RNA–Protein interactions for RNA: ENST00000408712.1

SNORA3.3-201, humanhuman

BASIC

Gene SNORA3, Length 125 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA3.3-201ENST00000408712 PBRM1Q86U86 1689 aa6.35□□□□□ -1.39
SNORA3.3-201ENST00000408712 CLASP1Q7Z460 1538 aa6.35□□□□□ -1.39
SNORA3.3-201ENST00000408712 RAPGEF2Q9Y4G8 1499 aa6.34□□□□□ -1.39
SNORA3.3-201ENST00000408712 PTPRGP23470 1445 aa6.34□□□□□ -1.39
SNORA3.3-201ENST00000408712 TTBK1Q5TCY1 1321 aaPredicted RBP6.33□□□□□ -1.4
SNORA3.3-201ENST00000408712 UBTFP17480 764 aaKnown RBP6.33□□□□□ -1.4
SNORA3.3-201ENST00000408712 RUSC2Q8N2Y8 1516 aa6.33□□□□□ -1.4
SNORA3.3-201ENST00000408712 ARAP1Q96P48 1450 aa6.33□□□□□ -1.4
SNORA3.3-201ENST00000408712 EEA1Q15075 1411 aa6.33□□□□□ -1.4
SNORA3.3-201ENST00000408712 TNIKQ9UKE5 1360 aa6.32□□□□□ -1.4
SNORA3.3-201ENST00000408712 ADAMTS12P58397 1594 aa6.31□□□□□ -1.4
SNORA3.3-201ENST00000408712 FAM69CQ0P6D2 419 aa6.31□□□□□ -1.4
SNORA3.3-201ENST00000408712 CUL7Q14999 1698 aa6.3□□□□□ -1.4
SNORA3.3-201ENST00000408712 CEP170Q5SW79 1584 aa6.3□□□□□ -1.4
SNORA3.3-201ENST00000408712 PRXQ9BXM0 1461 aa6.28□□□□□ -1.4
SNORA3.3-201ENST00000408712 P3H3Q8IVL6 736 aa6.28□□□□□ -1.4
SNORA3.3-201ENST00000408712 SHROOM2Q13796 1616 aa6.26□□□□□ -1.41
SNORA3.3-201ENST00000408712 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.26□□□□□ -1.41
SNORA3.3-201ENST00000408712 RANGAP1P46060 587 aaPredicted RBP6.26□□□□□ -1.41
SNORA3.3-201ENST00000408712 HNRNPUL2Q1KMD3 747 aaKnown RBP6.26□□□□□ -1.41
SNORA3.3-201ENST00000408712 GOLGA3Q08378 1498 aa6.26□□□□□ -1.41
SNORA3.3-201ENST00000408712 UACAQ9BZF9 1416 aa6.25□□□□□ -1.41
SNORA3.3-201ENST00000408712 PLEKHD1A6NEE1 506 aa6.25□□□□□ -1.41
SNORA3.3-201ENST00000408712 KCNH8Q96L42 1107 aa6.25□□□□□ -1.41
SNORA3.3-201ENST00000408712 ERCC6L2Q5T890 1561 aa6.24□□□□□ -1.41
SNORA3.3-201ENST00000408712 UGGT2Q9NYU1 1516 aa6.24□□□□□ -1.41
SNORA3.3-201ENST00000408712 EHMT2Q96KQ7 1210 aa6.23□□□□□ -1.41
SNORA3.3-201ENST00000408712 CDK11AQ9UQ88 783 aaPredicted RBP6.23□□□□□ -1.41
SNORA3.3-201ENST00000408712 IQGAP2Q13576 1575 aa6.23□□□□□ -1.41
SNORA3.3-201ENST00000408712 ATP1B4Q9UN42 357 aaPredicted RBP6.22□□□□□ -1.41
SNORA3.3-201ENST00000408712 UHRF1BP1LA0JNW5 1464 aa6.22□□□□□ -1.41
SNORA3.3-201ENST00000408712 PLB1Q6P1J6 1458 aa6.22□□□□□ -1.41
SNORA3.3-201ENST00000408712 DISP1Q96F81 1524 aa6.21□□□□□ -1.42
SNORA3.3-201ENST00000408712 ABCC10Q5T3U5 1492 aa6.21□□□□□ -1.42
SNORA3.3-201ENST00000408712 ABCC2Q92887 1545 aa6.2□□□□□ -1.42
SNORA3.3-201ENST00000408712 ASXL2Q76L83 1435 aa6.18□□□□□ -1.42
SNORA3.3-201ENST00000408712 AEBP2Q6ZN18 517 aaPredicted RBP6.18□□□□□ -1.42
SNORA3.3-201ENST00000408712 MAPKBP1O60336 1514 aa6.17□□□□□ -1.42
SNORA3.3-201ENST00000408712 KDM5BQ9UGL1 1544 aa6.17□□□□□ -1.42
SNORA3.3-201ENST00000408712 PHLDB1Q86UU1 1377 aa6.17□□□□□ -1.42
SNORA3.3-201ENST00000408712 LOC105371045A0A1W2PR82 267 aa6.16□□□□□ -1.42
SNORA3.3-201ENST00000408712 ARID3CA6NKF2 412 aa6.16□□□□□ -1.42
SNORA3.3-201ENST00000408712 ATP10BO94823 1461 aa6.15□□□□□ -1.42
SNORA3.3-201ENST00000408712 CD109Q6YHK3 1445 aa6.15□□□□□ -1.43
SNORA3.3-201ENST00000408712 ADCY10Q96PN6 1610 aa6.14□□□□□ -1.43
SNORA3.3-201ENST00000408712 FMN1Q68DA7 1419 aa6.14□□□□□ -1.43
SNORA3.3-201ENST00000408712 KIAA0556O60303 1618 aa6.14□□□□□ -1.43
SNORA3.3-201ENST00000408712 EFCAB2Q5VUJ9 269 aa6.13□□□□□ -1.43
SNORA3.3-201ENST00000408712 KIF21BO75037 1637 aa6.13□□□□□ -1.43
SNORA3.3-201ENST00000408712 EPRSP07814 1512 aaKnown RBP6.12□□□□□ -1.43
SNORA3.3-201ENST00000408712 CTTNBP2Q8WZ74 1663 aa6.12□□□□□ -1.43
SNORA3.3-201ENST00000408712 ABCA8O94911 1581 aa6.11□□□□□ -1.43
SNORA3.3-201ENST00000408712 GLI2P10070 1586 aa6.11□□□□□ -1.43
SNORA3.3-201ENST00000408712 WDR7Q9Y4E6 1490 aa6.11□□□□□ -1.43
SNORA3.3-201ENST00000408712 FHOD3Q2V2M9 1422 aa6.11□□□□□ -1.43
SNORA3.3-201ENST00000408712 TEX14Q8IWB6 1497 aa6.1□□□□□ -1.43
SNORA3.3-201ENST00000408712 APLP2Q06481 763 aa6.1□□□□□ -1.43
SNORA3.3-201ENST00000408712 EFCAB5A4FU69 1503 aa6.09□□□□□ -1.43
SNORA3.3-201ENST00000408712 MAGI3Q5TCQ9 1506 aa6.09□□□□□ -1.44
SNORA3.3-201ENST00000408712 ARHGAP35Q9NRY4 1499 aa6.09□□□□□ -1.44
SNORA3.3-201ENST00000408712 RAPGEF3O95398 923 aa6.08□□□□□ -1.44
SNORA3.3-201ENST00000408712 RSPH4AQ5TD94 716 aa6.08□□□□□ -1.44
SNORA3.3-201ENST00000408712 SAMD9Q5K651 1589 aa6.08□□□□□ -1.44
SNORA3.3-201ENST00000408712 KIF13AQ9H1H9 1805 aa6.08□□□□□ -1.44
SNORA3.3-201ENST00000408712 CLIP1P30622 1438 aa6.08□□□□□ -1.44
SNORA3.3-201ENST00000408712 ZCCHC11Q5TAX3 1644 aaKnown RBP6.07□□□□□ -1.44
SNORA3.3-201ENST00000408712 DIP2BQ9P265 1576 aa6.07□□□□□ -1.44
SNORA3.3-201ENST00000408712 MYT1LQ9UL68 1186 aa6.07□□□□□ -1.44
SNORA3.3-201ENST00000408712 TSPOAP1O95153 1857 aa6.07□□□□□ -1.44
SNORA3.3-201ENST00000408712 KDM4FA0A1W2PPD8 638 aa6.06□□□□□ -1.44
SNORA3.3-201ENST00000408712 NUP153P49790 1475 aaKnown RBP6.06□□□□□ -1.44
SNORA3.3-201ENST00000408712 PLCH2O75038 1416 aa6.06□□□□□ -1.44
SNORA3.3-201ENST00000408712 CASKIN1Q8WXD9 1431 aa6.06□□□□□ -1.44
SNORA3.3-201ENST00000408712 RAPGEF6Q8TEU7 1601 aa6.06□□□□□ -1.44
SNORA3.3-201ENST00000408712 ARID4BQ4LE39 1312 aaPredicted RBP6.05□□□□□ -1.44
SNORA3.3-201ENST00000408712 CFDP1Q9UEE9 299 aaPredicted RBP6.05□□□□□ -1.44
SNORA3.3-201ENST00000408712 NEO1Q92859 1461 aa6.04□□□□□ -1.44
SNORA3.3-201ENST00000408712 COL17A1Q9UMD9 1497 aaPredicted RBP6.04□□□□□ -1.44
SNORA3.3-201ENST00000408712 AFAP1Q8N556 730 aa6.04□□□□□ -1.44
SNORA3.3-201ENST00000408712 ZNF777Q9ULD5 760 aaPredicted RBP6.04□□□□□ -1.44
SNORA3.3-201ENST00000408712 AKNAQ7Z591 1439 aa6.04□□□□□ -1.44
SNORA3.3-201ENST00000408712 ARAP3Q8WWN8 1544 aa6.04□□□□□ -1.44
SNORA3.3-201ENST00000408712 TROQ12816 1431 aaPredicted RBP6.03□□□□□ -1.44
SNORA3.3-201ENST00000408712 KDM6BO15054 1643 aa6.03□□□□□ -1.44
SNORA3.3-201ENST00000408712 CFAP43Q8NDM7 1665 aa6.02□□□□□ -1.45
SNORA3.3-201ENST00000408712 TSPY4P0CV99 314 aa6.02□□□□□ -1.45
SNORA3.3-201ENST00000408712 TSPY10P0CW01 314 aa6.02□□□□□ -1.45
SNORA3.3-201ENST00000408712 MTUS2Q5JR59 1369 aa6.02□□□□□ -1.45
SNORA3.3-201ENST00000408712 MAP3K4Q9Y6R4 1608 aa6.02□□□□□ -1.45
SNORA3.3-201ENST00000408712 DENND4BO75064 1496 aaPredicted RBP6.02□□□□□ -1.45
SNORA3.3-201ENST00000408712 SCAPERQ9BY12 1400 aa6.01□□□□□ -1.45
SNORA3.3-201ENST00000408712 HNRNPMP52272 730 aaKnown RBP eCLIP6.01□□□□□ -1.45
SNORA3.3-201ENST00000408712 ESF1Q9H501 851 aaKnown RBP6.01□□□□□ -1.45
SNORA3.3-201ENST00000408712 PPP6R1Q9UPN7 881 aa6.01□□□□□ -1.45
SNORA3.3-201ENST00000408712 CCDC18Q5T9S5 1454 aa6.01□□□□□ -1.45
SNORA3.3-201ENST00000408712 CEP162Q5TB80 1403 aa6□□□□□ -1.45
SNORA3.3-201ENST00000408712 CCNB3Q8WWL7 1395 aa6□□□□□ -1.45
SNORA3.3-201ENST00000408712 FANCAO15360 1455 aa6□□□□□ -1.45
SNORA3.3-201ENST00000408712 ABCA9Q8IUA7 1624 aa5.99□□□□□ -1.45
SNORA3.3-201ENST00000408712 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms