ 0.86
SSFA2-202ENST00000409001 DEKP35659 375 aaKnown RBP20.44■□□□□ 0.86
SSFA2-202ENST00000409001 ERICH6BQ5W0A0 696 aa20.44■□□□□ 0.86
SSFA2-202ENST00000409001 GOLGA6L22H0YM25 854 aa20.43■□□□□ 0.86
SSFA2-202ENST00000409001 NUDCQ9Y266 331 aa20.42■□□□□ 0.86
SSFA2-202ENST00000409001 NCLP19338 710 aaKnown RBP20.41■□□□□ 0.86
SSFA2-202ENST00000409001 FMN1Q68DA7 1419 aa20.41■□□□□ 0.86
SSFA2-202ENST00000409001 U2SURPO15042 1029 aaKnown RBP20.41■□□□□ 0.86
SSFA2-202ENST00000409001 FHOD3Q2V2M9 1422 aa20.4■□□□□ 0.86
SSFA2-202ENST00000409001 RCAN3Q9UKA8 241 aa20.39■□□□□ 0.86
SSFA2-202ENST00000409001 SMARCA2P51531 1590 aa20.39■□□□□ 0.85
SSFA2-202ENST00000409001 C14orf37Q86TY3 774 aa20.38■□□□□ 0.85
SSFA2-202ENST00000409001 ZBTB7CA1YPR0 619 aa20.38■□□□□ 0.85
SSFA2-202ENST00000409001 POGKQ9P215 609 aa20.37■□□□□ 0.85
SSFA2-202ENST00000409001 KTN1Q86UP2 1357 aaKnown RBP20.36■□□□□ 0.85
SSFA2-202ENST00000409001 NUP155O75694 1391 aa20.35■□□□□ 0.85
SSFA2-202ENST00000409001 RALBP1Q15311 655 aa20.31■□□□□ 0.84
SSFA2-202ENST00000409001 MORC1Q86VD1 984 aa20.3■□□□□ 0.84
SSFA2-202ENST00000409001 ROCK2O75116 1388 aaKnown RBP20.3■□□□□ 0.84
SSFA2-202ENST00000409001 ERCC6Q03468 1493 aa20.29■□□□□ 0.84
SSFA2-202ENST00000409001 TPRNQ4KMQ1 711 aa20.29■□□□□ 0.84
SSFA2-202ENST00000409001 SAFB2Q14151 953 aaKnown RBP eCLIP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms