RNA–Protein interactions for RNA: ENST00000403441.1

PRAME-204, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-204ENST00000403441 KIF13AQ9H1H9 1805 aa21.68■■□□□ 1.06
PRAME-204ENST00000403441 CUL7Q14999 1698 aa21.67■■□□□ 1.06
PRAME-204ENST00000403441 KIF27Q86VH2 1401 aa21.67■■□□□ 1.06
PRAME-204ENST00000403441 NPM1P06748 294 aaKnown RBP eCLIP21.64■■□□□ 1.05
PRAME-204ENST00000403441 KIAA0586Q9BVV6 1533 aa21.64■■□□□ 1.05
PRAME-204ENST00000403441 IGF1RP08069 1367 aa21.63■■□□□ 1.05
PRAME-204ENST00000403441 MAPKBP1O60336 1514 aa21.6■■□□□ 1.05
PRAME-204ENST00000403441 ADCY10Q96PN6 1610 aa21.59■■□□□ 1.05
PRAME-204ENST00000403441 ABCC10Q5T3U5 1492 aa21.58■■□□□ 1.05
PRAME-204ENST00000403441 FAM69CQ0P6D2 419 aa21.57■■□□□ 1.04
PRAME-204ENST00000403441 DIP2BQ9P265 1576 aa21.53■■□□□ 1.04
PRAME-204ENST00000403441 CARMIL1Q5VZK9 1371 aa21.5■■□□□ 1.03
PRAME-204ENST00000403441 PTPRGP23470 1445 aa21.46■■□□□ 1.03
PRAME-204ENST00000403441 CARMIL2Q6F5E8 1435 aa21.46■■□□□ 1.03
PRAME-204ENST00000403441 IQGAP2Q13576 1575 aa21.44■■□□□ 1.02
PRAME-204ENST00000403441 TNIKQ9UKE5 1360 aa21.42■■□□□ 1.02
PRAME-204ENST00000403441 KDM6BO15054 1643 aa21.4■■□□□ 1.02
PRAME-204ENST00000403441 TTBK1Q5TCY1 1321 aaPredicted RBP21.4■■□□□ 1.02
PRAME-204ENST00000403441 ABCC2Q92887 1545 aa21.39■■□□□ 1.01
PRAME-204ENST00000403441 TSPOAP1O95153 1857 aa21.37■■□□□ 1.01
PRAME-204ENST00000403441 PLB1Q6P1J6 1458 aa21.32■■□□□ 1
PRAME-204ENST00000403441 UHRF1BP1LA0JNW5 1464 aa21.32■■□□□ 1
PRAME-204ENST00000403441 RAPGEF2Q9Y4G8 1499 aa21.32■■□□□ 1
PRAME-204ENST00000403441 ASXL2Q76L83 1435 aa21.31■■□□□ 1
PRAME-204ENST00000403441 DISP1Q96F81 1524 aa21.3■■□□□ 1
PRAME-204ENST00000403441 UACAQ9BZF9 1416 aa21.29■■□□□ 1
PRAME-204ENST00000403441 UGGT2Q9NYU1 1516 aa21.28■■□□□ 1
PRAME-204ENST00000403441 GLI2P10070 1586 aa21.27■□□□□ 0.99
PRAME-204ENST00000403441 KIAA0556O60303 1618 aa21.23■□□□□ 0.99
PRAME-204ENST00000403441 KDM5BQ9UGL1 1544 aa21.21■□□□□ 0.99
PRAME-204ENST00000403441 PPRC1Q5VV67 1664 aaKnown RBP21.2■□□□□ 0.98
PRAME-204ENST00000403441 ZCCHC11Q5TAX3 1644 aaKnown RBP21.18■□□□□ 0.98
PRAME-204ENST00000403441 EPRSP07814 1512 aaKnown RBP21.18■□□□□ 0.98
PRAME-204ENST00000403441 KDM4FA0A1W2PPD8 638 aa21.17■□□□□ 0.98
PRAME-204ENST00000403441 CTTNBP2Q8WZ74 1663 aa21.16■□□□□ 0.98
PRAME-204ENST00000403441 MAP3K4Q9Y6R4 1608 aa21.15■□□□□ 0.98
PRAME-204ENST00000403441 TEX14Q8IWB6 1497 aa21.14■□□□□ 0.98
PRAME-204ENST00000403441 GOLGA3Q08378 1498 aa21.13■□□□□ 0.97
PRAME-204ENST00000403441 WDR7Q9Y4E6 1490 aa21.1■□□□□ 0.97
PRAME-204ENST00000403441 ADGRL1O94910 1474 aa21.04■□□□□ 0.96
PRAME-204ENST00000403441 PRXQ9BXM0 1461 aa21.04■□□□□ 0.96
PRAME-204ENST00000403441 COL17A1Q9UMD9 1497 aaPredicted RBP21.04■□□□□ 0.96
PRAME-204ENST00000403441 ABCA8O94911 1581 aa21.03■□□□□ 0.96
PRAME-204ENST00000403441 CFAP43Q8NDM7 1665 aa20.98■□□□□ 0.95
PRAME-204ENST00000403441 CD109Q6YHK3 1445 aa20.97■□□□□ 0.95
PRAME-204ENST00000403441 FAM9AQ8IZU1 332 aaPredicted RBP20.97■□□□□ 0.95
PRAME-204ENST00000403441 MAGI3Q5TCQ9 1506 aa20.96■□□□□ 0.95
PRAME-204ENST00000403441 KCNH8Q96L42 1107 aa20.94■□□□□ 0.94
PRAME-204ENST00000403441 ARID3CA6NKF2 412 aa20.85■□□□□ 0.93
PRAME-204ENST00000403441 P3H3Q8IVL6 736 aa20.85■□□□□ 0.93
PRAME-204ENST00000403441 SAMD9Q5K651 1589 aa20.84■□□□□ 0.93
PRAME-204ENST00000403441 ATP10BO94823 1461 aa20.83■□□□□ 0.93
PRAME-204ENST00000403441 CSRNP3Q8WYN3 585 aa20.83■□□□□ 0.93
PRAME-204ENST00000403441 ARAP3Q8WWN8 1544 aa20.8■□□□□ 0.92
PRAME-204ENST00000403441 RAPGEF6Q8TEU7 1601 aa20.8■□□□□ 0.92
PRAME-204ENST00000403441 HECW2Q9P2P5 1572 aa20.8■□□□□ 0.92
PRAME-204ENST00000403441 ABCA9Q8IUA7 1624 aa20.79■□□□□ 0.92
PRAME-204ENST00000403441 EEA1Q15075 1411 aa20.78■□□□□ 0.92
PRAME-204ENST00000403441 PHLDB1Q86UU1 1377 aa20.77■□□□□ 0.92
PRAME-204ENST00000403441 KIF21BO75037 1637 aa20.77■□□□□ 0.92
PRAME-204ENST00000403441 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.74■□□□□ 0.91
PRAME-204ENST00000403441 HNRNPUL2Q1KMD3 747 aaKnown RBP20.74■□□□□ 0.91
PRAME-204ENST00000403441 NEO1Q92859 1461 aa20.71■□□□□ 0.91
PRAME-204ENST00000403441 NUP153P49790 1475 aaKnown RBP20.7■□□□□ 0.9
PRAME-204ENST00000403441 RANGAP1P46060 587 aaPredicted RBP20.69■□□□□ 0.9
PRAME-204ENST00000403441 ILDR1Q86SU0 546 aaPredicted RBP20.68■□□□□ 0.9
PRAME-204ENST00000403441 FHOD3Q2V2M9 1422 aa20.68■□□□□ 0.9
PRAME-204ENST00000403441 EFCAB5A4FU69 1503 aa20.64■□□□□ 0.9
PRAME-204ENST00000403441 RAPGEF3O95398 923 aa20.64■□□□□ 0.89
PRAME-204ENST00000403441 FRMPD1Q5SYB0 1578 aa20.62■□□□□ 0.89
PRAME-204ENST00000403441 PLEKHD1A6NEE1 506 aa20.61■□□□□ 0.89
PRAME-204ENST00000403441 ADAMTSL3P82987 1691 aa20.59■□□□□ 0.89
PRAME-204ENST00000403441 CFAP74Q9C0B2 1584 aa20.59■□□□□ 0.89
PRAME-204ENST00000403441 PTPRMP28827 1452 aa20.57■□□□□ 0.88
PRAME-204ENST00000403441 ARID4BQ4LE39 1312 aaPredicted RBP20.56■□□□□ 0.88
PRAME-204ENST00000403441 ARHGEF40Q8TER5 1519 aa20.56■□□□□ 0.88
PRAME-204ENST00000403441 FANCAO15360 1455 aa20.56■□□□□ 0.88
PRAME-204ENST00000403441 DENND4BO75064 1496 aaPredicted RBP20.56■□□□□ 0.88
PRAME-204ENST00000403441 BCORL1Q5H9F3 1711 aa20.55■□□□□ 0.88
PRAME-204ENST00000403441 AKNAQ7Z591 1439 aa20.53■□□□□ 0.88
PRAME-204ENST00000403441 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.53■□□□□ 0.887e-13■□□□□ 11.3
PRAME-204ENST00000403441 RICTORQ6R327 1708 aa20.53■□□□□ 0.88
PRAME-204ENST00000403441 TTC37Q6PGP7 1564 aa20.52■□□□□ 0.88
PRAME-204ENST00000403441 MADDQ8WXG6 1647 aa20.51■□□□□ 0.87
PRAME-204ENST00000403441 CDK13Q14004 1512 aaKnown RBP20.49■□□□□ 0.87
PRAME-204ENST00000403441 ZMYM4Q5VZL5 1548 aa20.48■□□□□ 0.87
PRAME-204ENST00000403441 FMN1Q68DA7 1419 aa20.45■□□□□ 0.86
PRAME-204ENST00000403441 POGZQ7Z3K3 1410 aa20.45■□□□□ 0.86
PRAME-204ENST00000403441 ZFYVE16Q7Z3T8 1539 aa20.45■□□□□ 0.86
PRAME-204ENST00000403441 HECW1Q76N89 1606 aa20.45■□□□□ 0.86
PRAME-204ENST00000403441 PCF11O94913 1555 aaKnown RBP20.44■□□□□ 0.86
PRAME-204ENST00000403441 UBTFP17480 764 aaKnown RBP20.44■□□□□ 0.86
PRAME-204ENST00000403441 RIMS1Q86UR5 1692 aaKnown RBP20.44■□□□□ 0.86
PRAME-204ENST00000403441 MAGI2Q86UL8 1455 aa20.43■□□□□ 0.86
PRAME-204ENST00000403441 CHIC1Q5VXU3 224 aa20.42■□□□□ 0.86
PRAME-204ENST00000403441 EHMT2Q96KQ7 1210 aa20.41■□□□□ 0.86
PRAME-204ENST00000403441 ATP1B4Q9UN42 357 aaPredicted RBP20.41■□□□□ 0.86
PRAME-204ENST00000403441 PLCH2O75038 1416 aa20.41■□□□□ 0.86
PRAME-204ENST00000403441 LMTK3Q96Q04 1460 aa20.39■□□□□ 0.85
PRAME-204ENST00000403441 YEATS2Q9ULM3 1422 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms