RNA–Protein interactions for RNA: ENST00000399953.7

NPRL3-201, Transcript of NPR3 like, GATOR1 complex subunit, humanhuman

TSL 1 (best) BASIC

Gene NPRL3, Length 2,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPRL3-201ENST00000399953 IPO9Q96P70 1041 aaKnown RBP22.85■■□□□ 1.25
NPRL3-201ENST00000399953 ANP32AP39687 249 aaKnown RBP22.84■■□□□ 1.25
NPRL3-201ENST00000399953 WASHC2AQ641Q2 1341 aa22.84■■□□□ 1.25
NPRL3-201ENST00000399953 MAPKBP1O60336 1514 aa22.83■■□□□ 1.25
NPRL3-201ENST00000399953 HNRNPUQ00839 825 aaKnown RBP eCLIP22.83■■□□□ 1.25
NPRL3-201ENST00000399953 RRBP1Q9P2E9 1410 aaKnown RBP22.82■■□□□ 1.24
NPRL3-201ENST00000399953 BAZ1BQ9UIG0 1483 aaKnown RBP22.82■■□□□ 1.24
NPRL3-201ENST00000399953 C11orf95C9JLR9 678 aaPredicted RBP22.81■■□□□ 1.24
NPRL3-201ENST00000399953 ZBTB47Q9UFB7 747 aaPredicted RBP22.81■■□□□ 1.24
NPRL3-201ENST00000399953 B4GALNT3Q6L9W6 998 aa22.78■■□□□ 1.24
NPRL3-201ENST00000399953 PKNOX2Q96KN3 472 aa22.78■■□□□ 1.24
NPRL3-201ENST00000399953 EIF5BO60841 1220 aaKnown RBP22.75■■□□□ 1.23
NPRL3-201ENST00000399953 TOP2AP11388 1531 aaKnown RBP22.73■■□□□ 1.23
NPRL3-201ENST00000399953 WASHC2CQ9Y4E1 1318 aa22.72■■□□□ 1.23
NPRL3-201ENST00000399953 USP35Q9P2H5 1018 aa22.71■■□□□ 1.23
NPRL3-201ENST00000399953 SMARCA2P51531 1590 aa22.68■■□□□ 1.22
NPRL3-201ENST00000399953 RAB3GAP2Q9H2M9 1393 aa22.68■■□□□ 1.22
NPRL3-201ENST00000399953 CCNB3Q8WWL7 1395 aa22.66■■□□□ 1.22
NPRL3-201ENST00000399953 TIMELESSQ9UNS1 1208 aa22.66■■□□□ 1.22
NPRL3-201ENST00000399953 HIRIP3Q9BW71 556 aaPredicted RBP22.65■■□□□ 1.22
NPRL3-201ENST00000399953 KANK4Q5T7N3 995 aaPredicted RBP22.63■■□□□ 1.21
NPRL3-201ENST00000399953 NEFMP07197 916 aa22.61■■□□□ 1.21
NPRL3-201ENST00000399953 RAPGEF2Q9Y4G8 1499 aa22.6■■□□□ 1.21
NPRL3-201ENST00000399953 SIN3AQ96ST3 1273 aa22.58■■□□□ 1.21
NPRL3-201ENST00000399953 RANGAP1P46060 587 aaPredicted RBP22.56■■□□□ 1.2
NPRL3-201ENST00000399953 BRPF3Q9ULD4 1205 aa22.56■■□□□ 1.2
NPRL3-201ENST00000399953 RSPH6AQ9H0K4 717 aa22.55■■□□□ 1.2
NPRL3-201ENST00000399953 ARAP1Q96P48 1450 aa22.51■■□□□ 1.19
NPRL3-201ENST00000399953 SETD5Q9C0A6 1442 aa22.51■■□□□ 1.19
NPRL3-201ENST00000399953 PPM1GO15355 546 aaPredicted RBP22.5■■□□□ 1.19
NPRL3-201ENST00000399953 LAS1LQ9Y4W2 734 aaKnown RBP22.49■■□□□ 1.19
NPRL3-201ENST00000399953 SYNJ1O43426 1573 aa22.48■■□□□ 1.19
NPRL3-201ENST00000399953 GLIPR1L2Q4G1C9 344 aa22.46■■□□□ 1.19
NPRL3-201ENST00000399953 NCAPD3P42695 1498 aa22.46■■□□□ 1.19
NPRL3-201ENST00000399953 ZBED9Q6R2W3 1325 aa22.44■■□□□ 1.18
NPRL3-201ENST00000399953 GSE1Q14687 1217 aa22.44■■□□□ 1.18
NPRL3-201ENST00000399953 PEG3Q9GZU2 1588 aa22.4■■□□□ 1.18
NPRL3-201ENST00000399953 UNC13AQ9UPW8 1703 aa22.38■■□□□ 1.17
NPRL3-201ENST00000399953 NPM2Q86SE8 214 aaKnown RBP22.35■■□□□ 1.17
NPRL3-201ENST00000399953 FAM43AQ8N2R8 423 aa22.35■■□□□ 1.17
NPRL3-201ENST00000399953 ERICH3Q5RHP9 1530 aa22.3■■□□□ 1.16
NPRL3-201ENST00000399953 TONSLQ96HA7 1378 aa22.29■■□□□ 1.16
NPRL3-201ENST00000399953 SMARCA4P51532 1647 aa22.29■■□□□ 1.16
NPRL3-201ENST00000399953 CCDC184Q52MB2 194 aa22.28■■□□□ 1.16
NPRL3-201ENST00000399953 FAM9BQ8IZU0 186 aa22.28■■□□□ 1.16
NPRL3-201ENST00000399953 ZMYND15Q9H091 742 aa22.28■■□□□ 1.16
NPRL3-201ENST00000399953 FHAD1B1AJZ9 1412 aa22.27■■□□□ 1.16
NPRL3-201ENST00000399953 SMG6Q86US8 1419 aaKnown RBP22.27■■□□□ 1.16
NPRL3-201ENST00000399953 RNF123Q5XPI4 1314 aa22.27■■□□□ 1.15
NPRL3-201ENST00000399953 AKNAQ7Z591 1439 aa22.26■■□□□ 1.15
NPRL3-201ENST00000399953 FRAT1Q92837 279 aaPredicted RBP22.26■■□□□ 1.15
NPRL3-201ENST00000399953 VSIG10Q8N0Z9 540 aa22.24■■□□□ 1.15
NPRL3-201ENST00000399953 TCERG1O14776 1098 aaKnown RBP22.23■■□□□ 1.15
NPRL3-201ENST00000399953 MRS2Q9HD23 443 aa22.21■■□□□ 1.15
NPRL3-201ENST00000399953 PODXL2Q9NZ53 605 aa22.21■■□□□ 1.15
NPRL3-201ENST00000399953 NFKBIBQ15653 356 aa22.2■■□□□ 1.14
NPRL3-201ENST00000399953 CNTLNQ9NXG0 1405 aa22.2■■□□□ 1.14
NPRL3-201ENST00000399953 PDE4AP27815 886 aa22.2■■□□□ 1.14
NPRL3-201ENST00000399953 NCOA2Q15596 1464 aa22.19■■□□□ 1.14
NPRL3-201ENST00000399953 DDRGK1Q96HY6 314 aa22.18■■□□□ 1.14
NPRL3-201ENST00000399953 BICRAQ9NZM4 1560 aa22.18■■□□□ 1.14
NPRL3-201ENST00000399953 NUDCQ9Y266 331 aa22.17■■□□□ 1.14
NPRL3-201ENST00000399953 BACH2Q9BYV9 841 aa22.16■■□□□ 1.14
NPRL3-201ENST00000399953 PRKRIP1Q9H875 184 aaPredicted RBP22.16■■□□□ 1.14
NPRL3-201ENST00000399953 PRXQ9BXM0 1461 aa22.15■■□□□ 1.14
NPRL3-201ENST00000399953 MS4A1P11836 297 aa22.12■■□□□ 1.13
NPRL3-201ENST00000399953 PLEKHG5O94827 1062 aa22.12■■□□□ 1.13
NPRL3-201ENST00000399953 MAP3K1Q13233 1512 aa22.11■■□□□ 1.13
NPRL3-201ENST00000399953 TIAM1Q13009 1591 aa22.1■■□□□ 1.13
NPRL3-201ENST00000399953 FAM50AQ14320 339 aaKnown RBP22.09■■□□□ 1.13
NPRL3-201ENST00000399953 HSPA5P11021 654 aaKnown RBP22.07■■□□□ 1.12
NPRL3-201ENST00000399953 DCAF11Q8TEB1 546 aa22.07■■□□□ 1.12
NPRL3-201ENST00000399953 ARHGAP35Q9NRY4 1499 aa22.07■■□□□ 1.12
NPRL3-201ENST00000399953 PHLDB1Q86UU1 1377 aa22.05■■□□□ 1.12
NPRL3-201ENST00000399953 KDM5BQ9UGL1 1544 aa22.03■■□□□ 1.12
NPRL3-201ENST00000399953 RRP9O43818 475 aaKnown RBP22.02■■□□□ 1.12
NPRL3-201ENST00000399953 HSP90AA2PQ14568 343 aaPredicted RBP22.01■■□□□ 1.11
NPRL3-201ENST00000399953 LRRC9Q6ZRR7 1453 aa22.01■■□□□ 1.11
NPRL3-201ENST00000399953 SLC24A1O60721 1099 aa21.99■■□□□ 1.11
NPRL3-201ENST00000399953 EIF4G2P78344 907 aaKnown RBP eCLIP21.98■■□□□ 1.111e-6■■■■□ 25
NPRL3-201ENST00000399953 TOP2BQ02880 1626 aa21.98■■□□□ 1.11
NPRL3-201ENST00000399953 DAXXQ9UER7 740 aaPredicted RBP21.98■■□□□ 1.11
NPRL3-201ENST00000399953 RRAGDQ9NQL2 400 aaPredicted RBP21.97■■□□□ 1.11
NPRL3-201ENST00000399953 CCDC7Q96M83 1385 aa21.95■■□□□ 1.1
NPRL3-201ENST00000399953 NCOA1Q15788 1441 aa21.94■■□□□ 1.1
NPRL3-201ENST00000399953 UACAQ9BZF9 1416 aa21.94■■□□□ 1.1
NPRL3-201ENST00000399953 HSP90AA1P07900 732 aaKnown RBP21.93■■□□□ 1.1
NPRL3-201ENST00000399953 CCDC18Q5T9S5 1454 aa21.92■■□□□ 1.1
NPRL3-201ENST00000399953 FRAT2O75474 233 aaPredicted RBP21.91■■□□□ 1.1
NPRL3-201ENST00000399953 EXOC6Q8TAG9 804 aa21.9■■□□□ 1.1
NPRL3-201ENST00000399953 NAP1L5Q96NT1 182 aaPredicted RBP21.9■■□□□ 1.1
NPRL3-201ENST00000399953 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.89■■□□□ 1.18e-7■□□□□ 10.8
NPRL3-201ENST00000399953 SLC4A3P48751 1232 aa21.89■■□□□ 1.1
NPRL3-201ENST00000399953 RRP1P56182 461 aaKnown RBP21.88■■□□□ 1.09
NPRL3-201ENST00000399953 ATAD2BQ9ULI0 1458 aa21.87■■□□□ 1.09
NPRL3-201ENST00000399953 BIVM-ERCC5R4GMW8 1640 aa21.86■■□□□ 1.09
NPRL3-201ENST00000399953 ABCA5Q8WWZ7 1642 aa21.85■■□□□ 1.09
NPRL3-201ENST00000399953 CFAP43Q8NDM7 1665 aa21.84■■□□□ 1.09
NPRL3-201ENST00000399953 PNNQ9H307 717 aaKnown RBP21.84■■□□□ 1.09
NPRL3-201ENST00000399953 L1TD1Q5T7N2 865 aaKnown RBP21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms