RNA–Protein interactions for RNA: ENST00000405489.7

ATRAID-202, Transcript of all-trans retinoic acid induced differentiation factor, humanhuman

TSL 1 (best) BASIC

Gene ATRAID, Length 1,059 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRAID-202ENST00000405489 JPH4Q96JJ6 628 aa22.55■■□□□ 1.2
ATRAID-202ENST00000405489 KIAA0586Q9BVV6 1533 aa22.53■■□□□ 1.2
ATRAID-202ENST00000405489 PRG4Q92954 1404 aaPredicted RBP22.51■■□□□ 1.19
ATRAID-202ENST00000405489 RAPGEF2Q9Y4G8 1499 aa22.45■■□□□ 1.18
ATRAID-202ENST00000405489 IQGAP2Q13576 1575 aa22.38■■□□□ 1.17
ATRAID-202ENST00000405489 TRHP20396 242 aaPredicted RBP22.33■■□□□ 1.17
ATRAID-202ENST00000405489 PRXQ9BXM0 1461 aa22.33■■□□□ 1.16
ATRAID-202ENST00000405489 CTTNBP2Q8WZ74 1663 aa22.33■■□□□ 1.16
ATRAID-202ENST00000405489 CARMIL2Q6F5E8 1435 aa22.29■■□□□ 1.16
ATRAID-202ENST00000405489 UGGT2Q9NYU1 1516 aa22.26■■□□□ 1.15
ATRAID-202ENST00000405489 CSRNP3Q8WYN3 585 aa22.26■■□□□ 1.15
ATRAID-202ENST00000405489 EEA1Q15075 1411 aa22.25■■□□□ 1.15
ATRAID-202ENST00000405489 DISP1Q96F81 1524 aa22.23■■□□□ 1.15
ATRAID-202ENST00000405489 ADCY10Q96PN6 1610 aa22.23■■□□□ 1.15
ATRAID-202ENST00000405489 TNIKQ9UKE5 1360 aa22.22■■□□□ 1.15
ATRAID-202ENST00000405489 PTPRGP23470 1445 aa22.22■■□□□ 1.15
ATRAID-202ENST00000405489 CHIC1Q5VXU3 224 aa22.2■■□□□ 1.14
ATRAID-202ENST00000405489 KIAA0556O60303 1618 aa22.17■■□□□ 1.14
ATRAID-202ENST00000405489 NPM1P06748 294 aaKnown RBP eCLIP22.16■■□□□ 1.14
ATRAID-202ENST00000405489 KIF13AQ9H1H9 1805 aa22.15■■□□□ 1.14
ATRAID-202ENST00000405489 MAPKBP1O60336 1514 aa22.13■■□□□ 1.13
ATRAID-202ENST00000405489 GOLGA3Q08378 1498 aa22.12■■□□□ 1.13
ATRAID-202ENST00000405489 TTBK1Q5TCY1 1321 aaPredicted RBP22.09■■□□□ 1.13
ATRAID-202ENST00000405489 UHRF1BP1LA0JNW5 1464 aa22.09■■□□□ 1.13
ATRAID-202ENST00000405489 UACAQ9BZF9 1416 aa22.07■■□□□ 1.12
ATRAID-202ENST00000405489 FAM9AQ8IZU1 332 aaPredicted RBP22.07■■□□□ 1.12
ATRAID-202ENST00000405489 KIF21BO75037 1637 aa22.06■■□□□ 1.12
ATRAID-202ENST00000405489 ABCC2Q92887 1545 aa22.06■■□□□ 1.12
ATRAID-202ENST00000405489 ABCC10Q5T3U5 1492 aa22.03■■□□□ 1.12
ATRAID-202ENST00000405489 AEBP2Q6ZN18 517 aaPredicted RBP22.03■■□□□ 1.12
ATRAID-202ENST00000405489 DIP2BQ9P265 1576 aa22■■□□□ 1.11
ATRAID-202ENST00000405489 KDM5BQ9UGL1 1544 aa21.99■■□□□ 1.11
ATRAID-202ENST00000405489 SAMD9Q5K651 1589 aa21.98■■□□□ 1.11
ATRAID-202ENST00000405489 FAM69CQ0P6D2 419 aa21.96■■□□□ 1.11
ATRAID-202ENST00000405489 ABCA8O94911 1581 aa21.95■■□□□ 1.11
ATRAID-202ENST00000405489 ZCCHC11Q5TAX3 1644 aaKnown RBP21.95■■□□□ 1.1
ATRAID-202ENST00000405489 PLB1Q6P1J6 1458 aa21.94■■□□□ 1.1
ATRAID-202ENST00000405489 ASXL2Q76L83 1435 aa21.92■■□□□ 1.1
ATRAID-202ENST00000405489 P3H3Q8IVL6 736 aa21.89■■□□□ 1.09
ATRAID-202ENST00000405489 TSPOAP1O95153 1857 aa21.89■■□□□ 1.09
ATRAID-202ENST00000405489 GLI2P10070 1586 aa21.87■■□□□ 1.09
ATRAID-202ENST00000405489 EFCAB5A4FU69 1503 aa21.84■■□□□ 1.09
ATRAID-202ENST00000405489 UBTFP17480 764 aaKnown RBP21.82■■□□□ 1.08
ATRAID-202ENST00000405489 EPRSP07814 1512 aaKnown RBP21.8■■□□□ 1.08
ATRAID-202ENST00000405489 RAPGEF6Q8TEU7 1601 aa21.8■■□□□ 1.08
ATRAID-202ENST00000405489 RANGAP1P46060 587 aaPredicted RBP21.8■■□□□ 1.08
ATRAID-202ENST00000405489 WDR7Q9Y4E6 1490 aa21.79■■□□□ 1.08
ATRAID-202ENST00000405489 MAP3K4Q9Y6R4 1608 aa21.78■■□□□ 1.08
ATRAID-202ENST00000405489 PPRC1Q5VV67 1664 aaKnown RBP21.77■■□□□ 1.08
ATRAID-202ENST00000405489 FHOD3Q2V2M9 1422 aa21.76■■□□□ 1.07
ATRAID-202ENST00000405489 EHMT2Q96KQ7 1210 aa21.76■■□□□ 1.07
ATRAID-202ENST00000405489 ATP10BO94823 1461 aa21.75■■□□□ 1.07
ATRAID-202ENST00000405489 KDM6BO15054 1643 aa21.7■■□□□ 1.06
ATRAID-202ENST00000405489 CFAP43Q8NDM7 1665 aa21.7■■□□□ 1.06
ATRAID-202ENST00000405489 NUP153P49790 1475 aaKnown RBP21.69■■□□□ 1.06
ATRAID-202ENST00000405489 ARHGAP35Q9NRY4 1499 aa21.67■■□□□ 1.06
ATRAID-202ENST00000405489 ARID3CA6NKF2 412 aa21.66■■□□□ 1.06
ATRAID-202ENST00000405489 KCNH8Q96L42 1107 aa21.66■■□□□ 1.06
ATRAID-202ENST00000405489 TEX14Q8IWB6 1497 aa21.64■■□□□ 1.06
ATRAID-202ENST00000405489 FMN1Q68DA7 1419 aa21.62■■□□□ 1.05
ATRAID-202ENST00000405489 CD109Q6YHK3 1445 aa21.61■■□□□ 1.05
ATRAID-202ENST00000405489 MAGI3Q5TCQ9 1506 aa21.6■■□□□ 1.05
ATRAID-202ENST00000405489 ABCA9Q8IUA7 1624 aa21.59■■□□□ 1.05
ATRAID-202ENST00000405489 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.59■■□□□ 1.05
ATRAID-202ENST00000405489 HNRNPUL2Q1KMD3 747 aaKnown RBP21.59■■□□□ 1.05
ATRAID-202ENST00000405489 HECW1Q76N89 1606 aa21.55■■□□□ 1.04
ATRAID-202ENST00000405489 PLEKHD1A6NEE1 506 aa21.54■■□□□ 1.04
ATRAID-202ENST00000405489 COL17A1Q9UMD9 1497 aaPredicted RBP21.52■■□□□ 1.04
ATRAID-202ENST00000405489 CDK13Q14004 1512 aaKnown RBP21.5■■□□□ 1.03
ATRAID-202ENST00000405489 LRRIQ1Q96JM4 1722 aa21.5■■□□□ 1.03
ATRAID-202ENST00000405489 ATP1B4Q9UN42 357 aaPredicted RBP21.46■■□□□ 1.03
ATRAID-202ENST00000405489 CLIP1P30622 1438 aa21.46■■□□□ 1.03
ATRAID-202ENST00000405489 PHLDB1Q86UU1 1377 aa21.45■■□□□ 1.02
ATRAID-202ENST00000405489 ARAP3Q8WWN8 1544 aa21.44■■□□□ 1.02
ATRAID-202ENST00000405489 CASKIN1Q8WXD9 1431 aa21.43■■□□□ 1.02
ATRAID-202ENST00000405489 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.43■■□□□ 1.02
ATRAID-202ENST00000405489 CDK11AQ9UQ88 783 aaPredicted RBP21.42■■□□□ 1.02
ATRAID-202ENST00000405489 PCF11O94913 1555 aaKnown RBP21.41■■□□□ 1.02
ATRAID-202ENST00000405489 NEO1Q92859 1461 aa21.41■■□□□ 1.02
ATRAID-202ENST00000405489 TTC37Q6PGP7 1564 aa21.4■■□□□ 1.02
ATRAID-202ENST00000405489 FYCO1Q9BQS8 1478 aa21.38■■□□□ 1.01
ATRAID-202ENST00000405489 CCDC18Q5T9S5 1454 aa21.37■■□□□ 1.01
ATRAID-202ENST00000405489 CFAP74Q9C0B2 1584 aa21.36■■□□□ 1.01
ATRAID-202ENST00000405489 TROQ12816 1431 aaPredicted RBP21.34■■□□□ 1.01
ATRAID-202ENST00000405489 MYO5CQ9NQX4 1742 aa21.34■■□□□ 1.01
ATRAID-202ENST00000405489 KIF14Q15058 1648 aa21.33■■□□□ 1
ATRAID-202ENST00000405489 CEP162Q5TB80 1403 aa21.32■■□□□ 1
ATRAID-202ENST00000405489 FANCAO15360 1455 aa21.32■■□□□ 1
ATRAID-202ENST00000405489 PLCH2O75038 1416 aa21.3■■□□□ 1
ATRAID-202ENST00000405489 AKNAQ7Z591 1439 aa21.29■■□□□ 1
ATRAID-202ENST00000405489 LOC105371045A0A1W2PR82 267 aa21.28■■□□□ 1
ATRAID-202ENST00000405489 RICTORQ6R327 1708 aa21.28■■□□□ 1
ATRAID-202ENST00000405489 KDM4FA0A1W2PPD8 638 aa21.26■□□□□ 0.99
ATRAID-202ENST00000405489 RAPGEF3O95398 923 aa21.26■□□□□ 0.99
ATRAID-202ENST00000405489 FRMPD1Q5SYB0 1578 aa21.26■□□□□ 0.99
ATRAID-202ENST00000405489 CDC42BPBQ9Y5S2 1711 aa21.24■□□□□ 0.99
ATRAID-202ENST00000405489 DENND4BO75064 1496 aaPredicted RBP21.23■□□□□ 0.99
ATRAID-202ENST00000405489 EFCAB2Q5VUJ9 269 aa21.22■□□□□ 0.99
ATRAID-202ENST00000405489 CDC42BPAQ5VT25 1732 aa21.2■□□□□ 0.98
ATRAID-202ENST00000405489 ADGRL1O94910 1474 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms