RNA–Protein interactions for RNA: ENST00000399158.2

MED28P1-201, Transcript of mediator complex subunit 28 pseudogene 1, humanhuman

BASIC

Gene MED28P1, Length 571 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28P1-201ENST00000399158 ARHGAP35Q9NRY4 1499 aa13.77□□□□□ -0.21
MED28P1-201ENST00000399158 VPS8Q8N3P4 1428 aa13.75□□□□□ -0.21
MED28P1-201ENST00000399158 SNAPC4Q5SXM2 1469 aa13.74□□□□□ -0.21
MED28P1-201ENST00000399158 RANGAP1P46060 587 aaPredicted RBP13.72□□□□□ -0.21
MED28P1-201ENST00000399158 MAGI1Q96QZ7 1491 aaPredicted RBP13.72□□□□□ -0.21
MED28P1-201ENST00000399158 EFCAB5A4FU69 1503 aa13.68□□□□□ -0.22
MED28P1-201ENST00000399158 GRIN2AQ12879 1464 aa13.67□□□□□ -0.22
MED28P1-201ENST00000399158 SAMD9Q5K651 1589 aa13.67□□□□□ -0.22
MED28P1-201ENST00000399158 SYNJ2O15056 1496 aa13.67□□□□□ -0.22
MED28P1-201ENST00000399158 TRIM26Q12899 539 aaPredicted RBP13.65□□□□□ -0.22
MED28P1-201ENST00000399158 IQGAP2Q13576 1575 aa13.64□□□□□ -0.23
MED28P1-201ENST00000399158 PPARGC1BQ86YN6 1023 aaKnown RBP13.62□□□□□ -0.23
MED28P1-201ENST00000399158 PCGF6Q9BYE7 350 aa13.62□□□□□ -0.23
MED28P1-201ENST00000399158 KIAA0586Q9BVV6 1533 aa13.61□□□□□ -0.23
MED28P1-201ENST00000399158 CEP170Q5SW79 1584 aa13.61□□□□□ -0.23
MED28P1-201ENST00000399158 UGGT2Q9NYU1 1516 aa13.6□□□□□ -0.23
MED28P1-201ENST00000399158 NUP160Q12769 1436 aa13.6□□□□□ -0.23
MED28P1-201ENST00000399158 FHOD3Q2V2M9 1422 aa13.59□□□□□ -0.23
MED28P1-201ENST00000399158 ADRA2BP18089 450 aa13.58□□□□□ -0.24
MED28P1-201ENST00000399158 P3H3Q8IVL6 736 aa13.57□□□□□ -0.24
MED28P1-201ENST00000399158 CHMP7Q8WUX9 453 aaPredicted RBP13.57□□□□□ -0.24
MED28P1-201ENST00000399158 PCF11O94913 1555 aaKnown RBP13.57□□□□□ -0.24
MED28P1-201ENST00000399158 CHD1O14646 1710 aa13.56□□□□□ -0.24
MED28P1-201ENST00000399158 MAP3K1Q13233 1512 aa13.55□□□□□ -0.24
MED28P1-201ENST00000399158 CASKIN1Q8WXD9 1431 aa13.53□□□□□ -0.24
MED28P1-201ENST00000399158 DISP1Q96F81 1524 aa13.53□□□□□ -0.24
MED28P1-201ENST00000399158 FMN1Q68DA7 1419 aa13.52□□□□□ -0.25
MED28P1-201ENST00000399158 FYCO1Q9BQS8 1478 aa13.52□□□□□ -0.25
MED28P1-201ENST00000399158 TIAM1Q13009 1591 aa13.52□□□□□ -0.25
MED28P1-201ENST00000399158 KIAA0556O60303 1618 aa13.52□□□□□ -0.25
MED28P1-201ENST00000399158 CFAP43Q8NDM7 1665 aa13.52□□□□□ -0.25
MED28P1-201ENST00000399158 APLP2Q06481 763 aa13.51□□□□□ -0.25
MED28P1-201ENST00000399158 FBLN2P98095 1184 aa13.5□□□□□ -0.25
MED28P1-201ENST00000399158 LRRIQ1Q96JM4 1722 aa13.5□□□□□ -0.25
MED28P1-201ENST00000399158 KANK4Q5T7N3 995 aaPredicted RBP13.49□□□□□ -0.25
MED28P1-201ENST00000399158 TTBK1Q5TCY1 1321 aaPredicted RBP13.47□□□□□ -0.25
MED28P1-201ENST00000399158 LRRC9Q6ZRR7 1453 aa13.44□□□□□ -0.26
MED28P1-201ENST00000399158 SHROOM2Q13796 1616 aa13.44□□□□□ -0.26
MED28P1-201ENST00000399158 JPH4Q96JJ6 628 aa13.44□□□□□ -0.26
MED28P1-201ENST00000399158 CLASP1Q7Z460 1538 aa13.41□□□□□ -0.26
MED28P1-201ENST00000399158 HECW1Q76N89 1606 aa13.41□□□□□ -0.26
MED28P1-201ENST00000399158 CARMIL2Q6F5E8 1435 aa13.39□□□□□ -0.27
MED28P1-201ENST00000399158 KCNA4P22459 653 aa13.39□□□□□ -0.27
MED28P1-201ENST00000399158 RAPGEF6Q8TEU7 1601 aa13.39□□□□□ -0.27
MED28P1-201ENST00000399158 PPP6R1Q9UPN7 881 aa13.38□□□□□ -0.27
MED28P1-201ENST00000399158 CCDC18Q5T9S5 1454 aa13.37□□□□□ -0.27
MED28P1-201ENST00000399158 ATP1B4Q9UN42 357 aaPredicted RBP13.37□□□□□ -0.27
MED28P1-201ENST00000399158 EPRSP07814 1512 aaKnown RBP13.37□□□□□ -0.27
MED28P1-201ENST00000399158 PRG4Q92954 1404 aaPredicted RBP13.37□□□□□ -0.27
MED28P1-201ENST00000399158 RRBP1Q9P2E9 1410 aaKnown RBP13.37□□□□□ -0.27
MED28P1-201ENST00000399158 NUP153P49790 1475 aaKnown RBP13.36□□□□□ -0.27
MED28P1-201ENST00000399158 MAGI3Q5TCQ9 1506 aa13.34□□□□□ -0.27
MED28P1-201ENST00000399158 ABCA8O94911 1581 aa13.34□□□□□ -0.27
MED28P1-201ENST00000399158 CDK13Q14004 1512 aaKnown RBP13.33□□□□□ -0.28
MED28P1-201ENST00000399158 EHBP1L1Q8N3D4 1523 aa13.33□□□□□ -0.28
MED28P1-201ENST00000399158 ERCC6L2Q5T890 1561 aa13.32□□□□□ -0.28
MED28P1-201ENST00000399158 PLB1Q6P1J6 1458 aa13.32□□□□□ -0.28
MED28P1-201ENST00000399158 PHLDB1Q86UU1 1377 aa13.32□□□□□ -0.28
MED28P1-201ENST00000399158 ARHGEF11O15085 1522 aa13.3□□□□□ -0.28
MED28P1-201ENST00000399158 FOXD1Q16676 465 aa13.29□□□□□ -0.28
MED28P1-201ENST00000399158 SUPT6HQ7KZ85 1726 aaKnown RBP13.29□□□□□ -0.28
MED28P1-201ENST00000399158 MTUS2Q5JR59 1369 aa13.29□□□□□ -0.28
MED28P1-201ENST00000399158 CCNB3Q8WWL7 1395 aa13.28□□□□□ -0.28
MED28P1-201ENST00000399158 PTPRGP23470 1445 aa13.27□□□□□ -0.29
MED28P1-201ENST00000399158 NCOA2Q15596 1464 aa13.27□□□□□ -0.29
MED28P1-201ENST00000399158 HRCP23327 699 aa13.26□□□□□ -0.29
MED28P1-201ENST00000399158 ATP10BO94823 1461 aa13.23□□□□□ -0.29
MED28P1-201ENST00000399158 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.22□□□□□ -0.29
MED28P1-201ENST00000399158 HNRNPUL2Q1KMD3 747 aaKnown RBP13.22□□□□□ -0.29
MED28P1-201ENST00000399158 MYOM3Q5VTT5 1437 aa13.22□□□□□ -0.29
MED28P1-201ENST00000399158 FGD6Q6ZV73 1430 aa13.22□□□□□ -0.29
MED28P1-201ENST00000399158 UACAQ9BZF9 1416 aa13.22□□□□□ -0.29
MED28P1-201ENST00000399158 ADCY10Q96PN6 1610 aa13.21□□□□□ -0.29
MED28P1-201ENST00000399158 ARID3CA6NKF2 412 aa13.21□□□□□ -0.29
MED28P1-201ENST00000399158 TROQ12816 1431 aaPredicted RBP13.2□□□□□ -0.3
MED28P1-201ENST00000399158 ABCC2Q92887 1545 aa13.19□□□□□ -0.3
MED28P1-201ENST00000399158 OSCARQ8IYS5 282 aa13.19□□□□□ -0.3
MED28P1-201ENST00000399158 UHRF1BP1LA0JNW5 1464 aa13.18□□□□□ -0.3
MED28P1-201ENST00000399158 CDK11AQ9UQ88 783 aaPredicted RBP13.17□□□□□ -0.3
MED28P1-201ENST00000399158 KIF14Q15058 1648 aa13.17□□□□□ -0.3
MED28P1-201ENST00000399158 PTPN23Q9H3S7 1636 aa13.17□□□□□ -0.3
MED28P1-201ENST00000399158 TCOF1Q13428 1488 aaKnown RBP13.16□□□□□ -0.3
MED28P1-201ENST00000399158 MIA2Q96PC5 1412 aa13.14□□□□□ -0.31
MED28P1-201ENST00000399158 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.14□□□□□ -0.31
MED28P1-201ENST00000399158 ABCC10Q5T3U5 1492 aa13.13□□□□□ -0.31
MED28P1-201ENST00000399158 FAM50AQ14320 339 aaKnown RBP13.13□□□□□ -0.31
MED28P1-201ENST00000399158 KDM5BQ9UGL1 1544 aa13.13□□□□□ -0.31
MED28P1-201ENST00000399158 ZCCHC11Q5TAX3 1644 aaKnown RBP13.12□□□□□ -0.31
MED28P1-201ENST00000399158 PLEKHD1A6NEE1 506 aa13.11□□□□□ -0.31
MED28P1-201ENST00000399158 ITSN2Q9NZM3 1697 aa13.11□□□□□ -0.31
MED28P1-201ENST00000399158 CDC42BPAQ5VT25 1732 aa13.1□□□□□ -0.31
MED28P1-201ENST00000399158 GPATCH8Q9UKJ3 1502 aaKnown RBP13.1□□□□□ -0.31
MED28P1-201ENST00000399158 PTPRKQ15262 1439 aa13.1□□□□□ -0.31
MED28P1-201ENST00000399158 ITGAEP38570 1179 aa13.08□□□□□ -0.32
MED28P1-201ENST00000399158 ZEB1P37275 1124 aaPredicted RBP13.07□□□□□ -0.32
MED28P1-201ENST00000399158 CCER1Q8TC90 406 aaPredicted RBP13.06□□□□□ -0.32
MED28P1-201ENST00000399158 SETD5Q9C0A6 1442 aa13.05□□□□□ -0.32
MED28P1-201ENST00000399158 DNMT1P26358 1616 aaKnown RBP13.05□□□□□ -0.32
MED28P1-201ENST00000399158 CDC42BPBQ9Y5S2 1711 aa13.04□□□□□ -0.32
MED28P1-201ENST00000399158 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms