RNA–Protein interactions for RNA: ENST00000405853.7

NR1H3-203, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-203ENST00000405853 ARAP1Q96P48 1450 aa23.61■■□□□ 1.37
NR1H3-203ENST00000405853 SNAPC4Q5SXM2 1469 aa23.51■■□□□ 1.35
NR1H3-203ENST00000405853 SAMD9Q5K651 1589 aa23.5■■□□□ 1.35
NR1H3-203ENST00000405853 SYNJ2O15056 1496 aa23.48■■□□□ 1.35
NR1H3-203ENST00000405853 IQGAP2Q13576 1575 aa23.46■■□□□ 1.35
NR1H3-203ENST00000405853 GRIN2AQ12879 1464 aa23.46■■□□□ 1.35
NR1H3-203ENST00000405853 PCGF6Q9BYE7 350 aa23.45■■□□□ 1.34
NR1H3-203ENST00000405853 MAP3K1Q13233 1512 aa23.44■■□□□ 1.34
NR1H3-203ENST00000405853 APLP2Q06481 763 aa23.43■■□□□ 1.34
NR1H3-203ENST00000405853 KIAA0586Q9BVV6 1533 aa23.4■■□□□ 1.34
NR1H3-203ENST00000405853 RANGAP1P46060 587 aaPredicted RBP23.4■■□□□ 1.34
NR1H3-203ENST00000405853 UGGT2Q9NYU1 1516 aa23.38■■□□□ 1.33
NR1H3-203ENST00000405853 FMN1Q68DA7 1419 aa23.37■■□□□ 1.33
NR1H3-203ENST00000405853 FYCO1Q9BQS8 1478 aa23.34■■□□□ 1.33
NR1H3-203ENST00000405853 NUP160Q12769 1436 aa23.32■■□□□ 1.32
NR1H3-203ENST00000405853 CFAP43Q8NDM7 1665 aa23.31■■□□□ 1.32
NR1H3-203ENST00000405853 CASKIN1Q8WXD9 1431 aa23.3■■□□□ 1.32
NR1H3-203ENST00000405853 PCF11O94913 1555 aaKnown RBP23.29■■□□□ 1.32
NR1H3-203ENST00000405853 TIAM1Q13009 1591 aa23.29■■□□□ 1.32
NR1H3-203ENST00000405853 FHOD3Q2V2M9 1422 aa23.29■■□□□ 1.32
NR1H3-203ENST00000405853 CHMP7Q8WUX9 453 aaPredicted RBP23.29■■□□□ 1.32
NR1H3-203ENST00000405853 CEP170Q5SW79 1584 aa23.27■■□□□ 1.32
NR1H3-203ENST00000405853 KIAA0556O60303 1618 aa23.22■■□□□ 1.31
NR1H3-203ENST00000405853 CHD1O14646 1710 aa23.21■■□□□ 1.31
NR1H3-203ENST00000405853 PPARGC1BQ86YN6 1023 aaKnown RBP23.19■■□□□ 1.3
NR1H3-203ENST00000405853 DISP1Q96F81 1524 aa23.16■■□□□ 1.3
NR1H3-203ENST00000405853 HECW1Q76N89 1606 aa23.14■■□□□ 1.3
NR1H3-203ENST00000405853 P3H3Q8IVL6 736 aa23.14■■□□□ 1.29
NR1H3-203ENST00000405853 LRRC9Q6ZRR7 1453 aa23.13■■□□□ 1.29
NR1H3-203ENST00000405853 CCDC18Q5T9S5 1454 aa23.13■■□□□ 1.29
NR1H3-203ENST00000405853 CARMIL2Q6F5E8 1435 aa23.11■■□□□ 1.29
NR1H3-203ENST00000405853 LRRIQ1Q96JM4 1722 aa23.09■■□□□ 1.29
NR1H3-203ENST00000405853 FBLN2P98095 1184 aa23.09■■□□□ 1.29
NR1H3-203ENST00000405853 KANK4Q5T7N3 995 aaPredicted RBP23.06■■□□□ 1.28
NR1H3-203ENST00000405853 SHROOM2Q13796 1616 aa23.06■■□□□ 1.28
NR1H3-203ENST00000405853 RRBP1Q9P2E9 1410 aaKnown RBP23.05■■□□□ 1.28
NR1H3-203ENST00000405853 JPH4Q96JJ6 628 aa23.03■■□□□ 1.28
NR1H3-203ENST00000405853 RAPGEF6Q8TEU7 1601 aa23.01■■□□□ 1.27
NR1H3-203ENST00000405853 EHBP1L1Q8N3D4 1523 aa23■■□□□ 1.27
NR1H3-203ENST00000405853 TTBK1Q5TCY1 1321 aaPredicted RBP22.98■■□□□ 1.27
NR1H3-203ENST00000405853 EPRSP07814 1512 aaKnown RBP22.97■■□□□ 1.27
NR1H3-203ENST00000405853 SUPT6HQ7KZ85 1726 aaKnown RBP22.96■■□□□ 1.27
NR1H3-203ENST00000405853 CLASP1Q7Z460 1538 aa22.95■■□□□ 1.26
NR1H3-203ENST00000405853 HRCP23327 699 aa22.94■■□□□ 1.26
NR1H3-203ENST00000405853 ATP1B4Q9UN42 357 aaPredicted RBP22.92■■□□□ 1.26
NR1H3-203ENST00000405853 MTUS2Q5JR59 1369 aa22.91■■□□□ 1.26
NR1H3-203ENST00000405853 CCNB3Q8WWL7 1395 aa22.9■■□□□ 1.26
NR1H3-203ENST00000405853 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.89■■□□□ 1.26
NR1H3-203ENST00000405853 PRG4Q92954 1404 aaPredicted RBP22.89■■□□□ 1.25
NR1H3-203ENST00000405853 ABCA8O94911 1581 aa22.88■■□□□ 1.25
NR1H3-203ENST00000405853 NUP153P49790 1475 aaKnown RBP22.88■■□□□ 1.25
NR1H3-203ENST00000405853 ARHGEF11O15085 1522 aa22.87■■□□□ 1.25
NR1H3-203ENST00000405853 ZEB1P37275 1124 aaPredicted RBP22.85■■□□□ 1.25
NR1H3-203ENST00000405853 PHLDB1Q86UU1 1377 aa22.83■■□□□ 1.24
NR1H3-203ENST00000405853 NCOA2Q15596 1464 aa22.81■■□□□ 1.24
NR1H3-203ENST00000405853 CDK11AQ9UQ88 783 aaPredicted RBP22.8■■□□□ 1.24
NR1H3-203ENST00000405853 CDK13Q14004 1512 aaKnown RBP22.8■■□□□ 1.24
NR1H3-203ENST00000405853 MAGI3Q5TCQ9 1506 aa22.8■■□□□ 1.24
NR1H3-203ENST00000405853 PLB1Q6P1J6 1458 aa22.78■■□□□ 1.24
NR1H3-203ENST00000405853 PTPRGP23470 1445 aa22.78■■□□□ 1.24
NR1H3-203ENST00000405853 MYOM3Q5VTT5 1437 aa22.77■■□□□ 1.24
NR1H3-203ENST00000405853 ADCY10Q96PN6 1610 aa22.77■■□□□ 1.24
NR1H3-203ENST00000405853 FGD6Q6ZV73 1430 aa22.75■■□□□ 1.23
NR1H3-203ENST00000405853 TROQ12816 1431 aaPredicted RBP22.72■■□□□ 1.23
NR1H3-203ENST00000405853 MIA2Q96PC5 1412 aa22.72■■□□□ 1.23
NR1H3-203ENST00000405853 UACAQ9BZF9 1416 aa22.69■■□□□ 1.22
NR1H3-203ENST00000405853 HNRNPUL2Q1KMD3 747 aaKnown RBP22.68■■□□□ 1.22
NR1H3-203ENST00000405853 ITSN2Q9NZM3 1697 aa22.67■■□□□ 1.22
NR1H3-203ENST00000405853 ABCC2Q92887 1545 aa22.67■■□□□ 1.22
NR1H3-203ENST00000405853 TCOF1Q13428 1488 aaKnown RBP22.67■■□□□ 1.22
NR1H3-203ENST00000405853 PTPN23Q9H3S7 1636 aa22.67■■□□□ 1.22
NR1H3-203ENST00000405853 UHRF1BP1LA0JNW5 1464 aa22.66■■□□□ 1.22
NR1H3-203ENST00000405853 ATP10BO94823 1461 aa22.66■■□□□ 1.22
NR1H3-203ENST00000405853 ERCC6L2Q5T890 1561 aa22.64■■□□□ 1.22
NR1H3-203ENST00000405853 KIF14Q15058 1648 aa22.61■■□□□ 1.21
NR1H3-203ENST00000405853 CCER1Q8TC90 406 aaPredicted RBP22.6■■□□□ 1.21
NR1H3-203ENST00000405853 OSCARQ8IYS5 282 aa22.59■■□□□ 1.21
NR1H3-203ENST00000405853 PLEKHD1A6NEE1 506 aa22.57■■□□□ 1.2
NR1H3-203ENST00000405853 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.57■■□□□ 1.2
NR1H3-203ENST00000405853 FAM50AQ14320 339 aaKnown RBP22.56■■□□□ 1.2
NR1H3-203ENST00000405853 CLSPNQ9HAW4 1339 aa22.54■■□□□ 1.2
NR1H3-203ENST00000405853 KDM5BQ9UGL1 1544 aa22.53■■□□□ 1.2
NR1H3-203ENST00000405853 SETD5Q9C0A6 1442 aa22.51■■□□□ 1.19
NR1H3-203ENST00000405853 CDC42BPAQ5VT25 1732 aa22.51■■□□□ 1.19
NR1H3-203ENST00000405853 ABCC10Q5T3U5 1492 aa22.51■■□□□ 1.19
NR1H3-203ENST00000405853 AKNAQ7Z591 1439 aa22.5■■□□□ 1.19
NR1H3-203ENST00000405853 ARID3CA6NKF2 412 aa22.49■■□□□ 1.19
NR1H3-203ENST00000405853 ZCCHC11Q5TAX3 1644 aaKnown RBP22.49■■□□□ 1.19
NR1H3-203ENST00000405853 GPATCH8Q9UKJ3 1502 aaKnown RBP22.48■■□□□ 1.19
NR1H3-203ENST00000405853 DNMT1P26358 1616 aaKnown RBP22.48■■□□□ 1.19
NR1H3-203ENST00000405853 HFM1A2PYH4 1435 aa22.44■■□□□ 1.18
NR1H3-203ENST00000405853 GCC2Q8IWJ2 1684 aa22.44■■□□□ 1.18
NR1H3-203ENST00000405853 ACIN1Q9UKV3 1341 aaKnown RBP22.44■■□□□ 1.18
NR1H3-203ENST00000405853 PREX2Q70Z35 1606 aa22.42■■□□□ 1.18
NR1H3-203ENST00000405853 RAB3GAP2Q9H2M9 1393 aa22.42■■□□□ 1.18
NR1H3-203ENST00000405853 ITGAEP38570 1179 aa22.41■■□□□ 1.18
NR1H3-203ENST00000405853 DHX57Q6P158 1386 aaKnown RBP22.4■■□□□ 1.18
NR1H3-203ENST00000405853 CAMSAP2Q08AD1 1489 aa22.39■■□□□ 1.17
NR1H3-203ENST00000405853 CROCC2H7BZ55 1655 aa22.38■■□□□ 1.17
NR1H3-203ENST00000405853 PTPRKQ15262 1439 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms