RNA–Protein interactions for RNA: ENST00000406503.1

PRAME-206, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRAME, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-206ENST00000406503 JPH4Q96JJ6 628 aa22.9■■□□□ 1.26
PRAME-206ENST00000406503 ADCY10Q96PN6 1610 aa22.86■■□□□ 1.25
PRAME-206ENST00000406503 IGF1RP08069 1367 aa22.84■■□□□ 1.25
PRAME-206ENST00000406503 KIAA0586Q9BVV6 1533 aa22.82■■□□□ 1.24
PRAME-206ENST00000406503 KIF27Q86VH2 1401 aa22.81■■□□□ 1.24
PRAME-206ENST00000406503 MAPKBP1O60336 1514 aa22.79■■□□□ 1.24
PRAME-206ENST00000406503 DIP2BQ9P265 1576 aa22.78■■□□□ 1.24
PRAME-206ENST00000406503 ABCC10Q5T3U5 1492 aa22.75■■□□□ 1.23
PRAME-206ENST00000406503 TSPOAP1O95153 1857 aa22.68■■□□□ 1.22
PRAME-206ENST00000406503 CARMIL1Q5VZK9 1371 aa22.66■■□□□ 1.22
PRAME-206ENST00000406503 AEBP2Q6ZN18 517 aaPredicted RBP22.64■■□□□ 1.21
PRAME-206ENST00000406503 IQGAP2Q13576 1575 aa22.63■■□□□ 1.21
PRAME-206ENST00000406503 FAM69CQ0P6D2 419 aa22.62■■□□□ 1.21
PRAME-206ENST00000406503 NPM1P06748 294 aaKnown RBP eCLIP22.58■■□□□ 1.21
PRAME-206ENST00000406503 PPRC1Q5VV67 1664 aaKnown RBP22.56■■□□□ 1.2
PRAME-206ENST00000406503 KDM6BO15054 1643 aa22.56■■□□□ 1.2
PRAME-206ENST00000406503 DISP1Q96F81 1524 aa22.56■■□□□ 1.2
PRAME-206ENST00000406503 PTPRGP23470 1445 aa22.56■■□□□ 1.2
PRAME-206ENST00000406503 TNIKQ9UKE5 1360 aa22.53■■□□□ 1.2
PRAME-206ENST00000406503 ABCC2Q92887 1545 aa22.53■■□□□ 1.2
PRAME-206ENST00000406503 CARMIL2Q6F5E8 1435 aa22.51■■□□□ 1.19
PRAME-206ENST00000406503 CTTNBP2Q8WZ74 1663 aa22.49■■□□□ 1.19
PRAME-206ENST00000406503 UGGT2Q9NYU1 1516 aa22.49■■□□□ 1.19
PRAME-206ENST00000406503 UHRF1BP1LA0JNW5 1464 aa22.48■■□□□ 1.19
PRAME-206ENST00000406503 RAPGEF2Q9Y4G8 1499 aa22.47■■□□□ 1.19
PRAME-206ENST00000406503 GLI2P10070 1586 aa22.47■■□□□ 1.19
PRAME-206ENST00000406503 KIAA0556O60303 1618 aa22.47■■□□□ 1.19
PRAME-206ENST00000406503 TTBK1Q5TCY1 1321 aaPredicted RBP22.45■■□□□ 1.18
PRAME-206ENST00000406503 ZCCHC11Q5TAX3 1644 aaKnown RBP22.44■■□□□ 1.18
PRAME-206ENST00000406503 ASXL2Q76L83 1435 aa22.44■■□□□ 1.18
PRAME-206ENST00000406503 UACAQ9BZF9 1416 aa22.42■■□□□ 1.18
PRAME-206ENST00000406503 MAP3K4Q9Y6R4 1608 aa22.41■■□□□ 1.18
PRAME-206ENST00000406503 KDM5BQ9UGL1 1544 aa22.41■■□□□ 1.18
PRAME-206ENST00000406503 PLB1Q6P1J6 1458 aa22.4■■□□□ 1.18
PRAME-206ENST00000406503 EPRSP07814 1512 aaKnown RBP22.34■■□□□ 1.17
PRAME-206ENST00000406503 KDM4FA0A1W2PPD8 638 aa22.31■■□□□ 1.16
PRAME-206ENST00000406503 COL17A1Q9UMD9 1497 aaPredicted RBP22.28■■□□□ 1.16
PRAME-206ENST00000406503 ABCA8O94911 1581 aa22.28■■□□□ 1.16
PRAME-206ENST00000406503 PRXQ9BXM0 1461 aa22.28■■□□□ 1.16
PRAME-206ENST00000406503 WDR7Q9Y4E6 1490 aa22.22■■□□□ 1.15
PRAME-206ENST00000406503 CFAP43Q8NDM7 1665 aa22.2■■□□□ 1.15
PRAME-206ENST00000406503 GOLGA3Q08378 1498 aa22.2■■□□□ 1.14
PRAME-206ENST00000406503 TEX14Q8IWB6 1497 aa22.18■■□□□ 1.14
PRAME-206ENST00000406503 ADGRL1O94910 1474 aa22.15■■□□□ 1.14
PRAME-206ENST00000406503 SAMD9Q5K651 1589 aa22.11■■□□□ 1.13
PRAME-206ENST00000406503 MAGI3Q5TCQ9 1506 aa22.1■■□□□ 1.13
PRAME-206ENST00000406503 CD109Q6YHK3 1445 aa22.05■■□□□ 1.12
PRAME-206ENST00000406503 ATP10BO94823 1461 aa22.02■■□□□ 1.12
PRAME-206ENST00000406503 RAPGEF6Q8TEU7 1601 aa22.01■■□□□ 1.11
PRAME-206ENST00000406503 ABCA9Q8IUA7 1624 aa22■■□□□ 1.11
PRAME-206ENST00000406503 KIF21BO75037 1637 aa21.99■■□□□ 1.11
PRAME-206ENST00000406503 KCNH8Q96L42 1107 aa21.98■■□□□ 1.11
PRAME-206ENST00000406503 P3H3Q8IVL6 736 aa21.96■■□□□ 1.11
PRAME-206ENST00000406503 CSRNP3Q8WYN3 585 aa21.94■■□□□ 1.1
PRAME-206ENST00000406503 ARAP3Q8WWN8 1544 aa21.93■■□□□ 1.1
PRAME-206ENST00000406503 HECW2Q9P2P5 1572 aa21.92■■□□□ 1.1
PRAME-206ENST00000406503 ARID3CA6NKF2 412 aa21.92■■□□□ 1.1
PRAME-206ENST00000406503 NUP153P49790 1475 aaKnown RBP21.9■■□□□ 1.1
PRAME-206ENST00000406503 FRMPD1Q5SYB0 1578 aa21.87■■□□□ 1.09
PRAME-206ENST00000406503 EEA1Q15075 1411 aa21.87■■□□□ 1.09
PRAME-206ENST00000406503 FHOD3Q2V2M9 1422 aa21.85■■□□□ 1.09
PRAME-206ENST00000406503 ADAMTSL3P82987 1691 aa21.82■■□□□ 1.08
PRAME-206ENST00000406503 RICTORQ6R327 1708 aa21.8■■□□□ 1.08
PRAME-206ENST00000406503 NEO1Q92859 1461 aa21.79■■□□□ 1.08
PRAME-206ENST00000406503 EFCAB5A4FU69 1503 aa21.78■■□□□ 1.08
PRAME-206ENST00000406503 PHLDB1Q86UU1 1377 aa21.76■■□□□ 1.07
PRAME-206ENST00000406503 BCORL1Q5H9F3 1711 aa21.76■■□□□ 1.07
PRAME-206ENST00000406503 TTC37Q6PGP7 1564 aa21.75■■□□□ 1.07
PRAME-206ENST00000406503 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.74■■□□□ 1.077e-13■□□□□ 11.3
PRAME-206ENST00000406503 FAM9AQ8IZU1 332 aaPredicted RBP21.73■■□□□ 1.07
PRAME-206ENST00000406503 RAPGEF3O95398 923 aa21.72■■□□□ 1.07
PRAME-206ENST00000406503 RANGAP1P46060 587 aaPredicted RBP21.72■■□□□ 1.07
PRAME-206ENST00000406503 SIGLEC1Q9BZZ2 1709 aa21.71■■□□□ 1.07
PRAME-206ENST00000406503 ARHGEF40Q8TER5 1519 aa21.7■■□□□ 1.06
PRAME-206ENST00000406503 CFAP74Q9C0B2 1584 aa21.7■■□□□ 1.06
PRAME-206ENST00000406503 MADDQ8WXG6 1647 aa21.69■■□□□ 1.06
PRAME-206ENST00000406503 CDK13Q14004 1512 aaKnown RBP21.69■■□□□ 1.06
PRAME-206ENST00000406503 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.68■■□□□ 1.06
PRAME-206ENST00000406503 HNRNPUL2Q1KMD3 747 aaKnown RBP21.68■■□□□ 1.06
PRAME-206ENST00000406503 ILDR1Q86SU0 546 aaPredicted RBP21.68■■□□□ 1.06
PRAME-206ENST00000406503 LRRIQ1Q96JM4 1722 aa21.66■■□□□ 1.06
PRAME-206ENST00000406503 PTPRMP28827 1452 aa21.66■■□□□ 1.06
PRAME-206ENST00000406503 ZMYM4Q5VZL5 1548 aa21.63■■□□□ 1.05
PRAME-206ENST00000406503 FANCAO15360 1455 aa21.63■■□□□ 1.05
PRAME-206ENST00000406503 AKNAQ7Z591 1439 aa21.63■■□□□ 1.05
PRAME-206ENST00000406503 DENND4BO75064 1496 aaPredicted RBP21.62■■□□□ 1.05
PRAME-206ENST00000406503 RIMS1Q86UR5 1692 aaKnown RBP21.62■■□□□ 1.05
PRAME-206ENST00000406503 PLEKHD1A6NEE1 506 aa21.6■■□□□ 1.05
PRAME-206ENST00000406503 MYO5CQ9NQX4 1742 aa21.6■■□□□ 1.05
PRAME-206ENST00000406503 ARHGAP35Q9NRY4 1499 aa21.59■■□□□ 1.05
PRAME-206ENST00000406503 HECW1Q76N89 1606 aa21.58■■□□□ 1.05
PRAME-206ENST00000406503 KIF14Q15058 1648 aa21.56■■□□□ 1.04
PRAME-206ENST00000406503 ZFYVE16Q7Z3T8 1539 aa21.54■■□□□ 1.04
PRAME-206ENST00000406503 YEATS2Q9ULM3 1422 aa21.54■■□□□ 1.04
PRAME-206ENST00000406503 FER1L4A9Z1Z3 1794 aa21.52■■□□□ 1.04
PRAME-206ENST00000406503 PCF11O94913 1555 aaKnown RBP21.52■■□□□ 1.04
PRAME-206ENST00000406503 PLCH2O75038 1416 aa21.51■■□□□ 1.03
PRAME-206ENST00000406503 LMTK3Q96Q04 1460 aa21.51■■□□□ 1.03
PRAME-206ENST00000406503 FMN1Q68DA7 1419 aa21.5■■□□□ 1.03
PRAME-206ENST00000406503 EHMT2Q96KQ7 1210 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms