RNA–Protein interactions for RNA: ENST00000406109.5

RPA3-204, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-204ENST00000406109 ADAMTS12P58397 1594 aa11.31□□□□□ -0.6
RPA3-204ENST00000406109 KIF13AQ9H1H9 1805 aa11.3□□□□□ -0.6
RPA3-204ENST00000406109 WRNQ14191 1432 aaPredicted RBP eCLIP11.28□□□□□ -0.6
RPA3-204ENST00000406109 FHAD1B1AJZ9 1412 aa11.26□□□□□ -0.61
RPA3-204ENST00000406109 PRG4Q92954 1404 aaPredicted RBP11.24□□□□□ -0.61
RPA3-204ENST00000406109 JPH4Q96JJ6 628 aa11.23□□□□□ -0.61
RPA3-204ENST00000406109 ERICH3Q5RHP9 1530 aa11.23□□□□□ -0.61
RPA3-204ENST00000406109 TOP2BQ02880 1626 aa11.23□□□□□ -0.61
RPA3-204ENST00000406109 BIVM-ERCC5R4GMW8 1640 aa11.23□□□□□ -0.61
RPA3-204ENST00000406109 ABCC10Q5T3U5 1492 aa11.2□□□□□ -0.62
RPA3-204ENST00000406109 FAM69CQ0P6D2 419 aa11.19□□□□□ -0.62
RPA3-204ENST00000406109 KDM4FA0A1W2PPD8 638 aa11.18□□□□□ -0.62
RPA3-204ENST00000406109 MAPKBP1O60336 1514 aa11.16□□□□□ -0.62
RPA3-204ENST00000406109 MAPK8IP2Q13387 824 aaPredicted RBP11.16□□□□□ -0.62
RPA3-204ENST00000406109 ADCY10Q96PN6 1610 aa11.16□□□□□ -0.62
RPA3-204ENST00000406109 DIP2BQ9P265 1576 aa11.16□□□□□ -0.62
RPA3-204ENST00000406109 RUSC2Q8N2Y8 1516 aa11.15□□□□□ -0.62
RPA3-204ENST00000406109 SUPT5HO00267 1087 aaKnown RBP11.15□□□□□ -0.62
RPA3-204ENST00000406109 NPM1P06748 294 aaKnown RBP eCLIP11.11□□□□□ -0.63
RPA3-204ENST00000406109 TSPOAP1O95153 1857 aa11.1□□□□□ -0.63
RPA3-204ENST00000406109 DMRT2Q9Y5R5 561 aa11.09□□□□□ -0.63
RPA3-204ENST00000406109 KDM6BO15054 1643 aa11.09□□□□□ -0.63
RPA3-204ENST00000406109 IGF1RP08069 1367 aa11.08□□□□□ -0.64
RPA3-204ENST00000406109 KIAA0586Q9BVV6 1533 aa11.08□□□□□ -0.64
RPA3-204ENST00000406109 ILDR1Q86SU0 546 aaPredicted RBP11.06□□□□□ -0.64
RPA3-204ENST00000406109 SCAF1Q9H7N4 1312 aaKnown RBP11.03□□□□□ -0.64
RPA3-204ENST00000406109 PPRC1Q5VV67 1664 aaKnown RBP11.02□□□□□ -0.64
RPA3-204ENST00000406109 PTPRGP23470 1445 aa11.01□□□□□ -0.65
RPA3-204ENST00000406109 ABCC2Q92887 1545 aa11□□□□□ -0.65
RPA3-204ENST00000406109 COL17A1Q9UMD9 1497 aaPredicted RBP11□□□□□ -0.65
RPA3-204ENST00000406109 ASXL2Q76L83 1435 aa10.99□□□□□ -0.65
RPA3-204ENST00000406109 GLI2P10070 1586 aa10.99□□□□□ -0.65
RPA3-204ENST00000406109 CUL7Q14999 1698 aa10.98□□□□□ -0.65
RPA3-204ENST00000406109 TNIKQ9UKE5 1360 aa10.98□□□□□ -0.65
RPA3-204ENST00000406109 KIF27Q86VH2 1401 aa10.98□□□□□ -0.65
RPA3-204ENST00000406109 ADGRL1O94910 1474 aa10.96□□□□□ -0.65
RPA3-204ENST00000406109 PLB1Q6P1J6 1458 aa10.96□□□□□ -0.65
RPA3-204ENST00000406109 CARMIL1Q5VZK9 1371 aa10.96□□□□□ -0.65
RPA3-204ENST00000406109 TTBK1Q5TCY1 1321 aaPredicted RBP10.96□□□□□ -0.65
RPA3-204ENST00000406109 UHRF1BP1LA0JNW5 1464 aa10.95□□□□□ -0.66
RPA3-204ENST00000406109 DISP1Q96F81 1524 aa10.94□□□□□ -0.66
RPA3-204ENST00000406109 CARMIL2Q6F5E8 1435 aa10.93□□□□□ -0.66
RPA3-204ENST00000406109 EPRSP07814 1512 aaKnown RBP10.93□□□□□ -0.66
RPA3-204ENST00000406109 UACAQ9BZF9 1416 aa10.92□□□□□ -0.66
RPA3-204ENST00000406109 KDM5BQ9UGL1 1544 aa10.92□□□□□ -0.66
RPA3-204ENST00000406109 MAP3K4Q9Y6R4 1608 aa10.91□□□□□ -0.66
RPA3-204ENST00000406109 IQGAP2Q13576 1575 aa10.91□□□□□ -0.66
RPA3-204ENST00000406109 HECW2Q9P2P5 1572 aa10.9□□□□□ -0.67
RPA3-204ENST00000406109 ZCCHC11Q5TAX3 1644 aaKnown RBP10.87□□□□□ -0.67
RPA3-204ENST00000406109 UGGT2Q9NYU1 1516 aa10.87□□□□□ -0.67
RPA3-204ENST00000406109 TEX14Q8IWB6 1497 aa10.86□□□□□ -0.67
RPA3-204ENST00000406109 WDR7Q9Y4E6 1490 aa10.83□□□□□ -0.68
RPA3-204ENST00000406109 KIAA0556O60303 1618 aa10.83□□□□□ -0.68
RPA3-204ENST00000406109 RAPGEF2Q9Y4G8 1499 aa10.81□□□□□ -0.68
RPA3-204ENST00000406109 MAGI3Q5TCQ9 1506 aa10.8□□□□□ -0.68
RPA3-204ENST00000406109 CD109Q6YHK3 1445 aa10.79□□□□□ -0.68
RPA3-204ENST00000406109 CFAP43Q8NDM7 1665 aa10.77□□□□□ -0.69
RPA3-204ENST00000406109 KCNH8Q96L42 1107 aa10.77□□□□□ -0.69
RPA3-204ENST00000406109 ABCA8O94911 1581 aa10.77□□□□□ -0.69
RPA3-204ENST00000406109 PPP4R3CPQ6ZMV5 832 aa10.75□□□□□ -0.69
RPA3-204ENST00000406109 KIF21BO75037 1637 aa10.75□□□□□ -0.69
RPA3-204ENST00000406109 ARAP3Q8WWN8 1544 aa10.74□□□□□ -0.69
RPA3-204ENST00000406109 FBXO41Q8TF61 875 aa10.73□□□□□ -0.69
RPA3-204ENST00000406109 CTTNBP2Q8WZ74 1663 aa10.72□□□□□ -0.69
RPA3-204ENST00000406109 ADAMTSL3P82987 1691 aa10.7□□□□□ -0.7
RPA3-204ENST00000406109 PTPRMP28827 1452 aa10.7□□□□□ -0.7
RPA3-204ENST00000406109 GOLGA3Q08378 1498 aa10.7□□□□□ -0.7
RPA3-204ENST00000406109 ATP10BO94823 1461 aa10.69□□□□□ -0.7
RPA3-204ENST00000406109 PRXQ9BXM0 1461 aa10.68□□□□□ -0.7
RPA3-204ENST00000406109 RAPGEF3O95398 923 aa10.68□□□□□ -0.7
RPA3-204ENST00000406109 DCAF8L1A6NGE4 600 aa10.67□□□□□ -0.7
RPA3-204ENST00000406109 ARID3CA6NKF2 412 aa10.67□□□□□ -0.7
RPA3-204ENST00000406109 ABCA9Q8IUA7 1624 aa10.66□□□□□ -0.7
RPA3-204ENST00000406109 PHLDB1Q86UU1 1377 aa10.65□□□□□ -0.7
RPA3-204ENST00000406109 CACNB1Q02641 598 aaPredicted RBP10.65□□□□□ -0.7
RPA3-204ENST00000406109 FRMPD1Q5SYB0 1578 aa10.65□□□□□ -0.71
RPA3-204ENST00000406109 LMTK3Q96Q04 1460 aa10.64□□□□□ -0.71
RPA3-204ENST00000406109 BCORL1Q5H9F3 1711 aa10.64□□□□□ -0.71
RPA3-204ENST00000406109 P3H3Q8IVL6 736 aa10.63□□□□□ -0.71
RPA3-204ENST00000406109 MADDQ8WXG6 1647 aa10.62□□□□□ -0.71
RPA3-204ENST00000406109 NEO1Q92859 1461 aa10.62□□□□□ -0.71
RPA3-204ENST00000406109 PCF11O94913 1555 aaKnown RBP10.62□□□□□ -0.71
RPA3-204ENST00000406109 HOXD11P31277 338 aaPredicted RBP10.62□□□□□ -0.71
RPA3-204ENST00000406109 SAMD9Q5K651 1589 aa10.59□□□□□ -0.71
RPA3-204ENST00000406109 ARID4BQ4LE39 1312 aaPredicted RBP10.58□□□□□ -0.72
RPA3-204ENST00000406109 NUP153P49790 1475 aaKnown RBP10.57□□□□□ -0.72
RPA3-204ENST00000406109 HSPA2P54652 639 aa10.57□□□□□ -0.72
RPA3-204ENST00000406109 RICTORQ6R327 1708 aa10.57□□□□□ -0.72
RPA3-204ENST00000406109 SIGLEC1Q9BZZ2 1709 aa10.57□□□□□ -0.72
RPA3-204ENST00000406109 RAPGEF6Q8TEU7 1601 aa10.57□□□□□ -0.72
RPA3-204ENST00000406109 CNKSR2Q8WXI2 1034 aa10.56□□□□□ -0.72
RPA3-204ENST00000406109 ARHGEF40Q8TER5 1519 aa10.56□□□□□ -0.72
RPA3-204ENST00000406109 FHOD3Q2V2M9 1422 aa10.56□□□□□ -0.72
RPA3-204ENST00000406109 RIMS1Q86UR5 1692 aaKnown RBP10.56□□□□□ -0.72
RPA3-204ENST00000406109 AKNAQ7Z591 1439 aa10.54□□□□□ -0.72
RPA3-204ENST00000406109 DENND4BO75064 1496 aaPredicted RBP10.54□□□□□ -0.72
RPA3-204ENST00000406109 FAM9AQ8IZU1 332 aaPredicted RBP10.53□□□□□ -0.72
RPA3-204ENST00000406109 YEATS2Q9ULM3 1422 aa10.52□□□□□ -0.73
RPA3-204ENST00000406109 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.52□□□□□ -0.73
RPA3-204ENST00000406109 HNRNPUL2Q1KMD3 747 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms