RNA–Protein interactions for RNA: ENST00000405885.6

IRF1-202, Transcript of interferon regulatory factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene IRF1, Length 2,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-202ENST00000405885 CTTNBP2Q8WZ74 1663 aa26.66■■□□□ 1.86
IRF1-202ENST00000405885 ARAP1Q96P48 1450 aa26.65■■□□□ 1.86
IRF1-202ENST00000405885 CHMP7Q8WUX9 453 aaPredicted RBP26.62■■□□□ 1.85
IRF1-202ENST00000405885 GRIN2AQ12879 1464 aa26.62■■□□□ 1.85
IRF1-202ENST00000405885 SYNJ2O15056 1496 aa26.61■■□□□ 1.85
IRF1-202ENST00000405885 P3H3Q8IVL6 736 aa26.59■■□□□ 1.85
IRF1-202ENST00000405885 VPS8Q8N3P4 1428 aa26.58■■□□□ 1.85
IRF1-202ENST00000405885 TTBK1Q5TCY1 1321 aaPredicted RBP26.49■■□□□ 1.83
IRF1-202ENST00000405885 FHOD3Q2V2M9 1422 aa26.48■■□□□ 1.83
IRF1-202ENST00000405885 CEP170Q5SW79 1584 aa26.48■■□□□ 1.83
IRF1-202ENST00000405885 IQGAP2Q13576 1575 aa26.48■■□□□ 1.83
IRF1-202ENST00000405885 KIAA0586Q9BVV6 1533 aa26.43■■□□□ 1.82
IRF1-202ENST00000405885 EFCAB5A4FU69 1503 aa26.42■■□□□ 1.82
IRF1-202ENST00000405885 NUP160Q12769 1436 aa26.41■■□□□ 1.82
IRF1-202ENST00000405885 SAMD9Q5K651 1589 aa26.4■■□□□ 1.82
IRF1-202ENST00000405885 PCGF6Q9BYE7 350 aa26.39■■□□□ 1.82
IRF1-202ENST00000405885 CHD1O14646 1710 aa26.39■■□□□ 1.81
IRF1-202ENST00000405885 UGGT2Q9NYU1 1516 aa26.32■■□□□ 1.8
IRF1-202ENST00000405885 APLP2Q06481 763 aa26.3■■□□□ 1.8
IRF1-202ENST00000405885 TRIM26Q12899 539 aaPredicted RBP26.29■■□□□ 1.8
IRF1-202ENST00000405885 DISP1Q96F81 1524 aa26.28■■□□□ 1.8
IRF1-202ENST00000405885 PCF11O94913 1555 aaKnown RBP26.27■■□□□ 1.8
IRF1-202ENST00000405885 JPH4Q96JJ6 628 aa26.27■■□□□ 1.8
IRF1-202ENST00000405885 ATP1B4Q9UN42 357 aaPredicted RBP26.27■■□□□ 1.8
IRF1-202ENST00000405885 KANK4Q5T7N3 995 aaPredicted RBP26.24■■□□□ 1.79
IRF1-202ENST00000405885 FMN1Q68DA7 1419 aa26.23■■□□□ 1.79
IRF1-202ENST00000405885 KIAA0556O60303 1618 aa26.22■■□□□ 1.79
IRF1-202ENST00000405885 CASKIN1Q8WXD9 1431 aa26.18■■□□□ 1.78
IRF1-202ENST00000405885 FYCO1Q9BQS8 1478 aa26.15■■□□□ 1.78
IRF1-202ENST00000405885 TIAM1Q13009 1591 aa26.11■■□□□ 1.77
IRF1-202ENST00000405885 PRG4Q92954 1404 aaPredicted RBP26.1■■□□□ 1.77
IRF1-202ENST00000405885 CARMIL2Q6F5E8 1435 aa26.08■■□□□ 1.77
IRF1-202ENST00000405885 ARID3CA6NKF2 412 aa26.07■■□□□ 1.76
IRF1-202ENST00000405885 LRRIQ1Q96JM4 1722 aa26.06■■□□□ 1.76
IRF1-202ENST00000405885 CLASP1Q7Z460 1538 aa26.06■■□□□ 1.76
IRF1-202ENST00000405885 SHROOM2Q13796 1616 aa26.03■■□□□ 1.76
IRF1-202ENST00000405885 MAP3K1Q13233 1512 aa26.03■■□□□ 1.76
IRF1-202ENST00000405885 ERCC6L2Q5T890 1561 aa26.02■■□□□ 1.76
IRF1-202ENST00000405885 CFAP43Q8NDM7 1665 aa26.02■■□□□ 1.76
IRF1-202ENST00000405885 LRRC9Q6ZRR7 1453 aa26.01■■□□□ 1.75
IRF1-202ENST00000405885 PLB1Q6P1J6 1458 aa26■■□□□ 1.75
IRF1-202ENST00000405885 HECW1Q76N89 1606 aa25.96■■□□□ 1.75
IRF1-202ENST00000405885 CDK13Q14004 1512 aaKnown RBP25.95■■□□□ 1.74
IRF1-202ENST00000405885 EPRSP07814 1512 aaKnown RBP25.94■■□□□ 1.74
IRF1-202ENST00000405885 NUP153P49790 1475 aaKnown RBP25.94■■□□□ 1.74
IRF1-202ENST00000405885 RAPGEF6Q8TEU7 1601 aa25.93■■□□□ 1.74
IRF1-202ENST00000405885 OSCARQ8IYS5 282 aa25.92■■□□□ 1.74
IRF1-202ENST00000405885 PTPRGP23470 1445 aa25.91■■□□□ 1.74
IRF1-202ENST00000405885 MAGI3Q5TCQ9 1506 aa25.89■■□□□ 1.73
IRF1-202ENST00000405885 CCDC18Q5T9S5 1454 aa25.88■■□□□ 1.73
IRF1-202ENST00000405885 MTUS2Q5JR59 1369 aa25.87■■□□□ 1.73
IRF1-202ENST00000405885 PHLDB1Q86UU1 1377 aa25.84■■□□□ 1.73
IRF1-202ENST00000405885 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.84■■□□□ 1.73
IRF1-202ENST00000405885 HNRNPUL2Q1KMD3 747 aaKnown RBP25.84■■□□□ 1.73
IRF1-202ENST00000405885 ABCA8O94911 1581 aa25.84■■□□□ 1.73
IRF1-202ENST00000405885 EHBP1L1Q8N3D4 1523 aa25.75■■□□□ 1.71
IRF1-202ENST00000405885 RRBP1Q9P2E9 1410 aaKnown RBP25.75■■□□□ 1.71
IRF1-202ENST00000405885 UACAQ9BZF9 1416 aa25.74■■□□□ 1.71
IRF1-202ENST00000405885 NCOA2Q15596 1464 aa25.73■■□□□ 1.71
IRF1-202ENST00000405885 ATP10BO94823 1461 aa25.72■■□□□ 1.71
IRF1-202ENST00000405885 CCNB3Q8WWL7 1395 aa25.71■■□□□ 1.71
IRF1-202ENST00000405885 SUPT6HQ7KZ85 1726 aaKnown RBP25.68■■□□□ 1.7
IRF1-202ENST00000405885 CDK11AQ9UQ88 783 aaPredicted RBP25.65■■□□□ 1.7
IRF1-202ENST00000405885 ARHGEF11O15085 1522 aa25.64■■□□□ 1.7
IRF1-202ENST00000405885 ABCC2Q92887 1545 aa25.64■■□□□ 1.7
IRF1-202ENST00000405885 ITGAEP38570 1179 aa25.64■■□□□ 1.69
IRF1-202ENST00000405885 FAM50AQ14320 339 aaKnown RBP25.62■■□□□ 1.69
IRF1-202ENST00000405885 TROQ12816 1431 aaPredicted RBP25.61■■□□□ 1.69
IRF1-202ENST00000405885 MYOM3Q5VTT5 1437 aa25.59■■□□□ 1.69
IRF1-202ENST00000405885 FGD6Q6ZV73 1430 aa25.59■■□□□ 1.69
IRF1-202ENST00000405885 PLEKHD1A6NEE1 506 aa25.58■■□□□ 1.69
IRF1-202ENST00000405885 KIF14Q15058 1648 aa25.57■■□□□ 1.68
IRF1-202ENST00000405885 ADCY10Q96PN6 1610 aa25.53■■□□□ 1.68
IRF1-202ENST00000405885 UHRF1BP1LA0JNW5 1464 aa25.53■■□□□ 1.68
IRF1-202ENST00000405885 ZCCHC11Q5TAX3 1644 aaKnown RBP25.49■■□□□ 1.67
IRF1-202ENST00000405885 KDM5BQ9UGL1 1544 aa25.49■■□□□ 1.67
IRF1-202ENST00000405885 PTPN23Q9H3S7 1636 aa25.46■■□□□ 1.67
IRF1-202ENST00000405885 ZNF644Q9H582 1327 aaPredicted RBP25.43■■□□□ 1.66
IRF1-202ENST00000405885 GPATCH8Q9UKJ3 1502 aaKnown RBP25.42■■□□□ 1.66
IRF1-202ENST00000405885 KCNH8Q96L42 1107 aa25.42■■□□□ 1.66
IRF1-202ENST00000405885 ABCC10Q5T3U5 1492 aa25.42■■□□□ 1.66
IRF1-202ENST00000405885 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.41■■□□□ 1.66
IRF1-202ENST00000405885 HRCP23327 699 aa25.4■■□□□ 1.66
IRF1-202ENST00000405885 MIA2Q96PC5 1412 aa25.39■■□□□ 1.66
IRF1-202ENST00000405885 PTPRKQ15262 1439 aa25.39■■□□□ 1.65
IRF1-202ENST00000405885 CFDP1Q9UEE9 299 aaPredicted RBP25.38■■□□□ 1.65
IRF1-202ENST00000405885 TCOF1Q13428 1488 aaKnown RBP25.37■■□□□ 1.65
IRF1-202ENST00000405885 CYB5RLQ6IPT4 315 aa25.36■■□□□ 1.65
IRF1-202ENST00000405885 RIMBP3CA6NJZ7 1639 aa25.36■■□□□ 1.65
IRF1-202ENST00000405885 RIMBP3BA6NNM3 1639 aa25.36■■□□□ 1.65
IRF1-202ENST00000405885 RIMBP3Q9UFD9 1639 aa25.36■■□□□ 1.65
IRF1-202ENST00000405885 ZNF777Q9ULD5 760 aaPredicted RBP25.35■■□□□ 1.65
IRF1-202ENST00000405885 CCER1Q8TC90 406 aaPredicted RBP25.33■■□□□ 1.65
IRF1-202ENST00000405885 TTC37Q6PGP7 1564 aa25.33■■□□□ 1.65
IRF1-202ENST00000405885 CDC42BPAQ5VT25 1732 aa25.33■■□□□ 1.65
IRF1-202ENST00000405885 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.33■■□□□ 1.64
IRF1-202ENST00000405885 ITSN2Q9NZM3 1697 aa25.31■■□□□ 1.64
IRF1-202ENST00000405885 CHIC2Q9UKJ5 165 aa25.28■■□□□ 1.64
IRF1-202ENST00000405885 CAMSAP2Q08AD1 1489 aa25.28■■□□□ 1.64
IRF1-202ENST00000405885 ASXL2Q76L83 1435 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms