RNA–Protein interactions for RNA: ENST00000402685.6

PDZRN4-202, Transcript of PDZ domain containing ring finger 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PDZRN4, Length 3,347 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4-202ENST00000402685 WDR97A6NE52 1622 aa28.99■■■□□ 2.23
PDZRN4-202ENST00000402685 ARAP1Q96P48 1450 aa28.94■■■□□ 2.22
PDZRN4-202ENST00000402685 FAM9BQ8IZU0 186 aa28.92■■■□□ 2.22
PDZRN4-202ENST00000402685 BAZ1BQ9UIG0 1483 aaKnown RBP28.91■■■□□ 2.22
PDZRN4-202ENST00000402685 PRKCSHP14314 528 aaPredicted RBP28.87■■■□□ 2.21
PDZRN4-202ENST00000402685 CCER2I3L3R5 266 aa28.85■■■□□ 2.21
PDZRN4-202ENST00000402685 RTN4Q9NQC3 1192 aaKnown RBP28.84■■■□□ 2.21
PDZRN4-202ENST00000402685 FANCIQ9NVI1 1328 aa28.83■■■□□ 2.21
PDZRN4-202ENST00000402685 CCDC184Q52MB2 194 aa28.82■■■□□ 2.2
PDZRN4-202ENST00000402685 RRBP1Q9P2E9 1410 aaKnown RBP28.82■■■□□ 2.2
PDZRN4-202ENST00000402685 ANO8Q9HCE9 1232 aaPredicted RBP28.82■■■□□ 2.2
PDZRN4-202ENST00000402685 PAK3O75914 559 aaPredicted RBP28.81■■■□□ 2.2
PDZRN4-202ENST00000402685 MAPKBP1O60336 1514 aa28.81■■■□□ 2.2
PDZRN4-202ENST00000402685 SETD5Q9C0A6 1442 aa28.78■■■□□ 2.2
PDZRN4-202ENST00000402685 TONSLQ96HA7 1378 aa28.74■■■□□ 2.19
PDZRN4-202ENST00000402685 CCDC136Q96JN2 1154 aa28.7■■■□□ 2.18
PDZRN4-202ENST00000402685 POLR3GLQ9BT43 218 aa28.68■■■□□ 2.18
PDZRN4-202ENST00000402685 PPP4R2Q9NY27 417 aa28.67■■■□□ 2.18
PDZRN4-202ENST00000402685 PHLDB1Q86UU1 1377 aa28.66■■■□□ 2.18
PDZRN4-202ENST00000402685 NOP58Q9Y2X3 529 aaKnown RBP28.64■■■□□ 2.18
PDZRN4-202ENST00000402685 NPM2Q86SE8 214 aaKnown RBP28.63■■■□□ 2.17
PDZRN4-202ENST00000402685 MRS2Q9HD23 443 aa28.59■■■□□ 2.17
PDZRN4-202ENST00000402685 SALL2Q9Y467 1007 aaPredicted RBP28.57■■■□□ 2.16
PDZRN4-202ENST00000402685 ARHGAP35Q9NRY4 1499 aa28.55■■■□□ 2.16
PDZRN4-202ENST00000402685 RTL5Q5HYW3 569 aaPredicted RBP28.54■■■□□ 2.16
PDZRN4-202ENST00000402685 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.53■■■□□ 2.16
PDZRN4-202ENST00000402685 IL27Q8NEV9 243 aa28.53■■■□□ 2.16
PDZRN4-202ENST00000402685 CHIC2Q9UKJ5 165 aa28.53■■■□□ 2.16
PDZRN4-202ENST00000402685 HSPA5P11021 654 aaKnown RBP28.51■■■□□ 2.16
PDZRN4-202ENST00000402685 PRXQ9BXM0 1461 aa28.51■■■□□ 2.15
PDZRN4-202ENST00000402685 CUX2O14529 1486 aa28.48■■■□□ 2.15
PDZRN4-202ENST00000402685 WASHC2AQ641Q2 1341 aa28.46■■■□□ 2.15
PDZRN4-202ENST00000402685 FOXD1Q16676 465 aa28.45■■■□□ 2.14
PDZRN4-202ENST00000402685 UNC13AQ9UPW8 1703 aa28.45■■■□□ 2.14
PDZRN4-202ENST00000402685 LAS1LQ9Y4W2 734 aaKnown RBP28.44■■■□□ 2.14
PDZRN4-202ENST00000402685 RRP7BPQ9NSQ0 103 aa28.43■■■□□ 2.14
PDZRN4-202ENST00000402685 ANP32AP39687 249 aaKnown RBP28.4■■■□□ 2.14
PDZRN4-202ENST00000402685 KIF27Q86VH2 1401 aa28.4■■■□□ 2.14
PDZRN4-202ENST00000402685 ZBTB47Q9UFB7 747 aaPredicted RBP28.4■■■□□ 2.14
PDZRN4-202ENST00000402685 C11orf95C9JLR9 678 aaPredicted RBP28.37■■■□□ 2.13
PDZRN4-202ENST00000402685 ARID3CA6NKF2 412 aa28.35■■■□□ 2.13
PDZRN4-202ENST00000402685 TIMELESSQ9UNS1 1208 aa28.33■■■□□ 2.13
PDZRN4-202ENST00000402685 ATAD2BQ9ULI0 1458 aa28.32■■■□□ 2.12
PDZRN4-202ENST00000402685 MYT1LQ9UL68 1186 aa28.31■■■□□ 2.12
PDZRN4-202ENST00000402685 BICRAQ9NZM4 1560 aa28.3■■■□□ 2.12
PDZRN4-202ENST00000402685 EIF4G2P78344 907 aaKnown RBP eCLIP28.29■■■□□ 2.12
PDZRN4-202ENST00000402685 ZNF326Q5BKZ1 582 aaKnown RBP28.28■■■□□ 2.12
PDZRN4-202ENST00000402685 LRRC9Q6ZRR7 1453 aa28.27■■■□□ 2.12
PDZRN4-202ENST00000402685 AKNAQ7Z591 1439 aa28.27■■■□□ 2.12
PDZRN4-202ENST00000402685 PRKRIP1Q9H875 184 aaPredicted RBP28.26■■■□□ 2.12
PDZRN4-202ENST00000402685 TOP2BQ02880 1626 aa28.25■■■□□ 2.11
PDZRN4-202ENST00000402685 IPO9Q96P70 1041 aaKnown RBP28.24■■■□□ 2.11
PDZRN4-202ENST00000402685 ERICH3Q5RHP9 1530 aa28.24■■■□□ 2.11
PDZRN4-202ENST00000402685 FHOD3Q2V2M9 1422 aa28.19■■■□□ 2.1
PDZRN4-202ENST00000402685 NEFMP07197 916 aa28.18■■■□□ 2.1
PDZRN4-202ENST00000402685 TIAM1Q13009 1591 aa28.16■■■□□ 2.1
PDZRN4-202ENST00000402685 SKAP1Q86WV1 359 aa28.15■■■□□ 2.1
PDZRN4-202ENST00000402685 L3MBTL2Q969R5 705 aa28.15■■■□□ 2.1
PDZRN4-202ENST00000402685 CARMIL1Q5VZK9 1371 aa28.14■■■□□ 2.09
PDZRN4-202ENST00000402685 EIF5BO60841 1220 aaKnown RBP28.13■■■□□ 2.09
PDZRN4-202ENST00000402685 IGF1RP08069 1367 aa28.13■■■□□ 2.09
PDZRN4-202ENST00000402685 CUX1P39880 1505 aa28.12■■■□□ 2.09
PDZRN4-202ENST00000402685 ERICH6BQ5W0A0 696 aa28.12■■■□□ 2.09
PDZRN4-202ENST00000402685 CCDC18Q5T9S5 1454 aa28.11■■■□□ 2.09
PDZRN4-202ENST00000402685 ZBED9Q6R2W3 1325 aa28.11■■■□□ 2.09
PDZRN4-202ENST00000402685 AQRO60306 1485 aaKnown RBP eCLIP28.1■■■□□ 2.09
PDZRN4-202ENST00000402685 MTUS2Q5JR59 1369 aa28.07■■■□□ 2.08
PDZRN4-202ENST00000402685 PTPRKQ15262 1439 aa28.07■■■□□ 2.08
PDZRN4-202ENST00000402685 SLC4A3P48751 1232 aa28.03■■■□□ 2.08
PDZRN4-202ENST00000402685 BRPF3Q9ULD4 1205 aa27.99■■■□□ 2.07
PDZRN4-202ENST00000402685 NBPF8Q3BBV2 869 aa27.99■■■□□ 2.07
PDZRN4-202ENST00000402685 EXOC6Q8TAG9 804 aa27.97■■■□□ 2.07
PDZRN4-202ENST00000402685 CNTLNQ9NXG0 1405 aa27.96■■■□□ 2.07
PDZRN4-202ENST00000402685 NUDCQ9Y266 331 aa27.96■■■□□ 2.07
PDZRN4-202ENST00000402685 FHAD1B1AJZ9 1412 aa27.95■■■□□ 2.06
PDZRN4-202ENST00000402685 CCDC7Q96M83 1385 aa27.94■■■□□ 2.06
PDZRN4-202ENST00000402685 KIF7Q2M1P5 1343 aa27.94■■■□□ 2.06
PDZRN4-202ENST00000402685 UACAQ9BZF9 1416 aa27.92■■■□□ 2.06
PDZRN4-202ENST00000402685 TMC1Q8TDI8 760 aa27.92■■■□□ 2.06
PDZRN4-202ENST00000402685 FGD6Q6ZV73 1430 aa27.91■■■□□ 2.06
PDZRN4-202ENST00000402685 MPHOSPH9Q99550 1183 aa27.9■■■□□ 2.06
PDZRN4-202ENST00000402685 PCF11O94913 1555 aaKnown RBP27.87■■■□□ 2.05
PDZRN4-202ENST00000402685 PLIN1O60240 522 aa27.87■■■□□ 2.05
PDZRN4-202ENST00000402685 PDE4AP27815 886 aa27.85■■■□□ 2.05
PDZRN4-202ENST00000402685 BIVM-ERCC5R4GMW8 1640 aa27.85■■■□□ 2.05
PDZRN4-202ENST00000402685 PEG3Q9GZU2 1588 aa27.84■■■□□ 2.05
PDZRN4-202ENST00000402685 NAIPQ13075 1403 aa27.83■■■□□ 2.05
PDZRN4-202ENST00000402685 HFM1A2PYH4 1435 aa27.77■■■□□ 2.04
PDZRN4-202ENST00000402685 FMN1Q68DA7 1419 aa27.77■■■□□ 2.04
PDZRN4-202ENST00000402685 SLC4A1APQ9BWU0 796 aaKnown RBP27.77■■■□□ 2.04
PDZRN4-202ENST00000402685 ARXQ96QS3 562 aa27.72■■■□□ 2.03
PDZRN4-202ENST00000402685 DAXXQ9UER7 740 aaPredicted RBP27.71■■■□□ 2.03
PDZRN4-202ENST00000402685 KDM2AQ9Y2K7 1162 aa27.71■■■□□ 2.03
PDZRN4-202ENST00000402685 CDCA7LQ96GN5 454 aa27.69■■■□□ 2.02
PDZRN4-202ENST00000402685 SMG6Q86US8 1419 aaKnown RBP27.69■■■□□ 2.02
PDZRN4-202ENST00000402685 KDM5BQ9UGL1 1544 aa27.68■■■□□ 2.02
PDZRN4-202ENST00000402685 NCOA1Q15788 1441 aa27.67■■■□□ 2.02
PDZRN4-202ENST00000402685 RRP1P56182 461 aaKnown RBP27.66■■■□□ 2.02
PDZRN4-202ENST00000402685 MAP3K1Q13233 1512 aa27.65■■■□□ 2.02
PDZRN4-202ENST00000402685 PTPN23Q9H3S7 1636 aa27.65■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms