RNA–Protein interactions for RNA: ENST00000405506.2

XRCC6-204, Transcript of X-ray repair cross complementing 6, humanhuman

TSL 5 BASIC

Gene XRCC6, Length 1,958 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6-204ENST00000405506 EIF4G3O43432 1585 aaKnown RBP16.04■□□□□ 0.16
XRCC6-204ENST00000405506 ADAMTS12P58397 1594 aa16.03■□□□□ 0.16
XRCC6-204ENST00000405506 GRIN2BQ13224 1484 aa16.02■□□□□ 0.16
XRCC6-204ENST00000405506 FHAD1B1AJZ9 1412 aa15.98■□□□□ 0.15
XRCC6-204ENST00000405506 TTBK1Q5TCY1 1321 aaPredicted RBP15.98■□□□□ 0.15
XRCC6-204ENST00000405506 SNAPC4Q5SXM2 1469 aa15.95■□□□□ 0.14
XRCC6-204ENST00000405506 EFCAB5A4FU69 1503 aa15.9■□□□□ 0.14
XRCC6-204ENST00000405506 P3H3Q8IVL6 736 aa15.89■□□□□ 0.13
XRCC6-204ENST00000405506 SAMD9Q5K651 1589 aa15.89■□□□□ 0.13
XRCC6-204ENST00000405506 FHOD3Q2V2M9 1422 aa15.88■□□□□ 0.13
XRCC6-204ENST00000405506 MAGI1Q96QZ7 1491 aaPredicted RBP15.86■□□□□ 0.13
XRCC6-204ENST00000405506 GRIN2AQ12879 1464 aa15.85■□□□□ 0.13
XRCC6-204ENST00000405506 PCF11O94913 1555 aaKnown RBP15.85■□□□□ 0.13
XRCC6-204ENST00000405506 IQGAP2Q13576 1575 aa15.85■□□□□ 0.13
XRCC6-204ENST00000405506 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.84■□□□□ 0.13
XRCC6-204ENST00000405506 APLP2Q06481 763 aa15.84■□□□□ 0.13
XRCC6-204ENST00000405506 CCER1Q8TC90 406 aaPredicted RBP15.82■□□□□ 0.12
XRCC6-204ENST00000405506 KANK4Q5T7N3 995 aaPredicted RBP15.82■□□□□ 0.12
XRCC6-204ENST00000405506 SYNJ2O15056 1496 aa15.81■□□□□ 0.12
XRCC6-204ENST00000405506 CEP170Q5SW79 1584 aa15.8■□□□□ 0.12
XRCC6-204ENST00000405506 TIAM1Q13009 1591 aa15.79■□□□□ 0.12
XRCC6-204ENST00000405506 CFAP43Q8NDM7 1665 aa15.78■□□□□ 0.12
XRCC6-204ENST00000405506 KIAA0586Q9BVV6 1533 aa15.77■□□□□ 0.12
XRCC6-204ENST00000405506 UGGT2Q9NYU1 1516 aa15.77■□□□□ 0.11
XRCC6-204ENST00000405506 LRRIQ1Q96JM4 1722 aa15.77■□□□□ 0.11
XRCC6-204ENST00000405506 MAP3K1Q13233 1512 aa15.76■□□□□ 0.11
XRCC6-204ENST00000405506 FYCO1Q9BQS8 1478 aa15.75■□□□□ 0.11
XRCC6-204ENST00000405506 CHMP7Q8WUX9 453 aaPredicted RBP15.75■□□□□ 0.11
XRCC6-204ENST00000405506 CASKIN1Q8WXD9 1431 aa15.75■□□□□ 0.11
XRCC6-204ENST00000405506 FMN1Q68DA7 1419 aa15.73■□□□□ 0.11
XRCC6-204ENST00000405506 FBLN2P98095 1184 aa15.73■□□□□ 0.11
XRCC6-204ENST00000405506 NUP160Q12769 1436 aa15.72■□□□□ 0.11
XRCC6-204ENST00000405506 CHD1O14646 1710 aa15.72■□□□□ 0.11
XRCC6-204ENST00000405506 DISP1Q96F81 1524 aa15.71■□□□□ 0.11
XRCC6-204ENST00000405506 KIAA0556O60303 1618 aa15.71■□□□□ 0.11
XRCC6-204ENST00000405506 LRRC9Q6ZRR7 1453 aa15.7■□□□□ 0.1
XRCC6-204ENST00000405506 ATP1B4Q9UN42 357 aaPredicted RBP15.69■□□□□ 0.1
XRCC6-204ENST00000405506 RRBP1Q9P2E9 1410 aaKnown RBP15.62■□□□□ 0.09
XRCC6-204ENST00000405506 HECW1Q76N89 1606 aa15.61■□□□□ 0.09
XRCC6-204ENST00000405506 HNRNPUL2Q1KMD3 747 aaKnown RBP15.59■□□□□ 0.09
XRCC6-204ENST00000405506 JPH4Q96JJ6 628 aa15.59■□□□□ 0.09
XRCC6-204ENST00000405506 PHLDB1Q86UU1 1377 aa15.59■□□□□ 0.09
XRCC6-204ENST00000405506 MAGI3Q5TCQ9 1506 aa15.58■□□□□ 0.09
XRCC6-204ENST00000405506 CDK13Q14004 1512 aaKnown RBP15.57■□□□□ 0.08
XRCC6-204ENST00000405506 RAPGEF6Q8TEU7 1601 aa15.57■□□□□ 0.08
XRCC6-204ENST00000405506 EPRSP07814 1512 aaKnown RBP15.56■□□□□ 0.08
XRCC6-204ENST00000405506 CCDC18Q5T9S5 1454 aa15.55■□□□□ 0.08
XRCC6-204ENST00000405506 CCNB3Q8WWL7 1395 aa15.55■□□□□ 0.08
XRCC6-204ENST00000405506 SHROOM2Q13796 1616 aa15.54■□□□□ 0.08
XRCC6-204ENST00000405506 DIEXFQ68CQ4 756 aaKnown RBP15.53■□□□□ 0.08
XRCC6-204ENST00000405506 NUP153P49790 1475 aaKnown RBP15.53■□□□□ 0.08
XRCC6-204ENST00000405506 CARMIL2Q6F5E8 1435 aa15.53■□□□□ 0.08
XRCC6-204ENST00000405506 EHBP1L1Q8N3D4 1523 aa15.52■□□□□ 0.08
XRCC6-204ENST00000405506 MTUS2Q5JR59 1369 aa15.52■□□□□ 0.08
XRCC6-204ENST00000405506 PLB1Q6P1J6 1458 aa15.51■□□□□ 0.07
XRCC6-204ENST00000405506 ARID3CA6NKF2 412 aa15.51■□□□□ 0.07
XRCC6-204ENST00000405506 SUPT6HQ7KZ85 1726 aaKnown RBP15.51■□□□□ 0.07
XRCC6-204ENST00000405506 CLSPNQ9HAW4 1339 aa15.51■□□□□ 0.07
XRCC6-204ENST00000405506 PRG4Q92954 1404 aaPredicted RBP15.5■□□□□ 0.07
XRCC6-204ENST00000405506 ZNF316A6NFI3 1004 aaPredicted RBP15.5■□□□□ 0.07
XRCC6-204ENST00000405506 NCOA2Q15596 1464 aa15.49■□□□□ 0.07
XRCC6-204ENST00000405506 CLASP1Q7Z460 1538 aa15.49■□□□□ 0.07
XRCC6-204ENST00000405506 ARHGEF11O15085 1522 aa15.48■□□□□ 0.07
XRCC6-204ENST00000405506 ERCC6L2Q5T890 1561 aa15.48■□□□□ 0.07
XRCC6-204ENST00000405506 ABCA8O94911 1581 aa15.47■□□□□ 0.07
XRCC6-204ENST00000405506 SCAF1Q9H7N4 1312 aaKnown RBP15.45■□□□□ 0.06
XRCC6-204ENST00000405506 FGD6Q6ZV73 1430 aa15.44■□□□□ 0.06
XRCC6-204ENST00000405506 ITGAEP38570 1179 aa15.42■□□□□ 0.06
XRCC6-204ENST00000405506 MYOM3Q5VTT5 1437 aa15.42■□□□□ 0.06
XRCC6-204ENST00000405506 ACIN1Q9UKV3 1341 aaKnown RBP15.41■□□□□ 0.06
XRCC6-204ENST00000405506 FAM50AQ14320 339 aaKnown RBP15.4■□□□□ 0.06
XRCC6-204ENST00000405506 PTPRGP23470 1445 aa15.39■□□□□ 0.05
XRCC6-204ENST00000405506 DHX57Q6P158 1386 aaKnown RBP15.38■□□□□ 0.05
XRCC6-204ENST00000405506 PTPN23Q9H3S7 1636 aa15.38■□□□□ 0.05
XRCC6-204ENST00000405506 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.38■□□□□ 0.05
XRCC6-204ENST00000405506 ATP10BO94823 1461 aa15.37■□□□□ 0.05
XRCC6-204ENST00000405506 KIF14Q15058 1648 aa15.35■□□□□ 0.05
XRCC6-204ENST00000405506 ADCY10Q96PN6 1610 aa15.35■□□□□ 0.05
XRCC6-204ENST00000405506 TROQ12816 1431 aaPredicted RBP15.35■□□□□ 0.05
XRCC6-204ENST00000405506 TCOF1Q13428 1488 aaKnown RBP15.33■□□□□ 0.04
XRCC6-204ENST00000405506 PTPRKQ15262 1439 aa15.32■□□□□ 0.04
XRCC6-204ENST00000405506 NEUROD1Q13562 356 aa15.32■□□□□ 0.04
XRCC6-204ENST00000405506 UACAQ9BZF9 1416 aa15.32■□□□□ 0.04
XRCC6-204ENST00000405506 CENPBP07199 599 aaPredicted RBP15.31■□□□□ 0.04
XRCC6-204ENST00000405506 CDK11AQ9UQ88 783 aaPredicted RBP15.3■□□□□ 0.04
XRCC6-204ENST00000405506 RAB3GAP2Q9H2M9 1393 aa15.29■□□□□ 0.04
XRCC6-204ENST00000405506 MIA2Q96PC5 1412 aa15.29■□□□□ 0.04
XRCC6-204ENST00000405506 ABCC2Q92887 1545 aa15.29■□□□□ 0.04
XRCC6-204ENST00000405506 SETD5Q9C0A6 1442 aa15.28■□□□□ 0.04
XRCC6-204ENST00000405506 ITSN2Q9NZM3 1697 aa15.26■□□□□ 0.03
XRCC6-204ENST00000405506 CDC42BPAQ5VT25 1732 aa15.26■□□□□ 0.03
XRCC6-204ENST00000405506 ABCC10Q5T3U5 1492 aa15.25■□□□□ 0.03
XRCC6-204ENST00000405506 GPATCH8Q9UKJ3 1502 aaKnown RBP15.25■□□□□ 0.03
XRCC6-204ENST00000405506 PLEKHD1A6NEE1 506 aa15.24■□□□□ 0.03
XRCC6-204ENST00000405506 ZCCHC11Q5TAX3 1644 aaKnown RBP15.23■□□□□ 0.03
XRCC6-204ENST00000405506 ZNF644Q9H582 1327 aaPredicted RBP15.23■□□□□ 0.03
XRCC6-204ENST00000405506 UHRF1BP1LA0JNW5 1464 aa15.21■□□□□ 0.03
XRCC6-204ENST00000405506 PELP1Q8IZL8 1130 aaKnown RBP15.21■□□□□ 0.03
XRCC6-204ENST00000405506 DNMT1P26358 1616 aaKnown RBP15.21■□□□□ 0.02
XRCC6-204ENST00000405506 OSCARQ8IYS5 282 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms