RNA–Protein interactions for RNA: ENST00000405655.7

PRAME-205, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-205ENST00000405655 PBRM1Q86U86 1689 aa21.64■■□□□ 1.05
PRAME-205ENST00000405655 FHOD3Q2V2M9 1422 aa21.6■■□□□ 1.05
PRAME-205ENST00000405655 CTTNBP2Q8WZ74 1663 aa21.6■■□□□ 1.05
PRAME-205ENST00000405655 THOC2Q8NI27 1593 aaKnown RBP21.6■■□□□ 1.05
PRAME-205ENST00000405655 HNRNPUL2Q1KMD3 747 aaKnown RBP21.6■■□□□ 1.05
PRAME-205ENST00000405655 ATP1B4Q9UN42 357 aaPredicted RBP21.59■■□□□ 1.05
PRAME-205ENST00000405655 IFT140Q96RY7 1462 aa21.53■■□□□ 1.04
PRAME-205ENST00000405655 EIF4G3O43432 1585 aaKnown RBP21.49■■□□□ 1.03
PRAME-205ENST00000405655 ADAMTS12P58397 1594 aa21.48■■□□□ 1.03
PRAME-205ENST00000405655 GRIN2BQ13224 1484 aa21.48■■□□□ 1.03
PRAME-205ENST00000405655 PCF11O94913 1555 aaKnown RBP21.48■■□□□ 1.03
PRAME-205ENST00000405655 CCER1Q8TC90 406 aaPredicted RBP21.46■■□□□ 1.03
PRAME-205ENST00000405655 FHAD1B1AJZ9 1412 aa21.45■■□□□ 1.02
PRAME-205ENST00000405655 SNAPC4Q5SXM2 1469 aa21.45■■□□□ 1.02
PRAME-205ENST00000405655 FBLN2P98095 1184 aa21.41■■□□□ 1.02
PRAME-205ENST00000405655 TIAM1Q13009 1591 aa21.39■■□□□ 1.02
PRAME-205ENST00000405655 EFCAB5A4FU69 1503 aa21.37■■□□□ 1.01
PRAME-205ENST00000405655 SAMD9Q5K651 1589 aa21.36■■□□□ 1.01
PRAME-205ENST00000405655 ITGAEP38570 1179 aa21.36■■□□□ 1.01
PRAME-205ENST00000405655 ARID3CA6NKF2 412 aa21.34■■□□□ 1.01
PRAME-205ENST00000405655 LRRIQ1Q96JM4 1722 aa21.34■■□□□ 1.01
PRAME-205ENST00000405655 LRRC9Q6ZRR7 1453 aa21.31■■□□□ 1
PRAME-205ENST00000405655 IQGAP2Q13576 1575 aa21.31■■□□□ 1
PRAME-205ENST00000405655 CHMP7Q8WUX9 453 aaPredicted RBP21.29■■□□□ 1
PRAME-205ENST00000405655 CASKIN1Q8WXD9 1431 aa21.29■■□□□ 1
PRAME-205ENST00000405655 GRIN2AQ12879 1464 aa21.28■■□□□ 1
PRAME-205ENST00000405655 CFAP43Q8NDM7 1665 aa21.28■■□□□ 1
PRAME-205ENST00000405655 ZEB1P37275 1124 aaPredicted RBP21.28■■□□□ 1
PRAME-205ENST00000405655 PHLDB1Q86UU1 1377 aa21.28■■□□□ 1
PRAME-205ENST00000405655 FYCO1Q9BQS8 1478 aa21.26■□□□□ 0.99
PRAME-205ENST00000405655 FMN1Q68DA7 1419 aa21.24■□□□□ 0.99
PRAME-205ENST00000405655 CEP170Q5SW79 1584 aa21.23■□□□□ 0.99
PRAME-205ENST00000405655 RRBP1Q9P2E9 1410 aaKnown RBP21.23■□□□□ 0.99
PRAME-205ENST00000405655 MAP3K1Q13233 1512 aa21.21■□□□□ 0.99
PRAME-205ENST00000405655 CCNB3Q8WWL7 1395 aa21.21■□□□□ 0.99
PRAME-205ENST00000405655 MAGI1Q96QZ7 1491 aaPredicted RBP21.19■□□□□ 0.98
PRAME-205ENST00000405655 SYNJ2O15056 1496 aa21.19■□□□□ 0.98
PRAME-205ENST00000405655 FAM50AQ14320 339 aaKnown RBP21.17■□□□□ 0.98
PRAME-205ENST00000405655 KIAA0586Q9BVV6 1533 aa21.17■□□□□ 0.98
PRAME-205ENST00000405655 DISP1Q96F81 1524 aa21.17■□□□□ 0.98
PRAME-205ENST00000405655 UGGT2Q9NYU1 1516 aa21.14■□□□□ 0.98
PRAME-205ENST00000405655 MAGI3Q5TCQ9 1506 aa21.13■□□□□ 0.97
PRAME-205ENST00000405655 CDK13Q14004 1512 aaKnown RBP21.13■□□□□ 0.97
PRAME-205ENST00000405655 MTUS2Q5JR59 1369 aa21.11■□□□□ 0.97
PRAME-205ENST00000405655 KIAA0556O60303 1618 aa21.11■□□□□ 0.97
PRAME-205ENST00000405655 JPH4Q96JJ6 628 aa21.07■□□□□ 0.96
PRAME-205ENST00000405655 NUP160Q12769 1436 aa21.04■□□□□ 0.96
PRAME-205ENST00000405655 EPRSP07814 1512 aaKnown RBP21.04■□□□□ 0.96
PRAME-205ENST00000405655 CHD1O14646 1710 aa21.04■□□□□ 0.96
PRAME-205ENST00000405655 NCOA2Q15596 1464 aa21.02■□□□□ 0.96
PRAME-205ENST00000405655 HECW1Q76N89 1606 aa21.01■□□□□ 0.95
PRAME-205ENST00000405655 PLB1Q6P1J6 1458 aa21■□□□□ 0.95
PRAME-205ENST00000405655 DHX57Q6P158 1386 aaKnown RBP20.98■□□□□ 0.95
PRAME-205ENST00000405655 NUP153P49790 1475 aaKnown RBP20.97■□□□□ 0.95
PRAME-205ENST00000405655 FGD6Q6ZV73 1430 aa20.97■□□□□ 0.95
PRAME-205ENST00000405655 RAB3GAP2Q9H2M9 1393 aa20.95■□□□□ 0.94
PRAME-205ENST00000405655 SUPT6HQ7KZ85 1726 aaKnown RBP20.95■□□□□ 0.94
PRAME-205ENST00000405655 RAPGEF6Q8TEU7 1601 aa20.95■□□□□ 0.94
PRAME-205ENST00000405655 CCDC18Q5T9S5 1454 aa20.93■□□□□ 0.94
PRAME-205ENST00000405655 EHBP1L1Q8N3D4 1523 aa20.93■□□□□ 0.94
PRAME-205ENST00000405655 PTPRKQ15262 1439 aa20.93■□□□□ 0.94
PRAME-205ENST00000405655 MYOM3Q5VTT5 1437 aa20.9■□□□□ 0.94
PRAME-205ENST00000405655 PRG4Q92954 1404 aaPredicted RBP20.89■□□□□ 0.93
PRAME-205ENST00000405655 ERCC6L2Q5T890 1561 aa20.87■□□□□ 0.93
PRAME-205ENST00000405655 CARMIL2Q6F5E8 1435 aa20.86■□□□□ 0.93
PRAME-205ENST00000405655 ARHGEF11O15085 1522 aa20.86■□□□□ 0.93
PRAME-205ENST00000405655 CHIC2Q9UKJ5 165 aa20.86■□□□□ 0.93
PRAME-205ENST00000405655 SETD5Q9C0A6 1442 aa20.86■□□□□ 0.93
PRAME-205ENST00000405655 PTPN23Q9H3S7 1636 aa20.84■□□□□ 0.93
PRAME-205ENST00000405655 ZNF644Q9H582 1327 aaPredicted RBP20.83■□□□□ 0.93
PRAME-205ENST00000405655 RRP7BPQ9NSQ0 103 aa20.79■□□□□ 0.92
PRAME-205ENST00000405655 KIF14Q15058 1648 aa20.78■□□□□ 0.92
PRAME-205ENST00000405655 ABCA8O94911 1581 aa20.76■□□□□ 0.91
PRAME-205ENST00000405655 MAPKBP1O60336 1514 aa20.76■□□□□ 0.91
PRAME-205ENST00000405655 PTPRGP23470 1445 aa20.75■□□□□ 0.91
PRAME-205ENST00000405655 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.75■□□□□ 0.913e-13■■■■■ 30.1
PRAME-205ENST00000405655 SIN3AQ96ST3 1273 aa20.75■□□□□ 0.91
PRAME-205ENST00000405655 ATP10BO94823 1461 aa20.74■□□□□ 0.91
PRAME-205ENST00000405655 ZNF777Q9ULD5 760 aaPredicted RBP20.71■□□□□ 0.91
PRAME-205ENST00000405655 CDK11AQ9UQ88 783 aaPredicted RBP20.7■□□□□ 0.9
PRAME-205ENST00000405655 SHROOM2Q13796 1616 aa20.7■□□□□ 0.9
PRAME-205ENST00000405655 TROQ12816 1431 aaPredicted RBP20.7■□□□□ 0.9
PRAME-205ENST00000405655 NEUROD1Q13562 356 aa20.69■□□□□ 0.9
PRAME-205ENST00000405655 TCOF1Q13428 1488 aaKnown RBP20.68■□□□□ 0.9
PRAME-205ENST00000405655 KDM6BO15054 1643 aa20.68■□□□□ 0.9
PRAME-205ENST00000405655 NAIPQ13075 1403 aa20.68■□□□□ 0.9
PRAME-205ENST00000405655 PLEKHD1A6NEE1 506 aa20.65■□□□□ 0.9
PRAME-205ENST00000405655 HFM1A2PYH4 1435 aa20.64■□□□□ 0.89
PRAME-205ENST00000405655 ZNF316A6NFI3 1004 aaPredicted RBP20.63■□□□□ 0.89
PRAME-205ENST00000405655 CLASP1Q7Z460 1538 aa20.63■□□□□ 0.89
PRAME-205ENST00000405655 CFDP1Q9UEE9 299 aaPredicted RBP20.63■□□□□ 0.89
PRAME-205ENST00000405655 GPATCH8Q9UKJ3 1502 aaKnown RBP20.62■□□□□ 0.89
PRAME-205ENST00000405655 MIA2Q96PC5 1412 aa20.62■□□□□ 0.89
PRAME-205ENST00000405655 CLSPNQ9HAW4 1339 aa20.62■□□□□ 0.89
PRAME-205ENST00000405655 ABCC5O15440 1437 aa20.59■□□□□ 0.89
PRAME-205ENST00000405655 DIEXFQ68CQ4 756 aaKnown RBP20.59■□□□□ 0.89
PRAME-205ENST00000405655 UACAQ9BZF9 1416 aa20.59■□□□□ 0.89
PRAME-205ENST00000405655 DAPK1P53355 1430 aa20.58■□□□□ 0.89
PRAME-205ENST00000405655 CDC42BPAQ5VT25 1732 aa20.58■□□□□ 0.89
PRAME-205ENST00000405655 ADCY10Q96PN6 1610 aa20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms