RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 CUL7Q14999 1698 aa21.18■□□□□ 0.98
LINC00544-201ENST00000400540 ADCY10Q96PN6 1610 aa21.16■□□□□ 0.98
LINC00544-201ENST00000400540 AEBP2Q6ZN18 517 aaPredicted RBP21.15■□□□□ 0.98
LINC00544-201ENST00000400540 DIP2BQ9P265 1576 aa21.1■□□□□ 0.97
LINC00544-201ENST00000400540 MAPKBP1O60336 1514 aa21.09■□□□□ 0.97
LINC00544-201ENST00000400540 KIAA0586Q9BVV6 1533 aa21.08■□□□□ 0.96
LINC00544-201ENST00000400540 IGF1RP08069 1367 aa21.08■□□□□ 0.96
LINC00544-201ENST00000400540 KIF27Q86VH2 1401 aa21.07■□□□□ 0.96
LINC00544-201ENST00000400540 ABCC10Q5T3U5 1492 aa21.06■□□□□ 0.96
LINC00544-201ENST00000400540 TSPOAP1O95153 1857 aa21.04■□□□□ 0.96
LINC00544-201ENST00000400540 FAM69CQ0P6D2 419 aa20.99■□□□□ 0.95
LINC00544-201ENST00000400540 NPM1P06748 294 aaKnown RBP eCLIP20.97■□□□□ 0.95
LINC00544-201ENST00000400540 KDM6BO15054 1643 aa20.94■□□□□ 0.94
LINC00544-201ENST00000400540 IQGAP2Q13576 1575 aa20.93■□□□□ 0.94
LINC00544-201ENST00000400540 CARMIL1Q5VZK9 1371 aa20.93■□□□□ 0.94
LINC00544-201ENST00000400540 TTBK1Q5TCY1 1321 aaPredicted RBP20.88■□□□□ 0.93
LINC00544-201ENST00000400540 PTPRGP23470 1445 aa20.87■□□□□ 0.93
LINC00544-201ENST00000400540 PPRC1Q5VV67 1664 aaKnown RBP20.86■□□□□ 0.93
LINC00544-201ENST00000400540 ABCC2Q92887 1545 aa20.84■□□□□ 0.93
LINC00544-201ENST00000400540 CARMIL2Q6F5E8 1435 aa20.84■□□□□ 0.93
LINC00544-201ENST00000400540 TNIKQ9UKE5 1360 aa20.84■□□□□ 0.93
LINC00544-201ENST00000400540 DISP1Q96F81 1524 aa20.83■□□□□ 0.92
LINC00544-201ENST00000400540 ASXL2Q76L83 1435 aa20.78■□□□□ 0.92
LINC00544-201ENST00000400540 CTTNBP2Q8WZ74 1663 aa20.78■□□□□ 0.92
LINC00544-201ENST00000400540 GLI2P10070 1586 aa20.77■□□□□ 0.92
LINC00544-201ENST00000400540 UHRF1BP1LA0JNW5 1464 aa20.77■□□□□ 0.92
LINC00544-201ENST00000400540 KIAA0556O60303 1618 aa20.77■□□□□ 0.92
LINC00544-201ENST00000400540 ZCCHC11Q5TAX3 1644 aaKnown RBP20.77■□□□□ 0.92
LINC00544-201ENST00000400540 RAPGEF2Q9Y4G8 1499 aa20.76■□□□□ 0.91
LINC00544-201ENST00000400540 UGGT2Q9NYU1 1516 aa20.76■□□□□ 0.91
LINC00544-201ENST00000400540 UACAQ9BZF9 1416 aa20.75■□□□□ 0.91
LINC00544-201ENST00000400540 PLB1Q6P1J6 1458 aa20.74■□□□□ 0.91
LINC00544-201ENST00000400540 MAP3K4Q9Y6R4 1608 aa20.72■□□□□ 0.91
LINC00544-201ENST00000400540 KDM5BQ9UGL1 1544 aa20.7■□□□□ 0.9
LINC00544-201ENST00000400540 KDM4FA0A1W2PPD8 638 aa20.69■□□□□ 0.9
LINC00544-201ENST00000400540 EPRSP07814 1512 aaKnown RBP20.68■□□□□ 0.9
LINC00544-201ENST00000400540 COL17A1Q9UMD9 1497 aaPredicted RBP20.61■□□□□ 0.89
LINC00544-201ENST00000400540 ABCA8O94911 1581 aa20.57■□□□□ 0.88
LINC00544-201ENST00000400540 WDR7Q9Y4E6 1490 aa20.56■□□□□ 0.88
LINC00544-201ENST00000400540 ADGRL1O94910 1474 aa20.56■□□□□ 0.88
LINC00544-201ENST00000400540 TEX14Q8IWB6 1497 aa20.56■□□□□ 0.88
LINC00544-201ENST00000400540 CFAP43Q8NDM7 1665 aa20.54■□□□□ 0.88
LINC00544-201ENST00000400540 GOLGA3Q08378 1498 aa20.53■□□□□ 0.88
LINC00544-201ENST00000400540 PRXQ9BXM0 1461 aa20.52■□□□□ 0.88
LINC00544-201ENST00000400540 MAGI3Q5TCQ9 1506 aa20.43■□□□□ 0.86
LINC00544-201ENST00000400540 CD109Q6YHK3 1445 aa20.42■□□□□ 0.86
LINC00544-201ENST00000400540 KIF21BO75037 1637 aa20.4■□□□□ 0.86
LINC00544-201ENST00000400540 SAMD9Q5K651 1589 aa20.4■□□□□ 0.86
LINC00544-201ENST00000400540 KCNH8Q96L42 1107 aa20.4■□□□□ 0.86
LINC00544-201ENST00000400540 HECW2Q9P2P5 1572 aa20.37■□□□□ 0.85
LINC00544-201ENST00000400540 ARID3CA6NKF2 412 aa20.36■□□□□ 0.85
LINC00544-201ENST00000400540 P3H3Q8IVL6 736 aa20.35■□□□□ 0.85
LINC00544-201ENST00000400540 RAPGEF6Q8TEU7 1601 aa20.35■□□□□ 0.85
LINC00544-201ENST00000400540 ATP10BO94823 1461 aa20.34■□□□□ 0.85
LINC00544-201ENST00000400540 ABCA9Q8IUA7 1624 aa20.34■□□□□ 0.85
LINC00544-201ENST00000400540 ARAP3Q8WWN8 1544 aa20.27■□□□□ 0.84
LINC00544-201ENST00000400540 CSRNP3Q8WYN3 585 aa20.24■□□□□ 0.83
LINC00544-201ENST00000400540 FRMPD1Q5SYB0 1578 aa20.22■□□□□ 0.83
LINC00544-201ENST00000400540 NUP153P49790 1475 aaKnown RBP20.22■□□□□ 0.83
LINC00544-201ENST00000400540 ILDR1Q86SU0 546 aaPredicted RBP20.2■□□□□ 0.82
LINC00544-201ENST00000400540 FHOD3Q2V2M9 1422 aa20.19■□□□□ 0.82
LINC00544-201ENST00000400540 ADAMTSL3P82987 1691 aa20.19■□□□□ 0.82
LINC00544-201ENST00000400540 RANGAP1P46060 587 aaPredicted RBP20.18■□□□□ 0.82
LINC00544-201ENST00000400540 FAM9AQ8IZU1 332 aaPredicted RBP20.18■□□□□ 0.82
LINC00544-201ENST00000400540 EEA1Q15075 1411 aa20.16■□□□□ 0.82
LINC00544-201ENST00000400540 NEO1Q92859 1461 aa20.16■□□□□ 0.82
LINC00544-201ENST00000400540 BCORL1Q5H9F3 1711 aa20.15■□□□□ 0.82
LINC00544-201ENST00000400540 RICTORQ6R327 1708 aa20.15■□□□□ 0.82
LINC00544-201ENST00000400540 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.14■□□□□ 0.81
LINC00544-201ENST00000400540 HNRNPUL2Q1KMD3 747 aaKnown RBP20.14■□□□□ 0.81
LINC00544-201ENST00000400540 RAPGEF3O95398 923 aa20.13■□□□□ 0.81
LINC00544-201ENST00000400540 PHLDB1Q86UU1 1377 aa20.12■□□□□ 0.81
LINC00544-201ENST00000400540 TTC37Q6PGP7 1564 aa20.12■□□□□ 0.81
LINC00544-201ENST00000400540 MADDQ8WXG6 1647 aa20.11■□□□□ 0.81
LINC00544-201ENST00000400540 EFCAB5A4FU69 1503 aa20.11■□□□□ 0.81
LINC00544-201ENST00000400540 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.09■□□□□ 0.81
LINC00544-201ENST00000400540 ARHGEF40Q8TER5 1519 aa20.09■□□□□ 0.81
LINC00544-201ENST00000400540 CFAP74Q9C0B2 1584 aa20.08■□□□□ 0.81
LINC00544-201ENST00000400540 PTPRMP28827 1452 aa20.08■□□□□ 0.81
LINC00544-201ENST00000400540 SIGLEC1Q9BZZ2 1709 aa20.06■□□□□ 0.8
LINC00544-201ENST00000400540 RIMS1Q86UR5 1692 aaKnown RBP20.06■□□□□ 0.8
LINC00544-201ENST00000400540 CDK13Q14004 1512 aaKnown RBP20.05■□□□□ 0.8
LINC00544-201ENST00000400540 FANCAO15360 1455 aa20.02■□□□□ 0.8
LINC00544-201ENST00000400540 DENND4BO75064 1496 aaPredicted RBP20.01■□□□□ 0.79
LINC00544-201ENST00000400540 AKNAQ7Z591 1439 aa20.01■□□□□ 0.79
LINC00544-201ENST00000400540 ZMYM4Q5VZL5 1548 aa19.99■□□□□ 0.79
LINC00544-201ENST00000400540 PLEKHD1A6NEE1 506 aa19.99■□□□□ 0.79
LINC00544-201ENST00000400540 LRRIQ1Q96JM4 1722 aa19.98■□□□□ 0.79
LINC00544-201ENST00000400540 MYO5CQ9NQX4 1742 aa19.97■□□□□ 0.79
LINC00544-201ENST00000400540 ARID4BQ4LE39 1312 aaPredicted RBP19.97■□□□□ 0.79
LINC00544-201ENST00000400540 PCF11O94913 1555 aaKnown RBP19.96■□□□□ 0.79
LINC00544-201ENST00000400540 HECW1Q76N89 1606 aa19.96■□□□□ 0.79
LINC00544-201ENST00000400540 ZFYVE16Q7Z3T8 1539 aa19.96■□□□□ 0.79
LINC00544-201ENST00000400540 EHMT2Q96KQ7 1210 aa19.95■□□□□ 0.78
LINC00544-201ENST00000400540 FER1L4A9Z1Z3 1794 aa19.94■□□□□ 0.78
LINC00544-201ENST00000400540 KIF14Q15058 1648 aa19.94■□□□□ 0.78
LINC00544-201ENST00000400540 LMTK3Q96Q04 1460 aa19.93■□□□□ 0.78
LINC00544-201ENST00000400540 YEATS2Q9ULM3 1422 aa19.93■□□□□ 0.78
LINC00544-201ENST00000400540 ARHGAP35Q9NRY4 1499 aa19.91■□□□□ 0.78
LINC00544-201ENST00000400540 POGZQ7Z3K3 1410 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms