RNA–Protein interactions for RNA: ENST00000399866.3

LINC02449-202, Transcript of long intergenic non-protein coding RNA 2449, humanhuman

TSL 3 BASIC

Gene LINC02449, Length 517 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02449-202ENST00000399866 FHAD1B1AJZ9 1412 aa13.5□□□□□ -0.25
LINC02449-202ENST00000399866 EFCAB5A4FU69 1503 aa13.47□□□□□ -0.25
LINC02449-202ENST00000399866 PPARGC1BQ86YN6 1023 aaKnown RBP13.46□□□□□ -0.25
LINC02449-202ENST00000399866 SNAPC4Q5SXM2 1469 aa13.46□□□□□ -0.25
LINC02449-202ENST00000399866 MAGI1Q96QZ7 1491 aaPredicted RBP13.42□□□□□ -0.26
LINC02449-202ENST00000399866 SAMD9Q5K651 1589 aa13.42□□□□□ -0.26
LINC02449-202ENST00000399866 IQGAP2Q13576 1575 aa13.39□□□□□ -0.27
LINC02449-202ENST00000399866 GRIN2AQ12879 1464 aa13.38□□□□□ -0.27
LINC02449-202ENST00000399866 FHOD3Q2V2M9 1422 aa13.38□□□□□ -0.27
LINC02449-202ENST00000399866 PCF11O94913 1555 aaKnown RBP13.37□□□□□ -0.27
LINC02449-202ENST00000399866 SYNJ2O15056 1496 aa13.36□□□□□ -0.27
LINC02449-202ENST00000399866 APLP2Q06481 763 aa13.36□□□□□ -0.27
LINC02449-202ENST00000399866 TTBK1Q5TCY1 1321 aaPredicted RBP13.35□□□□□ -0.27
LINC02449-202ENST00000399866 CFAP43Q8NDM7 1665 aa13.34□□□□□ -0.27
LINC02449-202ENST00000399866 MAP3K1Q13233 1512 aa13.34□□□□□ -0.27
LINC02449-202ENST00000399866 FYCO1Q9BQS8 1478 aa13.33□□□□□ -0.28
LINC02449-202ENST00000399866 TIAM1Q13009 1591 aa13.32□□□□□ -0.28
LINC02449-202ENST00000399866 KIAA0586Q9BVV6 1533 aa13.32□□□□□ -0.28
LINC02449-202ENST00000399866 UGGT2Q9NYU1 1516 aa13.32□□□□□ -0.28
LINC02449-202ENST00000399866 P3H3Q8IVL6 736 aa13.31□□□□□ -0.28
LINC02449-202ENST00000399866 CEP170Q5SW79 1584 aa13.31□□□□□ -0.28
LINC02449-202ENST00000399866 FMN1Q68DA7 1419 aa13.3□□□□□ -0.28
LINC02449-202ENST00000399866 CASKIN1Q8WXD9 1431 aa13.3□□□□□ -0.28
LINC02449-202ENST00000399866 NUP160Q12769 1436 aa13.28□□□□□ -0.28
LINC02449-202ENST00000399866 KIAA0556O60303 1618 aa13.26□□□□□ -0.29
LINC02449-202ENST00000399866 CHMP7Q8WUX9 453 aaPredicted RBP13.26□□□□□ -0.29
LINC02449-202ENST00000399866 KANK4Q5T7N3 995 aaPredicted RBP13.25□□□□□ -0.29
LINC02449-202ENST00000399866 HRCP23327 699 aa13.24□□□□□ -0.29
LINC02449-202ENST00000399866 DISP1Q96F81 1524 aa13.23□□□□□ -0.29
LINC02449-202ENST00000399866 LRRC9Q6ZRR7 1453 aa13.23□□□□□ -0.29
LINC02449-202ENST00000399866 CHD1O14646 1710 aa13.23□□□□□ -0.29
LINC02449-202ENST00000399866 LRRIQ1Q96JM4 1722 aa13.22□□□□□ -0.29
LINC02449-202ENST00000399866 HECW1Q76N89 1606 aa13.21□□□□□ -0.29
LINC02449-202ENST00000399866 FBLN2P98095 1184 aa13.21□□□□□ -0.29
LINC02449-202ENST00000399866 CCDC18Q5T9S5 1454 aa13.17□□□□□ -0.3
LINC02449-202ENST00000399866 RRBP1Q9P2E9 1410 aaKnown RBP13.17□□□□□ -0.3
LINC02449-202ENST00000399866 ATP1B4Q9UN42 357 aaPredicted RBP13.16□□□□□ -0.3
LINC02449-202ENST00000399866 EHBP1L1Q8N3D4 1523 aa13.14□□□□□ -0.31
LINC02449-202ENST00000399866 RAPGEF6Q8TEU7 1601 aa13.14□□□□□ -0.31
LINC02449-202ENST00000399866 CARMIL2Q6F5E8 1435 aa13.13□□□□□ -0.31
LINC02449-202ENST00000399866 SHROOM2Q13796 1616 aa13.12□□□□□ -0.31
LINC02449-202ENST00000399866 EPRSP07814 1512 aaKnown RBP13.12□□□□□ -0.31
LINC02449-202ENST00000399866 PHLDB1Q86UU1 1377 aa13.1□□□□□ -0.31
LINC02449-202ENST00000399866 CCNB3Q8WWL7 1395 aa13.1□□□□□ -0.31
LINC02449-202ENST00000399866 CDK13Q14004 1512 aaKnown RBP13.1□□□□□ -0.31
LINC02449-202ENST00000399866 MAGI3Q5TCQ9 1506 aa13.1□□□□□ -0.31
LINC02449-202ENST00000399866 JPH4Q96JJ6 628 aa13.1□□□□□ -0.31
LINC02449-202ENST00000399866 MTUS2Q5JR59 1369 aa13.09□□□□□ -0.31
LINC02449-202ENST00000399866 SUPT6HQ7KZ85 1726 aaKnown RBP13.09□□□□□ -0.31
LINC02449-202ENST00000399866 NUP153P49790 1475 aaKnown RBP13.09□□□□□ -0.31
LINC02449-202ENST00000399866 CLASP1Q7Z460 1538 aa13.08□□□□□ -0.31
LINC02449-202ENST00000399866 PRG4Q92954 1404 aaPredicted RBP13.06□□□□□ -0.32
LINC02449-202ENST00000399866 NCOA2Q15596 1464 aa13.06□□□□□ -0.32
LINC02449-202ENST00000399866 HNRNPUL2Q1KMD3 747 aaKnown RBP13.06□□□□□ -0.32
LINC02449-202ENST00000399866 ARHGEF11O15085 1522 aa13.06□□□□□ -0.32
LINC02449-202ENST00000399866 ABCA8O94911 1581 aa13.06□□□□□ -0.32
LINC02449-202ENST00000399866 PLB1Q6P1J6 1458 aa13.05□□□□□ -0.32
LINC02449-202ENST00000399866 ZEB1P37275 1124 aaPredicted RBP13.03□□□□□ -0.32
LINC02449-202ENST00000399866 FGD6Q6ZV73 1430 aa13.03□□□□□ -0.32
LINC02449-202ENST00000399866 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.01□□□□□ -0.33
LINC02449-202ENST00000399866 MYOM3Q5VTT5 1437 aa13.01□□□□□ -0.33
LINC02449-202ENST00000399866 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13□□□□□ -0.33
LINC02449-202ENST00000399866 ERCC6L2Q5T890 1561 aa12.99□□□□□ -0.33
LINC02449-202ENST00000399866 CCER1Q8TC90 406 aaPredicted RBP12.99□□□□□ -0.33
LINC02449-202ENST00000399866 PTPRGP23470 1445 aa12.98□□□□□ -0.33
LINC02449-202ENST00000399866 ARID3CA6NKF2 412 aa12.98□□□□□ -0.33
LINC02449-202ENST00000399866 ADCY10Q96PN6 1610 aa12.98□□□□□ -0.33
LINC02449-202ENST00000399866 PTPN23Q9H3S7 1636 aa12.97□□□□□ -0.33
LINC02449-202ENST00000399866 TROQ12816 1431 aaPredicted RBP12.96□□□□□ -0.34
LINC02449-202ENST00000399866 FAM50AQ14320 339 aaKnown RBP12.95□□□□□ -0.34
LINC02449-202ENST00000399866 TCOF1Q13428 1488 aaKnown RBP12.95□□□□□ -0.34
LINC02449-202ENST00000399866 ATP10BO94823 1461 aa12.93□□□□□ -0.34
LINC02449-202ENST00000399866 CDK11AQ9UQ88 783 aaPredicted RBP12.93□□□□□ -0.34
LINC02449-202ENST00000399866 ABCC2Q92887 1545 aa12.93□□□□□ -0.34
LINC02449-202ENST00000399866 KIF14Q15058 1648 aa12.92□□□□□ -0.34
LINC02449-202ENST00000399866 ITGAEP38570 1179 aa12.92□□□□□ -0.34
LINC02449-202ENST00000399866 MIA2Q96PC5 1412 aa12.92□□□□□ -0.34
LINC02449-202ENST00000399866 UACAQ9BZF9 1416 aa12.92□□□□□ -0.34
LINC02449-202ENST00000399866 ITSN2Q9NZM3 1697 aa12.91□□□□□ -0.34
LINC02449-202ENST00000399866 UHRF1BP1LA0JNW5 1464 aa12.88□□□□□ -0.35
LINC02449-202ENST00000399866 SETD5Q9C0A6 1442 aa12.88□□□□□ -0.35
LINC02449-202ENST00000399866 ABCC10Q5T3U5 1492 aa12.86□□□□□ -0.35
LINC02449-202ENST00000399866 DHX57Q6P158 1386 aaKnown RBP12.86□□□□□ -0.35
LINC02449-202ENST00000399866 RAB3GAP2Q9H2M9 1393 aa12.86□□□□□ -0.35
LINC02449-202ENST00000399866 PTPRKQ15262 1439 aa12.86□□□□□ -0.35
LINC02449-202ENST00000399866 ZCCHC11Q5TAX3 1644 aaKnown RBP12.84□□□□□ -0.35
LINC02449-202ENST00000399866 DNMT1P26358 1616 aaKnown RBP12.84□□□□□ -0.35
LINC02449-202ENST00000399866 GPATCH8Q9UKJ3 1502 aaKnown RBP12.83□□□□□ -0.35
LINC02449-202ENST00000399866 CDC42BPAQ5VT25 1732 aa12.83□□□□□ -0.36
LINC02449-202ENST00000399866 PLEKHD1A6NEE1 506 aa12.83□□□□□ -0.36
LINC02449-202ENST00000399866 GCC2Q8IWJ2 1684 aa12.83□□□□□ -0.36
LINC02449-202ENST00000399866 HFM1A2PYH4 1435 aa12.82□□□□□ -0.36
LINC02449-202ENST00000399866 CAMSAP2Q08AD1 1489 aa12.82□□□□□ -0.36
LINC02449-202ENST00000399866 KDM5BQ9UGL1 1544 aa12.82□□□□□ -0.36
LINC02449-202ENST00000399866 AKNAQ7Z591 1439 aa12.81□□□□□ -0.36
LINC02449-202ENST00000399866 OSCARQ8IYS5 282 aa12.8□□□□□ -0.36
LINC02449-202ENST00000399866 CLSPNQ9HAW4 1339 aa12.8□□□□□ -0.36
LINC02449-202ENST00000399866 PREX2Q70Z35 1606 aa12.8□□□□□ -0.36
LINC02449-202ENST00000399866 DAPK1P53355 1430 aa12.79□□□□□ -0.36
LINC02449-202ENST00000399866 CROCC2H7BZ55 1655 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms