RNA–Protein interactions for RNA: ENST00000400761.7

PDGFA-202, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-202ENST00000400761 MAPKBP1O60336 1514 aa30.91■■■□□ 2.54
PDGFA-202ENST00000400761 BIVM-ERCC5R4GMW8 1640 aa30.91■■■□□ 2.54
PDGFA-202ENST00000400761 KDM4FA0A1W2PPD8 638 aa30.9■■■□□ 2.54
PDGFA-202ENST00000400761 DIP2BQ9P265 1576 aa30.9■■■□□ 2.54
PDGFA-202ENST00000400761 TOP2BQ02880 1626 aa30.89■■■□□ 2.54
PDGFA-202ENST00000400761 NPM1P06748 294 aaKnown RBP eCLIP30.87■■■□□ 2.53
PDGFA-202ENST00000400761 KDM6BO15054 1643 aa30.84■■■□□ 2.53
PDGFA-202ENST00000400761 ILDR1Q86SU0 546 aaPredicted RBP30.81■■■□□ 2.52
PDGFA-202ENST00000400761 RUSC2Q8N2Y8 1516 aa30.8■■■□□ 2.52
PDGFA-202ENST00000400761 ADCY10Q96PN6 1610 aa30.8■■■□□ 2.52
PDGFA-202ENST00000400761 TSPOAP1O95153 1857 aa30.72■■■□□ 2.51
PDGFA-202ENST00000400761 KIAA0586Q9BVV6 1533 aa30.55■■■□□ 2.48
PDGFA-202ENST00000400761 ADGRL1O94910 1474 aa30.45■■■□□ 2.47
PDGFA-202ENST00000400761 PPRC1Q5VV67 1664 aaKnown RBP30.43■■■□□ 2.46
PDGFA-202ENST00000400761 PTPRGP23470 1445 aa30.41■■■□□ 2.46
PDGFA-202ENST00000400761 GLI2P10070 1586 aa30.39■■■□□ 2.46
PDGFA-202ENST00000400761 ABCC2Q92887 1545 aa30.38■■■□□ 2.45
PDGFA-202ENST00000400761 IGF1RP08069 1367 aa30.36■■■□□ 2.45
PDGFA-202ENST00000400761 ASXL2Q76L83 1435 aa30.36■■■□□ 2.45
PDGFA-202ENST00000400761 PLB1Q6P1J6 1458 aa30.35■■■□□ 2.45
PDGFA-202ENST00000400761 CUL7Q14999 1698 aa30.35■■■□□ 2.45
PDGFA-202ENST00000400761 HECW2Q9P2P5 1572 aa30.32■■■□□ 2.44
PDGFA-202ENST00000400761 TTBK1Q5TCY1 1321 aaPredicted RBP30.3■■■□□ 2.44
PDGFA-202ENST00000400761 TNIKQ9UKE5 1360 aa30.29■■■□□ 2.44
PDGFA-202ENST00000400761 COL17A1Q9UMD9 1497 aaPredicted RBP30.28■■■□□ 2.44
PDGFA-202ENST00000400761 CARMIL2Q6F5E8 1435 aa30.25■■■□□ 2.43
PDGFA-202ENST00000400761 KIF27Q86VH2 1401 aa30.24■■■□□ 2.43
PDGFA-202ENST00000400761 UHRF1BP1LA0JNW5 1464 aa30.24■■■□□ 2.43
PDGFA-202ENST00000400761 MAP3K4Q9Y6R4 1608 aa30.19■■■□□ 2.42
PDGFA-202ENST00000400761 EPRSP07814 1512 aaKnown RBP30.17■■■□□ 2.42
PDGFA-202ENST00000400761 UACAQ9BZF9 1416 aa30.16■■■□□ 2.42
PDGFA-202ENST00000400761 TEX14Q8IWB6 1497 aa30.15■■■□□ 2.42
PDGFA-202ENST00000400761 IQGAP2Q13576 1575 aa30.13■■■□□ 2.41
PDGFA-202ENST00000400761 CARMIL1Q5VZK9 1371 aa30.13■■■□□ 2.41
PDGFA-202ENST00000400761 KDM5BQ9UGL1 1544 aa30.11■■■□□ 2.41
PDGFA-202ENST00000400761 DISP1Q96F81 1524 aa30.06■■■□□ 2.4
PDGFA-202ENST00000400761 ZCCHC11Q5TAX3 1644 aaKnown RBP30.04■■■□□ 2.4
PDGFA-202ENST00000400761 WDR7Q9Y4E6 1490 aa29.93■■■□□ 2.38
PDGFA-202ENST00000400761 UGGT2Q9NYU1 1516 aa29.92■■■□□ 2.38
PDGFA-202ENST00000400761 FBXO41Q8TF61 875 aa29.92■■■□□ 2.38
PDGFA-202ENST00000400761 KIAA0556O60303 1618 aa29.87■■■□□ 2.37
PDGFA-202ENST00000400761 MAGI3Q5TCQ9 1506 aa29.86■■■□□ 2.37
PDGFA-202ENST00000400761 CFAP43Q8NDM7 1665 aa29.84■■■□□ 2.37
PDGFA-202ENST00000400761 CD109Q6YHK3 1445 aa29.83■■■□□ 2.37
PDGFA-202ENST00000400761 KIF21BO75037 1637 aa29.8■■■□□ 2.36
PDGFA-202ENST00000400761 RAPGEF2Q9Y4G8 1499 aa29.76■■■□□ 2.35
PDGFA-202ENST00000400761 KCNH8Q96L42 1107 aa29.72■■■□□ 2.35
PDGFA-202ENST00000400761 ABCA8O94911 1581 aa29.67■■■□□ 2.34
PDGFA-202ENST00000400761 ARAP3Q8WWN8 1544 aa29.66■■■□□ 2.34
PDGFA-202ENST00000400761 PTPRMP28827 1452 aa29.64■■■□□ 2.34
PDGFA-202ENST00000400761 ADAMTSL3P82987 1691 aa29.63■■■□□ 2.33
PDGFA-202ENST00000400761 CTTNBP2Q8WZ74 1663 aa29.59■■■□□ 2.33
PDGFA-202ENST00000400761 GOLGA3Q08378 1498 aa29.58■■■□□ 2.33
PDGFA-202ENST00000400761 PCF11O94913 1555 aaKnown RBP29.5■■■□□ 2.31
PDGFA-202ENST00000400761 PHLDB1Q86UU1 1377 aa29.49■■■□□ 2.31
PDGFA-202ENST00000400761 BCORL1Q5H9F3 1711 aa29.47■■■□□ 2.31
PDGFA-202ENST00000400761 LMTK3Q96Q04 1460 aa29.46■■■□□ 2.31
PDGFA-202ENST00000400761 ABCA9Q8IUA7 1624 aa29.45■■■□□ 2.3
PDGFA-202ENST00000400761 MADDQ8WXG6 1647 aa29.44■■■□□ 2.3
PDGFA-202ENST00000400761 RAPGEF3O95398 923 aa29.43■■■□□ 2.3
PDGFA-202ENST00000400761 ATP10BO94823 1461 aa29.41■■■□□ 2.3
PDGFA-202ENST00000400761 CHIC1Q5VXU3 224 aa29.39■■■□□ 2.3
PDGFA-202ENST00000400761 NEO1Q92859 1461 aa29.37■■■□□ 2.29
PDGFA-202ENST00000400761 ARID3CA6NKF2 412 aa29.37■■■□□ 2.29
PDGFA-202ENST00000400761 FRMPD1Q5SYB0 1578 aa29.36■■■□□ 2.29
PDGFA-202ENST00000400761 ARID4BQ4LE39 1312 aaPredicted RBP29.36■■■□□ 2.29
PDGFA-202ENST00000400761 RIMS1Q86UR5 1692 aaKnown RBP29.31■■■□□ 2.28
PDGFA-202ENST00000400761 FAM9AQ8IZU1 332 aaPredicted RBP29.29■■■□□ 2.28
PDGFA-202ENST00000400761 ARHGEF40Q8TER5 1519 aa29.25■■■□□ 2.27
PDGFA-202ENST00000400761 PRXQ9BXM0 1461 aa29.25■■■□□ 2.27
PDGFA-202ENST00000400761 HSPA2P54652 639 aa29.25■■■□□ 2.27
PDGFA-202ENST00000400761 P3H3Q8IVL6 736 aa29.23■■■□□ 2.27
PDGFA-202ENST00000400761 CERKQ8TCT0 537 aa29.22■■■□□ 2.27
PDGFA-202ENST00000400761 RICTORQ6R327 1708 aa29.17■■■□□ 2.26
PDGFA-202ENST00000400761 RAPGEF6Q8TEU7 1601 aa29.17■■■□□ 2.26
PDGFA-202ENST00000400761 DENND4BO75064 1496 aaPredicted RBP29.15■■■□□ 2.26
PDGFA-202ENST00000400761 FHOD3Q2V2M9 1422 aa29.12■■■□□ 2.25
PDGFA-202ENST00000400761 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.12■■■□□ 2.25
PDGFA-202ENST00000400761 HNRNPUL2Q1KMD3 747 aaKnown RBP29.12■■■□□ 2.25
PDGFA-202ENST00000400761 SAMD9Q5K651 1589 aa29.12■■■□□ 2.25
PDGFA-202ENST00000400761 POGZQ7Z3K3 1410 aa29.11■■■□□ 2.25
PDGFA-202ENST00000400761 FANCAO15360 1455 aa29.11■■■□□ 2.25
PDGFA-202ENST00000400761 PLPPR3Q6T4P5 718 aa29.11■■■□□ 2.25
PDGFA-202ENST00000400761 AKNAQ7Z591 1439 aa29.09■■■□□ 2.25
PDGFA-202ENST00000400761 SIGLEC1Q9BZZ2 1709 aa29.08■■■□□ 2.25
PDGFA-202ENST00000400761 ILDR2Q71H61 639 aa29.07■■■□□ 2.24
PDGFA-202ENST00000400761 NUP153P49790 1475 aaKnown RBP29.06■■■□□ 2.24
PDGFA-202ENST00000400761 ZMYM4Q5VZL5 1548 aa29.05■■■□□ 2.24
PDGFA-202ENST00000400761 CFAP74Q9C0B2 1584 aa29.05■■■□□ 2.24
PDGFA-202ENST00000400761 DISP3Q9P2K9 1392 aa29.04■■■□□ 2.24
PDGFA-202ENST00000400761 SOCS7O14512 581 aa29.03■■■□□ 2.24
PDGFA-202ENST00000400761 ZFYVE16Q7Z3T8 1539 aa29.03■■■□□ 2.24
PDGFA-202ENST00000400761 EFCAB5A4FU69 1503 aa29.02■■■□□ 2.24
PDGFA-202ENST00000400761 FER1L4A9Z1Z3 1794 aa29.02■■■□□ 2.24
PDGFA-202ENST00000400761 YEATS2Q9ULM3 1422 aa29.02■■■□□ 2.24
PDGFA-202ENST00000400761 TTC37Q6PGP7 1564 aa29.01■■■□□ 2.23
PDGFA-202ENST00000400761 MAGI2Q86UL8 1455 aa28.97■■■□□ 2.23
PDGFA-202ENST00000400761 PLEKHD1A6NEE1 506 aa28.97■■■□□ 2.23
PDGFA-202ENST00000400761 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.96■■■□□ 2.23
PDGFA-202ENST00000400761 MLECQ14165 292 aa28.96■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms