RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 KIAA0586Q9BVV6 1533 aa32.31■■■□□ 2.76
RTN4-207ENST00000402434 JPH4Q96JJ6 628 aa32.3■■■□□ 2.76
RTN4-207ENST00000402434 RAPGEF2Q9Y4G8 1499 aa32.3■■■□□ 2.76
RTN4-207ENST00000402434 ERCC6L2Q5T890 1561 aa32.24■■■□□ 2.75
RTN4-207ENST00000402434 PRXQ9BXM0 1461 aa32.22■■■□□ 2.75
RTN4-207ENST00000402434 EEA1Q15075 1411 aa32.21■■■□□ 2.75
RTN4-207ENST00000402434 PRG4Q92954 1404 aaPredicted RBP32.21■■■□□ 2.75
RTN4-207ENST00000402434 CSRNP3Q8WYN3 585 aa32.2■■■□□ 2.75
RTN4-207ENST00000402434 IQGAP2Q13576 1575 aa32.08■■■□□ 2.73
RTN4-207ENST00000402434 FAM9AQ8IZU1 332 aaPredicted RBP32.02■■■□□ 2.72
RTN4-207ENST00000402434 UGGT2Q9NYU1 1516 aa31.94■■■□□ 2.7
RTN4-207ENST00000402434 CARMIL2Q6F5E8 1435 aa31.94■■■□□ 2.7
RTN4-207ENST00000402434 CTTNBP2Q8WZ74 1663 aa31.93■■■□□ 2.7
RTN4-207ENST00000402434 DISP1Q96F81 1524 aa31.89■■■□□ 2.7
RTN4-207ENST00000402434 TNIKQ9UKE5 1360 aa31.85■■■□□ 2.69
RTN4-207ENST00000402434 KIF21BO75037 1637 aa31.84■■■□□ 2.69
RTN4-207ENST00000402434 PTPRGP23470 1445 aa31.83■■■□□ 2.69
RTN4-207ENST00000402434 KIAA0556O60303 1618 aa31.77■■■□□ 2.68
RTN4-207ENST00000402434 GOLGA3Q08378 1498 aa31.75■■■□□ 2.67
RTN4-207ENST00000402434 ADCY10Q96PN6 1610 aa31.69■■■□□ 2.66
RTN4-207ENST00000402434 TTBK1Q5TCY1 1321 aaPredicted RBP31.69■■■□□ 2.66
RTN4-207ENST00000402434 TRHP20396 242 aaPredicted RBP31.65■■■□□ 2.66
RTN4-207ENST00000402434 NPM1P06748 294 aaKnown RBP eCLIP31.62■■■□□ 2.65
RTN4-207ENST00000402434 UACAQ9BZF9 1416 aa31.62■■■□□ 2.65
RTN4-207ENST00000402434 UHRF1BP1LA0JNW5 1464 aa31.61■■■□□ 2.65
RTN4-207ENST00000402434 UBTFP17480 764 aaKnown RBP31.59■■■□□ 2.65
RTN4-207ENST00000402434 SAMD9Q5K651 1589 aa31.57■■■□□ 2.64
RTN4-207ENST00000402434 EHMT2Q96KQ7 1210 aa31.56■■■□□ 2.64
RTN4-207ENST00000402434 ABCC2Q92887 1545 aa31.55■■■□□ 2.64
RTN4-207ENST00000402434 P3H3Q8IVL6 736 aa31.53■■■□□ 2.64
RTN4-207ENST00000402434 MAPKBP1O60336 1514 aa31.52■■■□□ 2.64
RTN4-207ENST00000402434 PLB1Q6P1J6 1458 aa31.49■■■□□ 2.63
RTN4-207ENST00000402434 RANGAP1P46060 587 aaPredicted RBP31.48■■■□□ 2.63
RTN4-207ENST00000402434 KDM5BQ9UGL1 1544 aa31.45■■■□□ 2.63
RTN4-207ENST00000402434 ABCA8O94911 1581 aa31.45■■■□□ 2.62
RTN4-207ENST00000402434 EFCAB5A4FU69 1503 aa31.43■■■□□ 2.62
RTN4-207ENST00000402434 ABCC10Q5T3U5 1492 aa31.38■■■□□ 2.61
RTN4-207ENST00000402434 FHOD3Q2V2M9 1422 aa31.38■■■□□ 2.61
RTN4-207ENST00000402434 ASXL2Q76L83 1435 aa31.34■■■□□ 2.61
RTN4-207ENST00000402434 KIF13AQ9H1H9 1805 aa31.33■■■□□ 2.61
RTN4-207ENST00000402434 ZCCHC11Q5TAX3 1644 aaKnown RBP31.32■■■□□ 2.6
RTN4-207ENST00000402434 FAM69CQ0P6D2 419 aa31.32■■■□□ 2.6
RTN4-207ENST00000402434 ARHGAP35Q9NRY4 1499 aa31.3■■■□□ 2.6
RTN4-207ENST00000402434 DIP2BQ9P265 1576 aa31.29■■■□□ 2.6
RTN4-207ENST00000402434 RAPGEF6Q8TEU7 1601 aa31.25■■■□□ 2.59
RTN4-207ENST00000402434 ATP10BO94823 1461 aa31.22■■■□□ 2.59
RTN4-207ENST00000402434 NUP153P49790 1475 aaKnown RBP31.18■■■□□ 2.58
RTN4-207ENST00000402434 WDR7Q9Y4E6 1490 aa31.17■■■□□ 2.58
RTN4-207ENST00000402434 FMN1Q68DA7 1419 aa31.17■■■□□ 2.58
RTN4-207ENST00000402434 GLI2P10070 1586 aa31.16■■■□□ 2.58
RTN4-207ENST00000402434 EPRSP07814 1512 aaKnown RBP31.16■■■□□ 2.58
RTN4-207ENST00000402434 ARID3CA6NKF2 412 aa31.14■■■□□ 2.58
RTN4-207ENST00000402434 CLIP1P30622 1438 aa31.1■■■□□ 2.57
RTN4-207ENST00000402434 LOC105371045A0A1W2PR82 267 aa31.04■■■□□ 2.56
RTN4-207ENST00000402434 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.03■■■□□ 2.56
RTN4-207ENST00000402434 HNRNPUL2Q1KMD3 747 aaKnown RBP31.03■■■□□ 2.56
RTN4-207ENST00000402434 KCNH8Q96L42 1107 aa31.02■■■□□ 2.56
RTN4-207ENST00000402434 MAP3K4Q9Y6R4 1608 aa31■■■□□ 2.55
RTN4-207ENST00000402434 TSPOAP1O95153 1857 aa30.99■■■□□ 2.55
RTN4-207ENST00000402434 HECW1Q76N89 1606 aa30.97■■■□□ 2.55
RTN4-207ENST00000402434 PLEKHD1A6NEE1 506 aa30.95■■■□□ 2.55
RTN4-207ENST00000402434 CEP162Q5TB80 1403 aa30.95■■■□□ 2.55
RTN4-207ENST00000402434 ATP1B4Q9UN42 357 aaPredicted RBP30.94■■■□□ 2.54
RTN4-207ENST00000402434 PPRC1Q5VV67 1664 aaKnown RBP30.93■■■□□ 2.54
RTN4-207ENST00000402434 CASKIN1Q8WXD9 1431 aa30.93■■■□□ 2.54
RTN4-207ENST00000402434 CDK13Q14004 1512 aaKnown RBP30.92■■■□□ 2.54
RTN4-207ENST00000402434 CD109Q6YHK3 1445 aa30.9■■■□□ 2.54
RTN4-207ENST00000402434 CFAP43Q8NDM7 1665 aa30.89■■■□□ 2.54
RTN4-207ENST00000402434 PCF11O94913 1555 aaKnown RBP30.86■■■□□ 2.53
RTN4-207ENST00000402434 MAGI3Q5TCQ9 1506 aa30.85■■■□□ 2.53
RTN4-207ENST00000402434 TEX14Q8IWB6 1497 aa30.85■■■□□ 2.53
RTN4-207ENST00000402434 ABCA9Q8IUA7 1624 aa30.85■■■□□ 2.53
RTN4-207ENST00000402434 FYCO1Q9BQS8 1478 aa30.83■■■□□ 2.53
RTN4-207ENST00000402434 CDK11AQ9UQ88 783 aaPredicted RBP30.82■■■□□ 2.53
RTN4-207ENST00000402434 LRRIQ1Q96JM4 1722 aa30.81■■■□□ 2.52
RTN4-207ENST00000402434 KDM6BO15054 1643 aa30.78■■■□□ 2.52
RTN4-207ENST00000402434 CCDC18Q5T9S5 1454 aa30.78■■■□□ 2.52
RTN4-207ENST00000402434 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.71■■■□□ 2.519e-15■□□□□ 10.5
RTN4-207ENST00000402434 TROQ12816 1431 aaPredicted RBP30.71■■■□□ 2.51
RTN4-207ENST00000402434 COL17A1Q9UMD9 1497 aaPredicted RBP30.71■■■□□ 2.51
RTN4-207ENST00000402434 PHLDB1Q86UU1 1377 aa30.64■■■□□ 2.5
RTN4-207ENST00000402434 TTC37Q6PGP7 1564 aa30.64■■■□□ 2.5
RTN4-207ENST00000402434 NEO1Q92859 1461 aa30.62■■■□□ 2.49
RTN4-207ENST00000402434 ARAP3Q8WWN8 1544 aa30.6■■■□□ 2.49
RTN4-207ENST00000402434 VPS8Q8N3P4 1428 aa30.6■■■□□ 2.49
RTN4-207ENST00000402434 KIF14Q15058 1648 aa30.59■■■□□ 2.49
RTN4-207ENST00000402434 PLCH2O75038 1416 aa30.57■■■□□ 2.48
RTN4-207ENST00000402434 FANCAO15360 1455 aa30.54■■■□□ 2.48
RTN4-207ENST00000402434 AKNAQ7Z591 1439 aa30.49■■■□□ 2.47
RTN4-207ENST00000402434 MYO5CQ9NQX4 1742 aa30.48■■■□□ 2.47
RTN4-207ENST00000402434 CFAP74Q9C0B2 1584 aa30.47■■■□□ 2.47
RTN4-207ENST00000402434 MTUS2Q5JR59 1369 aa30.47■■■□□ 2.47
RTN4-207ENST00000402434 EFCAB2Q5VUJ9 269 aa30.45■■■□□ 2.47
RTN4-207ENST00000402434 RAPGEF3O95398 923 aa30.43■■■□□ 2.46
RTN4-207ENST00000402434 DENND4BO75064 1496 aaPredicted RBP30.39■■■□□ 2.46
RTN4-207ENST00000402434 TIAM1Q13009 1591 aa30.38■■■□□ 2.45
RTN4-207ENST00000402434 EHBP1L1Q8N3D4 1523 aa30.38■■■□□ 2.45
RTN4-207ENST00000402434 ARHGAP5Q13017 1502 aa30.38■■■□□ 2.45
RTN4-207ENST00000402434 MAP3K1Q13233 1512 aa30.37■■■□□ 2.45
RTN4-207ENST00000402434 CDC42BPBQ9Y5S2 1711 aa30.37■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms