RNA–Protein interactions for RNA: ENST00000399793.6

RETREG1-202, Transcript of reticulophagy regulator 1, humanhuman

TSL 1 (best) BASIC

Gene RETREG1, Length 3,145 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-202ENST00000399793 VSIG10Q8N0Z9 540 aa11.96□□□□□ -0.5
RETREG1-202ENST00000399793 HNRNPUQ00839 825 aaKnown RBP eCLIP11.95□□□□□ -0.5
RETREG1-202ENST00000399793 USP35Q9P2H5 1018 aa11.95□□□□□ -0.5
RETREG1-202ENST00000399793 ABCC8Q09428 1581 aa11.94□□□□□ -0.5
RETREG1-202ENST00000399793 LAS1LQ9Y4W2 734 aaKnown RBP11.91□□□□□ -0.5
RETREG1-202ENST00000399793 CCDC88BA6NC98 1476 aa11.91□□□□□ -0.5
RETREG1-202ENST00000399793 SOGA1O94964 1423 aa11.9□□□□□ -0.5
RETREG1-202ENST00000399793 EEA1Q15075 1411 aa11.88□□□□□ -0.51
RETREG1-202ENST00000399793 GSE1Q14687 1217 aa11.87□□□□□ -0.51
RETREG1-202ENST00000399793 EIF4G1Q04637 1599 aaKnown RBP11.86□□□□□ -0.51
RETREG1-202ENST00000399793 GOLGA3Q08378 1498 aa11.86□□□□□ -0.51
RETREG1-202ENST00000399793 HIRIP3Q9BW71 556 aaPredicted RBP11.86□□□□□ -0.51
RETREG1-202ENST00000399793 CLIP1P30622 1438 aa11.86□□□□□ -0.51
RETREG1-202ENST00000399793 WDR97A6NE52 1622 aa11.85□□□□□ -0.51
RETREG1-202ENST00000399793 VPS8Q8N3P4 1428 aa11.84□□□□□ -0.51
RETREG1-202ENST00000399793 FAM43AQ8N2R8 423 aa11.84□□□□□ -0.51
RETREG1-202ENST00000399793 PPM1GO15355 546 aaPredicted RBP11.83□□□□□ -0.52
RETREG1-202ENST00000399793 RUSC2Q8N2Y8 1516 aa11.83□□□□□ -0.52
RETREG1-202ENST00000399793 NPM2Q86SE8 214 aaKnown RBP11.81□□□□□ -0.52
RETREG1-202ENST00000399793 SIN3AQ96ST3 1273 aa11.8□□□□□ -0.52
RETREG1-202ENST00000399793 FRAT1Q92837 279 aaPredicted RBP11.8□□□□□ -0.52
RETREG1-202ENST00000399793 MAPKBP1O60336 1514 aa11.78□□□□□ -0.52
RETREG1-202ENST00000399793 CUX2O14529 1486 aa11.77□□□□□ -0.53
RETREG1-202ENST00000399793 A0A0U1RQG5 324 aaPredicted RBP11.74□□□□□ -0.53
RETREG1-202ENST00000399793 HSP90AA2PQ14568 343 aaPredicted RBP11.74□□□□□ -0.53
RETREG1-202ENST00000399793 SCRIBQ14160 1630 aa11.74□□□□□ -0.53
RETREG1-202ENST00000399793 DCAF11Q8TEB1 546 aa11.73□□□□□ -0.53
RETREG1-202ENST00000399793 NFKBIBQ15653 356 aa11.73□□□□□ -0.53
RETREG1-202ENST00000399793 CEP164Q9UPV0 1460 aa11.72□□□□□ -0.53
RETREG1-202ENST00000399793 WIZO95785 1651 aa11.72□□□□□ -0.53
RETREG1-202ENST00000399793 BAZ1BQ9UIG0 1483 aaKnown RBP11.72□□□□□ -0.53
RETREG1-202ENST00000399793 NCAPD3P42695 1498 aa11.71□□□□□ -0.53
RETREG1-202ENST00000399793 MROH2BQ7Z745 1585 aa11.71□□□□□ -0.53
RETREG1-202ENST00000399793 RRP9O43818 475 aaKnown RBP11.71□□□□□ -0.53
RETREG1-202ENST00000399793 RBM10P98175 930 aaKnown RBP11.71□□□□□ -0.53
RETREG1-202ENST00000399793 RAB3GAP2Q9H2M9 1393 aa11.69□□□□□ -0.54
RETREG1-202ENST00000399793 RRBP1Q9P2E9 1410 aaKnown RBP11.69□□□□□ -0.54
RETREG1-202ENST00000399793 CECR2Q9BXF3 1484 aa11.69□□□□□ -0.54
RETREG1-202ENST00000399793 RRAGDQ9NQL2 400 aaPredicted RBP11.69□□□□□ -0.54
RETREG1-202ENST00000399793 AAMPQ13685 434 aa11.68□□□□□ -0.54
RETREG1-202ENST00000399793 RANGAP1P46060 587 aaPredicted RBP11.67□□□□□ -0.54
RETREG1-202ENST00000399793 KANK4Q5T7N3 995 aaPredicted RBP11.67□□□□□ -0.54
RETREG1-202ENST00000399793 ZBED9Q6R2W3 1325 aa11.67□□□□□ -0.54
RETREG1-202ENST00000399793 KIF21BO75037 1637 aa11.67□□□□□ -0.54
RETREG1-202ENST00000399793 HSP90AA1P07900 732 aaKnown RBP11.66□□□□□ -0.54
RETREG1-202ENST00000399793 FGD1P98174 961 aa11.66□□□□□ -0.54
RETREG1-202ENST00000399793 CCDC184Q52MB2 194 aa11.66□□□□□ -0.54
RETREG1-202ENST00000399793 PDE4AP27815 886 aa11.66□□□□□ -0.54
RETREG1-202ENST00000399793 SMARCA2P51531 1590 aa11.65□□□□□ -0.54
RETREG1-202ENST00000399793 NAP1L5Q96NT1 182 aaPredicted RBP11.65□□□□□ -0.54
RETREG1-202ENST00000399793 PEG3Q9GZU2 1588 aa11.65□□□□□ -0.54
RETREG1-202ENST00000399793 AKNAQ7Z591 1439 aa11.65□□□□□ -0.54
RETREG1-202ENST00000399793 FAM9BQ8IZU0 186 aa11.64□□□□□ -0.55
RETREG1-202ENST00000399793 BACH2Q9BYV9 841 aa11.63□□□□□ -0.55
RETREG1-202ENST00000399793 CCNB3Q8WWL7 1395 aa11.63□□□□□ -0.55
RETREG1-202ENST00000399793 TCERG1O14776 1098 aaKnown RBP11.62□□□□□ -0.55
RETREG1-202ENST00000399793 PDE4CQ08493 712 aa11.62□□□□□ -0.55
RETREG1-202ENST00000399793 BAZ1AQ9NRL2 1556 aaPredicted RBP11.62□□□□□ -0.55
RETREG1-202ENST00000399793 DDRGK1Q96HY6 314 aa11.61□□□□□ -0.55
RETREG1-202ENST00000399793 RNF123Q5XPI4 1314 aa11.6□□□□□ -0.55
RETREG1-202ENST00000399793 SLC4A3P48751 1232 aa11.59□□□□□ -0.55
RETREG1-202ENST00000399793 FRAT2O75474 233 aaPredicted RBP11.58□□□□□ -0.56
RETREG1-202ENST00000399793 SMG6Q86US8 1419 aaKnown RBP11.58□□□□□ -0.56
RETREG1-202ENST00000399793 PNNQ9H307 717 aaKnown RBP11.58□□□□□ -0.56
RETREG1-202ENST00000399793 SETD5Q9C0A6 1442 aa11.57□□□□□ -0.56
RETREG1-202ENST00000399793 MRS2Q9HD23 443 aa11.56□□□□□ -0.56
RETREG1-202ENST00000399793 MS4A1P11836 297 aa11.55□□□□□ -0.56
RETREG1-202ENST00000399793 NUDCQ9Y266 331 aa11.55□□□□□ -0.56
RETREG1-202ENST00000399793 PRDM4Q9UKN5 801 aa11.54□□□□□ -0.56
RETREG1-202ENST00000399793 RAPGEF2Q9Y4G8 1499 aa11.54□□□□□ -0.56
RETREG1-202ENST00000399793 CLCN1P35523 988 aa11.52□□□□□ -0.56
RETREG1-202ENST00000399793 PRKRIP1Q9H875 184 aaPredicted RBP11.51□□□□□ -0.57
RETREG1-202ENST00000399793 CALD1Q05682 793 aaKnown RBP11.51□□□□□ -0.57
RETREG1-202ENST00000399793 RGS3P49796 1198 aa11.5□□□□□ -0.57
RETREG1-202ENST00000399793 TONSLQ96HA7 1378 aa11.5□□□□□ -0.57
RETREG1-202ENST00000399793 BCL11BQ9C0K0 894 aaPredicted RBP11.5□□□□□ -0.57
RETREG1-202ENST00000399793 ARAP1Q96P48 1450 aa11.5□□□□□ -0.57
RETREG1-202ENST00000399793 POGKQ9P215 609 aa11.49□□□□□ -0.57
RETREG1-202ENST00000399793 PDIA4P13667 645 aaKnown RBP11.49□□□□□ -0.57
RETREG1-202ENST00000399793 L1TD1Q5T7N2 865 aaKnown RBP11.48□□□□□ -0.57
RETREG1-202ENST00000399793 CNTLNQ9NXG0 1405 aa11.48□□□□□ -0.57
RETREG1-202ENST00000399793 EXOC6Q8TAG9 804 aa11.48□□□□□ -0.57
RETREG1-202ENST00000399793 CENPJQ9HC77 1338 aaPredicted RBP11.48□□□□□ -0.57
RETREG1-202ENST00000399793 PDCL3Q9H2J4 239 aa11.47□□□□□ -0.57
RETREG1-202ENST00000399793 FHAD1B1AJZ9 1412 aa11.47□□□□□ -0.57
RETREG1-202ENST00000399793 ARID4BQ4LE39 1312 aaPredicted RBP11.46□□□□□ -0.57
RETREG1-202ENST00000399793 SYNJ1O43426 1573 aa11.45□□□□□ -0.58
RETREG1-202ENST00000399793 NCOA2Q15596 1464 aa11.45□□□□□ -0.58
RETREG1-202ENST00000399793 HSPA5P11021 654 aaKnown RBP11.44□□□□□ -0.58
RETREG1-202ENST00000399793 SKAP1Q86WV1 359 aa11.44□□□□□ -0.58
RETREG1-202ENST00000399793 SENP3-EIF4A1A0A087X0R7 540 aa11.42□□□□□ -0.58
RETREG1-202ENST00000399793 TOP2AP11388 1531 aaKnown RBP11.42□□□□□ -0.58
RETREG1-202ENST00000399793 ARXQ96QS3 562 aa11.42□□□□□ -0.58
RETREG1-202ENST00000399793 XRCC6P12956 609 aaKnown RBP eCLIP11.41□□□□□ -0.58
RETREG1-202ENST00000399793 RRP1P56182 461 aaKnown RBP11.41□□□□□ -0.58
RETREG1-202ENST00000399793 TPM2P07951 284 aa11.4□□□□□ -0.59
RETREG1-202ENST00000399793 PANK2Q9BZ23 570 aa11.39□□□□□ -0.59
RETREG1-202ENST00000399793 FAM50AQ14320 339 aaKnown RBP11.38□□□□□ -0.59
RETREG1-202ENST00000399793 GOLGA6L3A6NEY3 463 aa11.35□□□□□ -0.59
RETREG1-202ENST00000399793 EIF4G2P78344 907 aaKnown RBP eCLIP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms