RNA–Protein interactions for RNA: ENST00000406246.7

RELA-202, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RELA, Length 2,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-202ENST00000406246 APLP2Q06481 763 aa29.43■■■□□ 2.3
RELA-202ENST00000406246 GRIN2BQ13224 1484 aa29.43■■■□□ 2.3
RELA-202ENST00000406246 CTTNBP2Q8WZ74 1663 aa29.41■■■□□ 2.3
RELA-202ENST00000406246 ADAMTS12P58397 1594 aa29.37■■■□□ 2.29
RELA-202ENST00000406246 FHAD1B1AJZ9 1412 aa29.35■■■□□ 2.29
RELA-202ENST00000406246 SNAPC4Q5SXM2 1469 aa29.35■■■□□ 2.29
RELA-202ENST00000406246 FHOD3Q2V2M9 1422 aa29.35■■■□□ 2.29
RELA-202ENST00000406246 KANK4Q5T7N3 995 aaPredicted RBP29.31■■■□□ 2.28
RELA-202ENST00000406246 ATP1B4Q9UN42 357 aaPredicted RBP29.31■■■□□ 2.28
RELA-202ENST00000406246 FBLN2P98095 1184 aa29.31■■■□□ 2.28
RELA-202ENST00000406246 HRCP23327 699 aa29.22■■■□□ 2.27
RELA-202ENST00000406246 CHMP7Q8WUX9 453 aaPredicted RBP29.18■■■□□ 2.26
RELA-202ENST00000406246 PCF11O94913 1555 aaKnown RBP29.14■■■□□ 2.26
RELA-202ENST00000406246 GRIN2AQ12879 1464 aa29.13■■■□□ 2.25
RELA-202ENST00000406246 EFCAB5A4FU69 1503 aa29.12■■■□□ 2.25
RELA-202ENST00000406246 IQGAP2Q13576 1575 aa29.1■■■□□ 2.25
RELA-202ENST00000406246 MAGI1Q96QZ7 1491 aaPredicted RBP29.08■■■□□ 2.25
RELA-202ENST00000406246 SAMD9Q5K651 1589 aa29.08■■■□□ 2.25
RELA-202ENST00000406246 HNRNPUL2Q1KMD3 747 aaKnown RBP29.06■■■□□ 2.24
RELA-202ENST00000406246 SYNJ2O15056 1496 aa29.05■■■□□ 2.24
RELA-202ENST00000406246 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.01■■■□□ 2.24
RELA-202ENST00000406246 TIAM1Q13009 1591 aa29■■■□□ 2.23
RELA-202ENST00000406246 CEP170Q5SW79 1584 aa29■■■□□ 2.23
RELA-202ENST00000406246 ARID3CA6NKF2 412 aa28.99■■■□□ 2.23
RELA-202ENST00000406246 KIAA0586Q9BVV6 1533 aa28.96■■■□□ 2.23
RELA-202ENST00000406246 FMN1Q68DA7 1419 aa28.95■■■□□ 2.23
RELA-202ENST00000406246 CASKIN1Q8WXD9 1431 aa28.94■■■□□ 2.22
RELA-202ENST00000406246 FYCO1Q9BQS8 1478 aa28.92■■■□□ 2.22
RELA-202ENST00000406246 LRRIQ1Q96JM4 1722 aa28.9■■■□□ 2.22
RELA-202ENST00000406246 LRRC9Q6ZRR7 1453 aa28.89■■■□□ 2.22
RELA-202ENST00000406246 UGGT2Q9NYU1 1516 aa28.87■■■□□ 2.21
RELA-202ENST00000406246 DISP1Q96F81 1524 aa28.87■■■□□ 2.21
RELA-202ENST00000406246 CFAP43Q8NDM7 1665 aa28.86■■■□□ 2.21
RELA-202ENST00000406246 NUP160Q12769 1436 aa28.82■■■□□ 2.2
RELA-202ENST00000406246 ITGAEP38570 1179 aa28.82■■■□□ 2.2
RELA-202ENST00000406246 CHD1O14646 1710 aa28.82■■■□□ 2.2
RELA-202ENST00000406246 JPH4Q96JJ6 628 aa28.82■■■□□ 2.2
RELA-202ENST00000406246 KIAA0556O60303 1618 aa28.81■■■□□ 2.2
RELA-202ENST00000406246 MAP3K1Q13233 1512 aa28.81■■■□□ 2.2
RELA-202ENST00000406246 CCER1Q8TC90 406 aaPredicted RBP28.78■■■□□ 2.2
RELA-202ENST00000406246 PHLDB1Q86UU1 1377 aa28.78■■■□□ 2.2
RELA-202ENST00000406246 MTUS2Q5JR59 1369 aa28.72■■■□□ 2.19
RELA-202ENST00000406246 CDK13Q14004 1512 aaKnown RBP28.71■■■□□ 2.19
RELA-202ENST00000406246 CCNB3Q8WWL7 1395 aa28.7■■■□□ 2.18
RELA-202ENST00000406246 RRBP1Q9P2E9 1410 aaKnown RBP28.7■■■□□ 2.18
RELA-202ENST00000406246 FAM50AQ14320 339 aaKnown RBP28.66■■■□□ 2.18
RELA-202ENST00000406246 MAGI3Q5TCQ9 1506 aa28.65■■■□□ 2.18
RELA-202ENST00000406246 HECW1Q76N89 1606 aa28.64■■■□□ 2.18
RELA-202ENST00000406246 EPRSP07814 1512 aaKnown RBP28.63■■■□□ 2.17
RELA-202ENST00000406246 PLB1Q6P1J6 1458 aa28.63■■■□□ 2.17
RELA-202ENST00000406246 CARMIL2Q6F5E8 1435 aa28.6■■■□□ 2.17
RELA-202ENST00000406246 PRG4Q92954 1404 aaPredicted RBP28.59■■■□□ 2.17
RELA-202ENST00000406246 NUP153P49790 1475 aaKnown RBP28.57■■■□□ 2.16
RELA-202ENST00000406246 RAPGEF6Q8TEU7 1601 aa28.56■■■□□ 2.16
RELA-202ENST00000406246 CCDC18Q5T9S5 1454 aa28.54■■■□□ 2.16
RELA-202ENST00000406246 NCOA2Q15596 1464 aa28.53■■■□□ 2.16
RELA-202ENST00000406246 ERCC6L2Q5T890 1561 aa28.5■■■□□ 2.15
RELA-202ENST00000406246 ZEB1P37275 1124 aaPredicted RBP28.5■■■□□ 2.15
RELA-202ENST00000406246 EHBP1L1Q8N3D4 1523 aa28.48■■■□□ 2.15
RELA-202ENST00000406246 SUPT6HQ7KZ85 1726 aaKnown RBP28.47■■■□□ 2.15
RELA-202ENST00000406246 FGD6Q6ZV73 1430 aa28.44■■■□□ 2.14
RELA-202ENST00000406246 PTPRGP23470 1445 aa28.4■■■□□ 2.14
RELA-202ENST00000406246 MYOM3Q5VTT5 1437 aa28.38■■■□□ 2.13
RELA-202ENST00000406246 SHROOM2Q13796 1616 aa28.36■■■□□ 2.13
RELA-202ENST00000406246 ABCA8O94911 1581 aa28.34■■■□□ 2.13
RELA-202ENST00000406246 ARHGEF11O15085 1522 aa28.33■■■□□ 2.13
RELA-202ENST00000406246 CLASP1Q7Z460 1538 aa28.32■■■□□ 2.12
RELA-202ENST00000406246 CDK11AQ9UQ88 783 aaPredicted RBP28.29■■■□□ 2.12
RELA-202ENST00000406246 ATP10BO94823 1461 aa28.28■■■□□ 2.12
RELA-202ENST00000406246 PTPRKQ15262 1439 aa28.27■■■□□ 2.12
RELA-202ENST00000406246 RAB3GAP2Q9H2M9 1393 aa28.27■■■□□ 2.12
RELA-202ENST00000406246 PTPN23Q9H3S7 1636 aa28.27■■■□□ 2.12
RELA-202ENST00000406246 KIF14Q15058 1648 aa28.25■■■□□ 2.11
RELA-202ENST00000406246 ZNF644Q9H582 1327 aaPredicted RBP28.25■■■□□ 2.11
RELA-202ENST00000406246 CHIC2Q9UKJ5 165 aa28.24■■■□□ 2.11
RELA-202ENST00000406246 DHX57Q6P158 1386 aaKnown RBP28.23■■■□□ 2.11
RELA-202ENST00000406246 TROQ12816 1431 aaPredicted RBP28.22■■■□□ 2.11
RELA-202ENST00000406246 PLEKHD1A6NEE1 506 aa28.2■■■□□ 2.1
RELA-202ENST00000406246 SETD5Q9C0A6 1442 aa28.19■■■□□ 2.1
RELA-202ENST00000406246 UACAQ9BZF9 1416 aa28.19■■■□□ 2.1
RELA-202ENST00000406246 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.17■■■□□ 2.1
RELA-202ENST00000406246 ZNF777Q9ULD5 760 aaPredicted RBP28.17■■■□□ 2.1
RELA-202ENST00000406246 RRP7BPQ9NSQ0 103 aa28.13■■■□□ 2.09
RELA-202ENST00000406246 OSCARQ8IYS5 282 aa28.11■■■□□ 2.09
RELA-202ENST00000406246 CFDP1Q9UEE9 299 aaPredicted RBP28.09■■■□□ 2.09
RELA-202ENST00000406246 TCOF1Q13428 1488 aaKnown RBP28.08■■■□□ 2.09
RELA-202ENST00000406246 MIA2Q96PC5 1412 aa28.07■■■□□ 2.08
RELA-202ENST00000406246 GPATCH8Q9UKJ3 1502 aaKnown RBP28.06■■■□□ 2.08
RELA-202ENST00000406246 KCNH8Q96L42 1107 aa28.05■■■□□ 2.08
RELA-202ENST00000406246 ABCC2Q92887 1545 aa28.05■■■□□ 2.08
RELA-202ENST00000406246 ADCY10Q96PN6 1610 aa28.04■■■□□ 2.08
RELA-202ENST00000406246 CDC42BPAQ5VT25 1732 aa27.99■■■□□ 2.07
RELA-202ENST00000406246 NAIPQ13075 1403 aa27.99■■■□□ 2.07
RELA-202ENST00000406246 ABCC10Q5T3U5 1492 aa27.98■■■□□ 2.07
RELA-202ENST00000406246 CAMSAP2Q08AD1 1489 aa27.97■■■□□ 2.07
RELA-202ENST00000406246 HFM1A2PYH4 1435 aa27.97■■■□□ 2.07
RELA-202ENST00000406246 ITSN2Q9NZM3 1697 aa27.95■■■□□ 2.07
RELA-202ENST00000406246 DAPK1P53355 1430 aa27.94■■■□□ 2.06
RELA-202ENST00000406246 ZCCHC11Q5TAX3 1644 aaKnown RBP27.94■■■□□ 2.06
RELA-202ENST00000406246 ABCC5O15440 1437 aa27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms