RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 RUSC2Q8N2Y8 1516 aa27.24■■□□□ 1.95
ATG4B-203ENST00000400772 PRG4Q92954 1404 aaPredicted RBP27.24■■□□□ 1.95
ATG4B-203ENST00000400772 TRHP20396 242 aaPredicted RBP27.19■■□□□ 1.94
ATG4B-203ENST00000400772 KIAA0586Q9BVV6 1533 aa27.17■■□□□ 1.94
ATG4B-203ENST00000400772 RAPGEF2Q9Y4G8 1499 aa27.02■■□□□ 1.92
ATG4B-203ENST00000400772 IQGAP2Q13576 1575 aa26.92■■□□□ 1.9
ATG4B-203ENST00000400772 PRXQ9BXM0 1461 aa26.87■■□□□ 1.89
ATG4B-203ENST00000400772 PTPRGP23470 1445 aa26.86■■□□□ 1.89
ATG4B-203ENST00000400772 CARMIL2Q6F5E8 1435 aa26.86■■□□□ 1.89
ATG4B-203ENST00000400772 TNIKQ9UKE5 1360 aa26.84■■□□□ 1.89
ATG4B-203ENST00000400772 ADCY10Q96PN6 1610 aa26.84■■□□□ 1.89
ATG4B-203ENST00000400772 DISP1Q96F81 1524 aa26.83■■□□□ 1.89
ATG4B-203ENST00000400772 TTBK1Q5TCY1 1321 aaPredicted RBP26.81■■□□□ 1.88
ATG4B-203ENST00000400772 UGGT2Q9NYU1 1516 aa26.8■■□□□ 1.88
ATG4B-203ENST00000400772 NPM1P06748 294 aaKnown RBP eCLIP26.8■■□□□ 1.88
ATG4B-203ENST00000400772 CSRNP3Q8WYN3 585 aa26.76■■□□□ 1.87
ATG4B-203ENST00000400772 MAPKBP1O60336 1514 aa26.73■■□□□ 1.87
ATG4B-203ENST00000400772 CTTNBP2Q8WZ74 1663 aa26.7■■□□□ 1.87
ATG4B-203ENST00000400772 KIF13AQ9H1H9 1805 aa26.7■■□□□ 1.87
ATG4B-203ENST00000400772 KIAA0556O60303 1618 aa26.69■■□□□ 1.86
ATG4B-203ENST00000400772 ABCC10Q5T3U5 1492 aa26.68■■□□□ 1.86
ATG4B-203ENST00000400772 FAM69CQ0P6D2 419 aa26.67■■□□□ 1.86
ATG4B-203ENST00000400772 UACAQ9BZF9 1416 aa26.66■■□□□ 1.86
ATG4B-203ENST00000400772 EEA1Q15075 1411 aa26.65■■□□□ 1.86
ATG4B-203ENST00000400772 UHRF1BP1LA0JNW5 1464 aa26.65■■□□□ 1.86
ATG4B-203ENST00000400772 ABCC2Q92887 1545 aa26.65■■□□□ 1.86
ATG4B-203ENST00000400772 CHIC1Q5VXU3 224 aa26.64■■□□□ 1.86
ATG4B-203ENST00000400772 DIP2BQ9P265 1576 aa26.6■■□□□ 1.85
ATG4B-203ENST00000400772 FAM9AQ8IZU1 332 aaPredicted RBP26.6■■□□□ 1.85
ATG4B-203ENST00000400772 GOLGA3Q08378 1498 aa26.59■■□□□ 1.85
ATG4B-203ENST00000400772 KDM5BQ9UGL1 1544 aa26.54■■□□□ 1.84
ATG4B-203ENST00000400772 ASXL2Q76L83 1435 aa26.53■■□□□ 1.84
ATG4B-203ENST00000400772 PLB1Q6P1J6 1458 aa26.51■■□□□ 1.83
ATG4B-203ENST00000400772 P3H3Q8IVL6 736 aa26.47■■□□□ 1.83
ATG4B-203ENST00000400772 ABCA8O94911 1581 aa26.45■■□□□ 1.82
ATG4B-203ENST00000400772 ZCCHC11Q5TAX3 1644 aaKnown RBP26.44■■□□□ 1.82
ATG4B-203ENST00000400772 KIF21BO75037 1637 aa26.41■■□□□ 1.82
ATG4B-203ENST00000400772 SAMD9Q5K651 1589 aa26.41■■□□□ 1.82
ATG4B-203ENST00000400772 GLI2P10070 1586 aa26.4■■□□□ 1.82
ATG4B-203ENST00000400772 EPRSP07814 1512 aaKnown RBP26.38■■□□□ 1.81
ATG4B-203ENST00000400772 TSPOAP1O95153 1857 aa26.38■■□□□ 1.81
ATG4B-203ENST00000400772 RANGAP1P46060 587 aaPredicted RBP26.35■■□□□ 1.81
ATG4B-203ENST00000400772 WDR7Q9Y4E6 1490 aa26.31■■□□□ 1.8
ATG4B-203ENST00000400772 PPRC1Q5VV67 1664 aaKnown RBP26.29■■□□□ 1.8
ATG4B-203ENST00000400772 EHMT2Q96KQ7 1210 aa26.29■■□□□ 1.8
ATG4B-203ENST00000400772 FHOD3Q2V2M9 1422 aa26.27■■□□□ 1.8
ATG4B-203ENST00000400772 ATP10BO94823 1461 aa26.26■■□□□ 1.79
ATG4B-203ENST00000400772 ARID3CA6NKF2 412 aa26.26■■□□□ 1.79
ATG4B-203ENST00000400772 MAP3K4Q9Y6R4 1608 aa26.25■■□□□ 1.79
ATG4B-203ENST00000400772 UBTFP17480 764 aaKnown RBP26.24■■□□□ 1.79
ATG4B-203ENST00000400772 KDM6BO15054 1643 aa26.24■■□□□ 1.79
ATG4B-203ENST00000400772 KCNH8Q96L42 1107 aa26.23■■□□□ 1.79
ATG4B-203ENST00000400772 RAPGEF6Q8TEU7 1601 aa26.21■■□□□ 1.79
ATG4B-203ENST00000400772 EFCAB5A4FU69 1503 aa26.19■■□□□ 1.78
ATG4B-203ENST00000400772 NUP153P49790 1475 aaKnown RBP26.16■■□□□ 1.78
ATG4B-203ENST00000400772 COL17A1Q9UMD9 1497 aaPredicted RBP26.15■■□□□ 1.78
ATG4B-203ENST00000400772 CD109Q6YHK3 1445 aa26.14■■□□□ 1.77
ATG4B-203ENST00000400772 TEX14Q8IWB6 1497 aa26.13■■□□□ 1.77
ATG4B-203ENST00000400772 MAGI3Q5TCQ9 1506 aa26.09■■□□□ 1.77
ATG4B-203ENST00000400772 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.09■■□□□ 1.77
ATG4B-203ENST00000400772 HNRNPUL2Q1KMD3 747 aaKnown RBP26.09■■□□□ 1.77
ATG4B-203ENST00000400772 CFAP43Q8NDM7 1665 aa26.09■■□□□ 1.77
ATG4B-203ENST00000400772 ARHGAP35Q9NRY4 1499 aa26.08■■□□□ 1.77
ATG4B-203ENST00000400772 AEBP2Q6ZN18 517 aaPredicted RBP26.05■■□□□ 1.76
ATG4B-203ENST00000400772 ABCA9Q8IUA7 1624 aa25.99■■□□□ 1.75
ATG4B-203ENST00000400772 PLEKHD1A6NEE1 506 aa25.98■■□□□ 1.75
ATG4B-203ENST00000400772 FMN1Q68DA7 1419 aa25.97■■□□□ 1.75
ATG4B-203ENST00000400772 KDM4FA0A1W2PPD8 638 aa25.93■■□□□ 1.74
ATG4B-203ENST00000400772 CDK13Q14004 1512 aaKnown RBP25.92■■□□□ 1.74
ATG4B-203ENST00000400772 ATP1B4Q9UN42 357 aaPredicted RBP25.9■■□□□ 1.74
ATG4B-203ENST00000400772 ARAP3Q8WWN8 1544 aa25.88■■□□□ 1.73
ATG4B-203ENST00000400772 HECW1Q76N89 1606 aa25.85■■□□□ 1.73
ATG4B-203ENST00000400772 PHLDB1Q86UU1 1377 aa25.85■■□□□ 1.73
ATG4B-203ENST00000400772 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.83■■□□□ 1.73
ATG4B-203ENST00000400772 NEO1Q92859 1461 aa25.83■■□□□ 1.73
ATG4B-203ENST00000400772 RAPGEF3O95398 923 aa25.78■■□□□ 1.72
ATG4B-203ENST00000400772 TTC37Q6PGP7 1564 aa25.78■■□□□ 1.72
ATG4B-203ENST00000400772 CLIP1P30622 1438 aa25.77■■□□□ 1.72
ATG4B-203ENST00000400772 CDK11AQ9UQ88 783 aaPredicted RBP25.76■■□□□ 1.71
ATG4B-203ENST00000400772 CASKIN1Q8WXD9 1431 aa25.76■■□□□ 1.71
ATG4B-203ENST00000400772 LRRIQ1Q96JM4 1722 aa25.76■■□□□ 1.71
ATG4B-203ENST00000400772 ADGRL1O94910 1474 aa25.73■■□□□ 1.71
ATG4B-203ENST00000400772 AKNAQ7Z591 1439 aa25.72■■□□□ 1.71
ATG4B-203ENST00000400772 PCF11O94913 1555 aaKnown RBP25.72■■□□□ 1.71
ATG4B-203ENST00000400772 FANCAO15360 1455 aa25.72■■□□□ 1.71
ATG4B-203ENST00000400772 TROQ12816 1431 aaPredicted RBP25.71■■□□□ 1.71
ATG4B-203ENST00000400772 PLCH2O75038 1416 aa25.7■■□□□ 1.7
ATG4B-203ENST00000400772 FRMPD1Q5SYB0 1578 aa25.69■■□□□ 1.7
ATG4B-203ENST00000400772 KIF14Q15058 1648 aa25.66■■□□□ 1.7
ATG4B-203ENST00000400772 DENND4BO75064 1496 aaPredicted RBP25.65■■□□□ 1.7
ATG4B-203ENST00000400772 CCDC18Q5T9S5 1454 aa25.65■■□□□ 1.7
ATG4B-203ENST00000400772 FYCO1Q9BQS8 1478 aa25.64■■□□□ 1.69
ATG4B-203ENST00000400772 CFAP74Q9C0B2 1584 aa25.63■■□□□ 1.69
ATG4B-203ENST00000400772 RICTORQ6R327 1708 aa25.6■■□□□ 1.69
ATG4B-203ENST00000400772 EFCAB2Q5VUJ9 269 aa25.59■■□□□ 1.69
ATG4B-203ENST00000400772 LOC105371045A0A1W2PR82 267 aa25.58■■□□□ 1.69
ATG4B-203ENST00000400772 CEP162Q5TB80 1403 aa25.57■■□□□ 1.68
ATG4B-203ENST00000400772 MYO5CQ9NQX4 1742 aa25.57■■□□□ 1.68
ATG4B-203ENST00000400772 SCAPERQ9BY12 1400 aa25.56■■□□□ 1.68
ATG4B-203ENST00000400772 POGZQ7Z3K3 1410 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms