RNA–Protein interactions for RNA: ENST00000408999.3

RGPD4-201, Transcript of RANBP2-like and GRIP domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD4, Length 5,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4-201ENST00000408999 RUSC2Q8N2Y8 1516 aa5.46□□□□□ -1.54
RGPD4-201ENST00000408999 TRIOO75962 3097 aa5.45□□□□□ -1.54
RGPD4-201ENST00000408999 IL27Q8NEV9 243 aa5.45□□□□□ -1.54
RGPD4-201ENST00000408999 PAK3O75914 559 aaPredicted RBP5.44□□□□□ -1.54
RGPD4-201ENST00000408999 TRIM52Q96A61 297 aa5.44□□□□□ -1.54
RGPD4-201ENST00000408999 P3H3Q8IVL6 736 aa5.43□□□□□ -1.54
RGPD4-201ENST00000408999 ARID3CA6NKF2 412 aa5.42□□□□□ -1.54
RGPD4-201ENST00000408999 CNGB1Q14028 1251 aaPredicted RBP5.42□□□□□ -1.54
RGPD4-201ENST00000408999 SMG1Q96Q15 3661 aaKnown RBP5.42□□□□□ -1.54
RGPD4-201ENST00000408999 FREM2Q5SZK8 3169 aa5.41□□□□□ -1.54
RGPD4-201ENST00000408999 DENND4BO75064 1496 aaPredicted RBP5.41□□□□□ -1.54
RGPD4-201ENST00000408999 RSF1Q96T23 1441 aaPredicted RBP5.4□□□□□ -1.54
RGPD4-201ENST00000408999 ANP32EQ9BTT0 268 aa5.4□□□□□ -1.54
RGPD4-201ENST00000408999 SLC4A1APQ9BWU0 796 aaKnown RBP5.39□□□□□ -1.55
RGPD4-201ENST00000408999 ASPMQ8IZT6 3477 aa5.39□□□□□ -1.55
RGPD4-201ENST00000408999 BAZ1BQ9UIG0 1483 aaKnown RBP5.39□□□□□ -1.55
RGPD4-201ENST00000408999 REV3LO60673 3130 aa5.39□□□□□ -1.55
RGPD4-201ENST00000408999 DCHS1Q96JQ0 3298 aa5.39□□□□□ -1.55
RGPD4-201ENST00000408999 DIEXFQ68CQ4 756 aaKnown RBP5.37□□□□□ -1.55
RGPD4-201ENST00000408999 FRYQ5TBA9 3013 aa5.37□□□□□ -1.55
RGPD4-201ENST00000408999 CCDC184Q52MB2 194 aa5.36□□□□□ -1.55
RGPD4-201ENST00000408999 ZNF326Q5BKZ1 582 aaKnown RBP5.36□□□□□ -1.55
RGPD4-201ENST00000408999 BAZ1AQ9NRL2 1556 aaPredicted RBP5.35□□□□□ -1.55
RGPD4-201ENST00000408999 ZNF777Q9ULD5 760 aaPredicted RBP5.35□□□□□ -1.55
RGPD4-201ENST00000408999 RELNP78509 3460 aa5.34□□□□□ -1.55
RGPD4-201ENST00000408999 MAPKBP1O60336 1514 aa5.34□□□□□ -1.55
RGPD4-201ENST00000408999 CELSR3Q9NYQ7 3312 aa5.34□□□□□ -1.56
RGPD4-201ENST00000408999 FRYLO94915 3013 aa5.33□□□□□ -1.56
RGPD4-201ENST00000408999 CDK11AQ9UQ88 783 aaPredicted RBP5.32□□□□□ -1.56
RGPD4-201ENST00000408999 C5orf42Q9H799 3197 aa5.32□□□□□ -1.56
RGPD4-201ENST00000408999 CECR2Q9BXF3 1484 aa5.32□□□□□ -1.56
RGPD4-201ENST00000408999 SPENQ96T58 3664 aaKnown RBP5.32□□□□□ -1.56
RGPD4-201ENST00000408999 RBM19Q9Y4C8 960 aaKnown RBP5.32□□□□□ -1.56
RGPD4-201ENST00000408999 GOLGA3Q08378 1498 aa5.32□□□□□ -1.56
RGPD4-201ENST00000408999 WRNQ14191 1432 aaPredicted RBP eCLIP5.32□□□□□ -1.56
RGPD4-201ENST00000408999 ABCC8Q09428 1581 aa5.31□□□□□ -1.56
RGPD4-201ENST00000408999 SKAP1Q86WV1 359 aa5.31□□□□□ -1.56
RGPD4-201ENST00000408999 DCAF11Q8TEB1 546 aa5.31□□□□□ -1.56
RGPD4-201ENST00000408999 CLIP1P30622 1438 aa5.3□□□□□ -1.56
RGPD4-201ENST00000408999 ANP32CO43423 234 aa5.29□□□□□ -1.56
RGPD4-201ENST00000408999 ZNF316A6NFI3 1004 aaPredicted RBP5.29□□□□□ -1.56
RGPD4-201ENST00000408999 CHMP7Q8WUX9 453 aaPredicted RBP5.29□□□□□ -1.56
RGPD4-201ENST00000408999 EEA1Q15075 1411 aa5.29□□□□□ -1.56
RGPD4-201ENST00000408999 MROH2BQ7Z745 1585 aa5.28□□□□□ -1.56
RGPD4-201ENST00000408999 ERCC6Q03468 1493 aa5.28□□□□□ -1.56
RGPD4-201ENST00000408999 CEP162Q5TB80 1403 aa5.28□□□□□ -1.56
RGPD4-201ENST00000408999 DAXXQ9UER7 740 aaPredicted RBP5.28□□□□□ -1.56
RGPD4-201ENST00000408999 NCAPD3P42695 1498 aa5.28□□□□□ -1.56
RGPD4-201ENST00000408999 PRUNE2Q8WUY3 3088 aa5.27□□□□□ -1.57
RGPD4-201ENST00000408999 BCANQ96GW7 911 aa5.27□□□□□ -1.57
RGPD4-201ENST00000408999 KIF27Q86VH2 1401 aa5.27□□□□□ -1.57
RGPD4-201ENST00000408999 SMARCA2P51531 1590 aa5.26□□□□□ -1.57
RGPD4-201ENST00000408999 CEP164Q9UPV0 1460 aa5.26□□□□□ -1.57
RGPD4-201ENST00000408999 WIZO95785 1651 aa5.26□□□□□ -1.57
RGPD4-201ENST00000408999 MTUS2Q5JR59 1369 aa5.26□□□□□ -1.57
RGPD4-201ENST00000408999 CCDC88BA6NC98 1476 aa5.26□□□□□ -1.57
RGPD4-201ENST00000408999 CHIC2Q9UKJ5 165 aa5.26□□□□□ -1.57
RGPD4-201ENST00000408999 NPM1P06748 294 aaKnown RBP eCLIP5.25□□□□□ -1.57
RGPD4-201ENST00000408999 TONSLQ96HA7 1378 aa5.25□□□□□ -1.57
RGPD4-201ENST00000408999 HTTP42858 3142 aa5.25□□□□□ -1.57
RGPD4-201ENST00000408999 TOP2AP11388 1531 aaKnown RBP5.25□□□□□ -1.57
RGPD4-201ENST00000408999 UBE2Q2Q8WVN8 375 aa5.24□□□□□ -1.57
RGPD4-201ENST00000408999 WDR97A6NE52 1622 aa5.23□□□□□ -1.57
RGPD4-201ENST00000408999 CSMD1Q96PZ7 3565 aa5.23□□□□□ -1.57
RGPD4-201ENST00000408999 ESF1Q9H501 851 aaKnown RBP5.23□□□□□ -1.57
RGPD4-201ENST00000408999 TNIKQ9UKE5 1360 aa5.23□□□□□ -1.57
RGPD4-201ENST00000408999 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.22□□□□□ -1.57
RGPD4-201ENST00000408999 CHGAP10645 457 aaKnown RBP5.22□□□□□ -1.57
RGPD4-201ENST00000408999 CSMD2Q7Z408 3487 aa5.22□□□□□ -1.57
RGPD4-201ENST00000408999 CLSPNQ9HAW4 1339 aa5.22□□□□□ -1.57
RGPD4-201ENST00000408999 PLPPR3Q6T4P5 718 aa5.22□□□□□ -1.57
RGPD4-201ENST00000408999 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.22□□□□□ -1.57
RGPD4-201ENST00000408999 SMARCA4P51532 1647 aa5.21□□□□□ -1.58
RGPD4-201ENST00000408999 CUX2O14529 1486 aa5.21□□□□□ -1.58
RGPD4-201ENST00000408999 SIN3AQ96ST3 1273 aa5.21□□□□□ -1.58
RGPD4-201ENST00000408999 STAG3Q9UJ98 1225 aa5.21□□□□□ -1.58
RGPD4-201ENST00000408999 CFAP47Q6ZTR5 3102 aa5.21□□□□□ -1.58
RGPD4-201ENST00000408999 PRDM4Q9UKN5 801 aa5.21□□□□□ -1.58
RGPD4-201ENST00000408999 SOGA1O94964 1423 aa5.21□□□□□ -1.58
RGPD4-201ENST00000408999 ADGRG4Q8IZF6 3080 aa5.2□□□□□ -1.58
RGPD4-201ENST00000408999 CANXP27824 592 aaKnown RBP5.19□□□□□ -1.58
RGPD4-201ENST00000408999 RRP7BPQ9NSQ0 103 aa5.19□□□□□ -1.58
RGPD4-201ENST00000408999 BOD1L1Q8NFC6 3051 aa5.19□□□□□ -1.58
RGPD4-201ENST00000408999 SLC24A1O60721 1099 aa5.19□□□□□ -1.58
RGPD4-201ENST00000408999 TSPY4P0CV99 314 aa5.19□□□□□ -1.58
RGPD4-201ENST00000408999 TSPY10P0CW01 314 aa5.19□□□□□ -1.58
RGPD4-201ENST00000408999 SVEP1Q4LDE5 3571 aa5.18□□□□□ -1.58
RGPD4-201ENST00000408999 WASHC2AQ641Q2 1341 aa5.18□□□□□ -1.58
RGPD4-201ENST00000408999 LRRIQ1Q96JM4 1722 aa5.18□□□□□ -1.58
RGPD4-201ENST00000408999 DHX57Q6P158 1386 aaKnown RBP5.18□□□□□ -1.58
RGPD4-201ENST00000408999 AQRO60306 1485 aaKnown RBP eCLIP5.18□□□□□ -1.58
RGPD4-201ENST00000408999 NEFMP07197 916 aa5.17□□□□□ -1.58
RGPD4-201ENST00000408999 PLEKHD1A6NEE1 506 aa5.17□□□□□ -1.58
RGPD4-201ENST00000408999 CARMIL1Q5VZK9 1371 aa5.17□□□□□ -1.58
RGPD4-201ENST00000408999 NBEAQ8NFP9 2946 aa5.17□□□□□ -1.58
RGPD4-201ENST00000408999 KDM2AQ9Y2K7 1162 aa5.16□□□□□ -1.58
RGPD4-201ENST00000408999 PDS5BQ9NTI5 1447 aa5.16□□□□□ -1.58
RGPD4-201ENST00000408999 PPP1R15AO75807 674 aaPredicted RBP5.16□□□□□ -1.58
RGPD4-201ENST00000408999 DDX10Q13206 875 aaKnown RBP5.16□□□□□ -1.58
RGPD4-201ENST00000408999 ATAD2BQ9ULI0 1458 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms