RNA–Protein interactions for RNA: ENST00000399004.6

GIN1-201, Transcript of gypsy retrotransposon integrase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GIN1, Length 3,229 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GIN1-201ENST00000399004 TOPBP1Q92547 1522 aa13.39□□□□□ -0.27
GIN1-201ENST00000399004 IGF1RP08069 1367 aa13.39□□□□□ -0.27
GIN1-201ENST00000399004 LRRIQ1Q96JM4 1722 aa13.38□□□□□ -0.27
GIN1-201ENST00000399004 THOC2Q8NI27 1593 aaKnown RBP13.38□□□□□ -0.27
GIN1-201ENST00000399004 FANCD2Q9BXW9 1451 aa13.38□□□□□ -0.27
GIN1-201ENST00000399004 TARBP1Q13395 1621 aaKnown RBP13.38□□□□□ -0.27
GIN1-201ENST00000399004 HNRNPUL2Q1KMD3 747 aaKnown RBP13.36□□□□□ -0.27
GIN1-201ENST00000399004 CLSPNQ9HAW4 1339 aa13.34□□□□□ -0.27
GIN1-201ENST00000399004 POLA1P09884 1462 aaPredicted RBP13.33□□□□□ -0.27
GIN1-201ENST00000399004 PBRM1Q86U86 1689 aa13.32□□□□□ -0.28
GIN1-201ENST00000399004 PCF11O94913 1555 aaKnown RBP13.31□□□□□ -0.28
GIN1-201ENST00000399004 UBTFP17480 764 aaKnown RBP13.31□□□□□ -0.28
GIN1-201ENST00000399004 URB2Q14146 1524 aaKnown RBP13.3□□□□□ -0.28
GIN1-201ENST00000399004 FYCO1Q9BQS8 1478 aa13.3□□□□□ -0.28
GIN1-201ENST00000399004 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.3□□□□□ -0.28
GIN1-201ENST00000399004 SNAPC4Q5SXM2 1469 aa13.27□□□□□ -0.29
GIN1-201ENST00000399004 ARHGEF11O15085 1522 aa13.26□□□□□ -0.29
GIN1-201ENST00000399004 LRRC9Q6ZRR7 1453 aa13.25□□□□□ -0.29
GIN1-201ENST00000399004 MIER1Q8N108 512 aa13.22□□□□□ -0.29
GIN1-201ENST00000399004 CARMIL1Q5VZK9 1371 aa13.22□□□□□ -0.29
GIN1-201ENST00000399004 CASKIN1Q8WXD9 1431 aa13.22□□□□□ -0.29
GIN1-201ENST00000399004 FHAD1B1AJZ9 1412 aa13.21□□□□□ -0.29
GIN1-201ENST00000399004 ADAMTS12P58397 1594 aa13.19□□□□□ -0.3
GIN1-201ENST00000399004 SENP3Q9H4L4 574 aaPredicted RBP13.19□□□□□ -0.3
GIN1-201ENST00000399004 MAPKBP1O60336 1514 aa13.19□□□□□ -0.3
GIN1-201ENST00000399004 DHX57Q6P158 1386 aaKnown RBP13.19□□□□□ -0.3
GIN1-201ENST00000399004 GRIN2BQ13224 1484 aa13.17□□□□□ -0.3
GIN1-201ENST00000399004 NESP48681 1621 aa13.16□□□□□ -0.3
GIN1-201ENST00000399004 WDR62O43379 1518 aa13.16□□□□□ -0.3
GIN1-201ENST00000399004 ZNF316A6NFI3 1004 aaPredicted RBP13.15□□□□□ -0.3
GIN1-201ENST00000399004 GCC2Q8IWJ2 1684 aa13.15□□□□□ -0.3
GIN1-201ENST00000399004 RAD54L2Q9Y4B4 1467 aa13.14□□□□□ -0.31
GIN1-201ENST00000399004 CCNB3Q8WWL7 1395 aa13.12□□□□□ -0.31
GIN1-201ENST00000399004 BCANQ96GW7 911 aa13.11□□□□□ -0.31
GIN1-201ENST00000399004 PDS5BQ9NTI5 1447 aa13.11□□□□□ -0.31
GIN1-201ENST00000399004 UGGT2Q9NYU1 1516 aa13.1□□□□□ -0.31
GIN1-201ENST00000399004 SUPT6HQ7KZ85 1726 aaKnown RBP13.1□□□□□ -0.31
GIN1-201ENST00000399004 TCOF1Q13428 1488 aaKnown RBP13.09□□□□□ -0.31
GIN1-201ENST00000399004 EHBP1L1Q8N3D4 1523 aa13.09□□□□□ -0.31
GIN1-201ENST00000399004 KANK4Q5T7N3 995 aaPredicted RBP13.08□□□□□ -0.32
GIN1-201ENST00000399004 GAPVD1Q14C86 1478 aa13.07□□□□□ -0.32
GIN1-201ENST00000399004 FMN1Q68DA7 1419 aa13.07□□□□□ -0.32
GIN1-201ENST00000399004 ITGAEP38570 1179 aa13.06□□□□□ -0.32
GIN1-201ENST00000399004 HECW1Q76N89 1606 aa13.06□□□□□ -0.32
GIN1-201ENST00000399004 ADCY10Q96PN6 1610 aa13.05□□□□□ -0.32
GIN1-201ENST00000399004 CCDC18Q5T9S5 1454 aa13.04□□□□□ -0.32
GIN1-201ENST00000399004 MRC2Q9UBG0 1479 aa13.04□□□□□ -0.32
GIN1-201ENST00000399004 IQGAP2Q13576 1575 aa13.04□□□□□ -0.32
GIN1-201ENST00000399004 AKNAQ7Z591 1439 aa13.04□□□□□ -0.32
GIN1-201ENST00000399004 PHLDB1Q86UU1 1377 aa13.03□□□□□ -0.32
GIN1-201ENST00000399004 APLP2Q06481 763 aa13.02□□□□□ -0.32
GIN1-201ENST00000399004 PTPN23Q9H3S7 1636 aa13.02□□□□□ -0.32
GIN1-201ENST00000399004 MAGI3Q5TCQ9 1506 aa13.01□□□□□ -0.33
GIN1-201ENST00000399004 KDM5BQ9UGL1 1544 aa13□□□□□ -0.33
GIN1-201ENST00000399004 KIAA0556O60303 1618 aa12.98□□□□□ -0.33
GIN1-201ENST00000399004 SETD5Q9C0A6 1442 aa12.97□□□□□ -0.33
GIN1-201ENST00000399004 CROCC2H7BZ55 1655 aa12.97□□□□□ -0.33
GIN1-201ENST00000399004 IFT140Q96RY7 1462 aa12.97□□□□□ -0.33
GIN1-201ENST00000399004 POLR1AO95602 1720 aaPredicted RBP12.96□□□□□ -0.33
GIN1-201ENST00000399004 EIF4G3O43432 1585 aaKnown RBP12.96□□□□□ -0.33
GIN1-201ENST00000399004 FGD6Q6ZV73 1430 aa12.96□□□□□ -0.34
GIN1-201ENST00000399004 MYT1Q01538 1121 aa12.96□□□□□ -0.34
GIN1-201ENST00000399004 FHOD3Q2V2M9 1422 aa12.95□□□□□ -0.34
GIN1-201ENST00000399004 HFM1A2PYH4 1435 aa12.95□□□□□ -0.34
GIN1-201ENST00000399004 RAB3GAP2Q9H2M9 1393 aa12.93□□□□□ -0.34
GIN1-201ENST00000399004 TIMELESSQ9UNS1 1208 aa12.92□□□□□ -0.34
GIN1-201ENST00000399004 ADGBQ8N7X0 1667 aa12.92□□□□□ -0.34
GIN1-201ENST00000399004 DNMT1P26358 1616 aaKnown RBP12.91□□□□□ -0.34
GIN1-201ENST00000399004 MYOM3Q5VTT5 1437 aa12.91□□□□□ -0.34
GIN1-201ENST00000399004 DISP1Q96F81 1524 aa12.91□□□□□ -0.34
GIN1-201ENST00000399004 NCOA2Q15596 1464 aa12.9□□□□□ -0.34
GIN1-201ENST00000399004 RAPGEF6Q8TEU7 1601 aa12.89□□□□□ -0.35
GIN1-201ENST00000399004 MIA2Q96PC5 1412 aa12.89□□□□□ -0.35
GIN1-201ENST00000399004 ITSN2Q9NZM3 1697 aa12.88□□□□□ -0.35
GIN1-201ENST00000399004 DENND4BO75064 1496 aaPredicted RBP12.88□□□□□ -0.35
GIN1-201ENST00000399004 EPRSP07814 1512 aaKnown RBP12.88□□□□□ -0.35
GIN1-201ENST00000399004 KIAA0586Q9BVV6 1533 aa12.87□□□□□ -0.35
GIN1-201ENST00000399004 MAGI1Q96QZ7 1491 aaPredicted RBP12.87□□□□□ -0.35
GIN1-201ENST00000399004 PTPRKQ15262 1439 aa12.87□□□□□ -0.35
GIN1-201ENST00000399004 KCNH8Q96L42 1107 aa12.86□□□□□ -0.35
GIN1-201ENST00000399004 UACAQ9BZF9 1416 aa12.85□□□□□ -0.35
GIN1-201ENST00000399004 CEP170Q5SW79 1584 aa12.85□□□□□ -0.35
GIN1-201ENST00000399004 HIRIP3Q9BW71 556 aaPredicted RBP12.85□□□□□ -0.35
GIN1-201ENST00000399004 SUPT16HQ9Y5B9 1047 aaKnown RBP12.84□□□□□ -0.35
GIN1-201ENST00000399004 NAIPQ13075 1403 aa12.84□□□□□ -0.35
GIN1-201ENST00000399004 GRIN2AQ12879 1464 aa12.83□□□□□ -0.36
GIN1-201ENST00000399004 SHROOM2Q13796 1616 aa12.81□□□□□ -0.36
GIN1-201ENST00000399004 NUP160Q12769 1436 aa12.81□□□□□ -0.36
GIN1-201ENST00000399004 KDM6BO15054 1643 aa12.8□□□□□ -0.36
GIN1-201ENST00000399004 ABCA8O94911 1581 aa12.8□□□□□ -0.36
GIN1-201ENST00000399004 ROCK1Q13464 1354 aa12.79□□□□□ -0.36
GIN1-201ENST00000399004 PLPPR3Q6T4P5 718 aa12.79□□□□□ -0.36
GIN1-201ENST00000399004 ATP1B4Q9UN42 357 aaPredicted RBP12.79□□□□□ -0.36
GIN1-201ENST00000399004 TDRD9Q8NDG6 1382 aaKnown RBP12.79□□□□□ -0.36
GIN1-201ENST00000399004 NUP153P49790 1475 aaKnown RBP12.78□□□□□ -0.36
GIN1-201ENST00000399004 ADGRL2O95490 1459 aa12.78□□□□□ -0.36
GIN1-201ENST00000399004 CDC42BPAQ5VT25 1732 aa12.78□□□□□ -0.36
GIN1-201ENST00000399004 KDM5DQ9BY66 1539 aa12.76□□□□□ -0.37
GIN1-201ENST00000399004 ZNF608Q9ULD9 1512 aaPredicted RBP12.76□□□□□ -0.37
GIN1-201ENST00000399004 FKBP8Q14318 412 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms