RNA–Protein interactions for RNA: ENST00000399295.2

SMIM11A-202, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM11A, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-202ENST00000399295 RAPGEF2Q9Y4G8 1499 aa29.24■■■□□ 2.27
SMIM11A-202ENST00000399295 KIAA0586Q9BVV6 1533 aa29.22■■■□□ 2.27
SMIM11A-202ENST00000399295 SHROOM2Q13796 1616 aa29.2■■■□□ 2.27
SMIM11A-202ENST00000399295 CSRNP3Q8WYN3 585 aa29.18■■■□□ 2.26
SMIM11A-202ENST00000399295 PRG4Q92954 1404 aaPredicted RBP29.17■■■□□ 2.26
SMIM11A-202ENST00000399295 EEA1Q15075 1411 aa29.16■■■□□ 2.26
SMIM11A-202ENST00000399295 ERCC6L2Q5T890 1561 aa29.15■■■□□ 2.26
SMIM11A-202ENST00000399295 PRXQ9BXM0 1461 aa29.14■■■□□ 2.26
SMIM11A-202ENST00000399295 FAM9AQ8IZU1 332 aaPredicted RBP29.11■■■□□ 2.25
SMIM11A-202ENST00000399295 IQGAP2Q13576 1575 aa29.03■■■□□ 2.24
SMIM11A-202ENST00000399295 CARMIL2Q6F5E8 1435 aa28.94■■■□□ 2.22
SMIM11A-202ENST00000399295 UGGT2Q9NYU1 1516 aa28.88■■■□□ 2.21
SMIM11A-202ENST00000399295 CTTNBP2Q8WZ74 1663 aa28.86■■■□□ 2.21
SMIM11A-202ENST00000399295 DISP1Q96F81 1524 aa28.84■■■□□ 2.21
SMIM11A-202ENST00000399295 TNIKQ9UKE5 1360 aa28.84■■■□□ 2.21
SMIM11A-202ENST00000399295 PTPRGP23470 1445 aa28.84■■■□□ 2.21
SMIM11A-202ENST00000399295 TTBK1Q5TCY1 1321 aaPredicted RBP28.82■■■□□ 2.2
SMIM11A-202ENST00000399295 KIF21BO75037 1637 aa28.8■■■□□ 2.2
SMIM11A-202ENST00000399295 TRHP20396 242 aaPredicted RBP28.76■■■□□ 2.19
SMIM11A-202ENST00000399295 GOLGA3Q08378 1498 aa28.74■■■□□ 2.19
SMIM11A-202ENST00000399295 KIAA0556O60303 1618 aa28.74■■■□□ 2.19
SMIM11A-202ENST00000399295 EHMT2Q96KQ7 1210 aa28.73■■■□□ 2.19
SMIM11A-202ENST00000399295 NPM1P06748 294 aaKnown RBP eCLIP28.71■■■□□ 2.19
SMIM11A-202ENST00000399295 UBTFP17480 764 aaKnown RBP28.69■■■□□ 2.18
SMIM11A-202ENST00000399295 ADCY10Q96PN6 1610 aa28.65■■■□□ 2.18
SMIM11A-202ENST00000399295 RANGAP1P46060 587 aaPredicted RBP28.64■■■□□ 2.18
SMIM11A-202ENST00000399295 P3H3Q8IVL6 736 aa28.63■■■□□ 2.17
SMIM11A-202ENST00000399295 UACAQ9BZF9 1416 aa28.61■■■□□ 2.17
SMIM11A-202ENST00000399295 UHRF1BP1LA0JNW5 1464 aa28.57■■■□□ 2.16
SMIM11A-202ENST00000399295 SAMD9Q5K651 1589 aa28.54■■■□□ 2.16
SMIM11A-202ENST00000399295 MAPKBP1O60336 1514 aa28.53■■■□□ 2.16
SMIM11A-202ENST00000399295 ABCC2Q92887 1545 aa28.53■■■□□ 2.16
SMIM11A-202ENST00000399295 PLB1Q6P1J6 1458 aa28.5■■■□□ 2.15
SMIM11A-202ENST00000399295 EFCAB5A4FU69 1503 aa28.44■■■□□ 2.14
SMIM11A-202ENST00000399295 FHOD3Q2V2M9 1422 aa28.43■■■□□ 2.14
SMIM11A-202ENST00000399295 ABCA8O94911 1581 aa28.43■■■□□ 2.14
SMIM11A-202ENST00000399295 KDM5BQ9UGL1 1544 aa28.43■■■□□ 2.14
SMIM11A-202ENST00000399295 ABCC10Q5T3U5 1492 aa28.41■■■□□ 2.14
SMIM11A-202ENST00000399295 FAM69CQ0P6D2 419 aa28.38■■■□□ 2.13
SMIM11A-202ENST00000399295 ASXL2Q76L83 1435 aa28.36■■■□□ 2.13
SMIM11A-202ENST00000399295 KIF13AQ9H1H9 1805 aa28.35■■■□□ 2.13
SMIM11A-202ENST00000399295 ZCCHC11Q5TAX3 1644 aaKnown RBP28.33■■■□□ 2.13
SMIM11A-202ENST00000399295 ARHGAP35Q9NRY4 1499 aa28.33■■■□□ 2.13
SMIM11A-202ENST00000399295 ARID3CA6NKF2 412 aa28.3■■■□□ 2.12
SMIM11A-202ENST00000399295 DIP2BQ9P265 1576 aa28.29■■■□□ 2.12
SMIM11A-202ENST00000399295 RAPGEF6Q8TEU7 1601 aa28.28■■■□□ 2.12
SMIM11A-202ENST00000399295 ATP10BO94823 1461 aa28.24■■■□□ 2.11
SMIM11A-202ENST00000399295 FMN1Q68DA7 1419 aa28.22■■■□□ 2.11
SMIM11A-202ENST00000399295 NUP153P49790 1475 aaKnown RBP28.21■■■□□ 2.11
SMIM11A-202ENST00000399295 WDR7Q9Y4E6 1490 aa28.21■■■□□ 2.11
SMIM11A-202ENST00000399295 GLI2P10070 1586 aa28.2■■■□□ 2.11
SMIM11A-202ENST00000399295 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.2■■■□□ 2.1
SMIM11A-202ENST00000399295 HNRNPUL2Q1KMD3 747 aaKnown RBP28.2■■■□□ 2.1
SMIM11A-202ENST00000399295 CLIP1P30622 1438 aa28.19■■■□□ 2.1
SMIM11A-202ENST00000399295 EPRSP07814 1512 aaKnown RBP28.18■■■□□ 2.1
SMIM11A-202ENST00000399295 LOC105371045A0A1W2PR82 267 aa28.18■■■□□ 2.1
SMIM11A-202ENST00000399295 KCNH8Q96L42 1107 aa28.16■■■□□ 2.1
SMIM11A-202ENST00000399295 ATP1B4Q9UN42 357 aaPredicted RBP28.14■■■□□ 2.1
SMIM11A-202ENST00000399295 PLEKHD1A6NEE1 506 aa28.06■■■□□ 2.08
SMIM11A-202ENST00000399295 CEP162Q5TB80 1403 aa28.05■■■□□ 2.08
SMIM11A-202ENST00000399295 HECW1Q76N89 1606 aa28.03■■■□□ 2.08
SMIM11A-202ENST00000399295 TSPOAP1O95153 1857 aa28.03■■■□□ 2.08
SMIM11A-202ENST00000399295 CDK13Q14004 1512 aaKnown RBP28.01■■■□□ 2.07
SMIM11A-202ENST00000399295 MAP3K4Q9Y6R4 1608 aa28■■■□□ 2.07
SMIM11A-202ENST00000399295 CASKIN1Q8WXD9 1431 aa28■■■□□ 2.07
SMIM11A-202ENST00000399295 TEX14Q8IWB6 1497 aa27.99■■■□□ 2.07
SMIM11A-202ENST00000399295 CD109Q6YHK3 1445 aa27.98■■■□□ 2.07
SMIM11A-202ENST00000399295 CFAP43Q8NDM7 1665 aa27.95■■■□□ 2.07
SMIM11A-202ENST00000399295 CDK11AQ9UQ88 783 aaPredicted RBP27.95■■■□□ 2.06
SMIM11A-202ENST00000399295 PCF11O94913 1555 aaKnown RBP27.94■■■□□ 2.06
SMIM11A-202ENST00000399295 PPRC1Q5VV67 1664 aaKnown RBP27.93■■■□□ 2.06
SMIM11A-202ENST00000399295 AEBP2Q6ZN18 517 aaPredicted RBP27.91■■■□□ 2.06
SMIM11A-202ENST00000399295 FYCO1Q9BQS8 1478 aa27.9■■■□□ 2.06
SMIM11A-202ENST00000399295 KDM6BO15054 1643 aa27.9■■■□□ 2.06
SMIM11A-202ENST00000399295 MAGI3Q5TCQ9 1506 aa27.9■■■□□ 2.06
SMIM11A-202ENST00000399295 ABCA9Q8IUA7 1624 aa27.88■■■□□ 2.05
SMIM11A-202ENST00000399295 CCDC18Q5T9S5 1454 aa27.87■■■□□ 2.05
SMIM11A-202ENST00000399295 LRRIQ1Q96JM4 1722 aa27.83■■■□□ 2.05
SMIM11A-202ENST00000399295 PHLDB1Q86UU1 1377 aa27.83■■■□□ 2.05
SMIM11A-202ENST00000399295 TROQ12816 1431 aaPredicted RBP27.8■■■□□ 2.04
SMIM11A-202ENST00000399295 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.78■■■□□ 2.04
SMIM11A-202ENST00000399295 COL17A1Q9UMD9 1497 aaPredicted RBP27.76■■■□□ 2.03
SMIM11A-202ENST00000399295 TTC37Q6PGP7 1564 aa27.73■■■□□ 2.03
SMIM11A-202ENST00000399295 VPS8Q8N3P4 1428 aa27.71■■■□□ 2.03
SMIM11A-202ENST00000399295 KIF14Q15058 1648 aa27.7■■■□□ 2.02
SMIM11A-202ENST00000399295 NEO1Q92859 1461 aa27.7■■■□□ 2.02
SMIM11A-202ENST00000399295 ARAP3Q8WWN8 1544 aa27.67■■■□□ 2.02
SMIM11A-202ENST00000399295 PLCH2O75038 1416 aa27.67■■■□□ 2.02
SMIM11A-202ENST00000399295 FANCAO15360 1455 aa27.64■■■□□ 2.02
SMIM11A-202ENST00000399295 MTUS2Q5JR59 1369 aa27.62■■■□□ 2.01
SMIM11A-202ENST00000399295 AKNAQ7Z591 1439 aa27.6■■■□□ 2.01
SMIM11A-202ENST00000399295 EFCAB2Q5VUJ9 269 aa27.6■■■□□ 2.01
SMIM11A-202ENST00000399295 CFAP74Q9C0B2 1584 aa27.58■■■□□ 2.01
SMIM11A-202ENST00000399295 RAPGEF3O95398 923 aa27.57■■■□□ 2
SMIM11A-202ENST00000399295 MYO5CQ9NQX4 1742 aa27.55■■■□□ 2
SMIM11A-202ENST00000399295 ARHGAP5Q13017 1502 aa27.52■■■□□ 2
SMIM11A-202ENST00000399295 EHBP1L1Q8N3D4 1523 aa27.51■■■□□ 2
SMIM11A-202ENST00000399295 DENND4BO75064 1496 aaPredicted RBP27.51■■■□□ 2
SMIM11A-202ENST00000399295 TIAM1Q13009 1591 aa27.51■■□□□ 1.99
SMIM11A-202ENST00000399295 ADGRL1O94910 1474 aa27.5■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms