RNA–Protein interactions for RNA: ENST00000398842.7

CDH23-206, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 1,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-206ENST00000398842 FHAD1B1AJZ9 1412 aa36.27■■■■□ 3.4
CDH23-206ENST00000398842 PPARGC1BQ86YN6 1023 aaKnown RBP36.24■■■■□ 3.39
CDH23-206ENST00000398842 SNAPC4Q5SXM2 1469 aa36.1■■■■□ 3.37
CDH23-206ENST00000398842 EFCAB5A4FU69 1503 aa36.08■■■■□ 3.37
CDH23-206ENST00000398842 MAGI1Q96QZ7 1491 aaPredicted RBP36.03■■■■□ 3.36
CDH23-206ENST00000398842 APLP2Q06481 763 aa35.96■■■■□ 3.35
CDH23-206ENST00000398842 SAMD9Q5K651 1589 aa35.95■■■■□ 3.35
CDH23-206ENST00000398842 GRIN2AQ12879 1464 aa35.93■■■■□ 3.34
CDH23-206ENST00000398842 IQGAP2Q13576 1575 aa35.9■■■■□ 3.34
CDH23-206ENST00000398842 SYNJ2O15056 1496 aa35.89■■■■□ 3.34
CDH23-206ENST00000398842 TTBK1Q5TCY1 1321 aaPredicted RBP35.89■■■■□ 3.34
CDH23-206ENST00000398842 FHOD3Q2V2M9 1422 aa35.88■■■■□ 3.33
CDH23-206ENST00000398842 P3H3Q8IVL6 736 aa35.86■■■■□ 3.33
CDH23-206ENST00000398842 KIAA0586Q9BVV6 1533 aa35.79■■■■□ 3.32
CDH23-206ENST00000398842 PCF11O94913 1555 aaKnown RBP35.78■■■■□ 3.32
CDH23-206ENST00000398842 MAP3K1Q13233 1512 aa35.76■■■■□ 3.32
CDH23-206ENST00000398842 CHMP7Q8WUX9 453 aaPredicted RBP35.75■■■■□ 3.31
CDH23-206ENST00000398842 UGGT2Q9NYU1 1516 aa35.75■■■■□ 3.31
CDH23-206ENST00000398842 FBLN2P98095 1184 aa35.74■■■■□ 3.31
CDH23-206ENST00000398842 FMN1Q68DA7 1419 aa35.73■■■■□ 3.31
CDH23-206ENST00000398842 CEP170Q5SW79 1584 aa35.72■■■■□ 3.31
CDH23-206ENST00000398842 FYCO1Q9BQS8 1478 aa35.7■■■■□ 3.31
CDH23-206ENST00000398842 TIAM1Q13009 1591 aa35.7■■■■□ 3.31
CDH23-206ENST00000398842 CASKIN1Q8WXD9 1431 aa35.7■■■■□ 3.3
CDH23-206ENST00000398842 KANK4Q5T7N3 995 aaPredicted RBP35.69■■■■□ 3.3
CDH23-206ENST00000398842 NUP160Q12769 1436 aa35.66■■■■□ 3.3
CDH23-206ENST00000398842 CFAP43Q8NDM7 1665 aa35.64■■■■□ 3.3
CDH23-206ENST00000398842 DISP1Q96F81 1524 aa35.55■■■■□ 3.28
CDH23-206ENST00000398842 KIAA0556O60303 1618 aa35.55■■■■□ 3.28
CDH23-206ENST00000398842 HRCP23327 699 aa35.53■■■■□ 3.28
CDH23-206ENST00000398842 CHD1O14646 1710 aa35.53■■■■□ 3.28
CDH23-206ENST00000398842 LRRC9Q6ZRR7 1453 aa35.52■■■■□ 3.28
CDH23-206ENST00000398842 LRRIQ1Q96JM4 1722 aa35.47■■■■□ 3.27
CDH23-206ENST00000398842 ATP1B4Q9UN42 357 aaPredicted RBP35.46■■■■□ 3.27
CDH23-206ENST00000398842 JPH4Q96JJ6 628 aa35.37■■■■□ 3.25
CDH23-206ENST00000398842 HECW1Q76N89 1606 aa35.37■■■■□ 3.25
CDH23-206ENST00000398842 RRBP1Q9P2E9 1410 aaKnown RBP35.35■■■■□ 3.25
CDH23-206ENST00000398842 CCDC18Q5T9S5 1454 aa35.3■■■■□ 3.24
CDH23-206ENST00000398842 CARMIL2Q6F5E8 1435 aa35.3■■■■□ 3.24
CDH23-206ENST00000398842 EPRSP07814 1512 aaKnown RBP35.23■■■■□ 3.23
CDH23-206ENST00000398842 RAPGEF6Q8TEU7 1601 aa35.22■■■■□ 3.23
CDH23-206ENST00000398842 PHLDB1Q86UU1 1377 aa35.21■■■■□ 3.23
CDH23-206ENST00000398842 CCNB3Q8WWL7 1395 aa35.2■■■■□ 3.22
CDH23-206ENST00000398842 MTUS2Q5JR59 1369 aa35.18■■■■□ 3.22
CDH23-206ENST00000398842 SHROOM2Q13796 1616 aa35.18■■■■□ 3.22
CDH23-206ENST00000398842 EHBP1L1Q8N3D4 1523 aa35.17■■■■□ 3.22
CDH23-206ENST00000398842 HNRNPUL2Q1KMD3 747 aaKnown RBP35.16■■■■□ 3.22
CDH23-206ENST00000398842 MAGI3Q5TCQ9 1506 aa35.14■■■■□ 3.22
CDH23-206ENST00000398842 OSCARQ8IYS5 282 aa35.13■■■■□ 3.21
CDH23-206ENST00000398842 NUP153P49790 1475 aaKnown RBP35.13■■■■□ 3.21
CDH23-206ENST00000398842 PRG4Q92954 1404 aaPredicted RBP35.13■■■■□ 3.21
CDH23-206ENST00000398842 CDK13Q14004 1512 aaKnown RBP35.13■■■■□ 3.21
CDH23-206ENST00000398842 SUPT6HQ7KZ85 1726 aaKnown RBP35.09■■■■□ 3.21
CDH23-206ENST00000398842 CLASP1Q7Z460 1538 aa35.08■■■■□ 3.21
CDH23-206ENST00000398842 PLB1Q6P1J6 1458 aa35.07■■■■□ 3.2
CDH23-206ENST00000398842 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.04■■■■□ 3.2
CDH23-206ENST00000398842 NCOA2Q15596 1464 aa35.04■■■■□ 3.2
CDH23-206ENST00000398842 ARHGEF11O15085 1522 aa35.02■■■■□ 3.2
CDH23-206ENST00000398842 ABCA8O94911 1581 aa35.02■■■■□ 3.2
CDH23-206ENST00000398842 ZEB1P37275 1124 aaPredicted RBP35.01■■■■□ 3.2
CDH23-206ENST00000398842 ARID3CA6NKF2 412 aa34.95■■■■□ 3.19
CDH23-206ENST00000398842 FGD6Q6ZV73 1430 aa34.94■■■■□ 3.18
CDH23-206ENST00000398842 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.94■■■■□ 3.18
CDH23-206ENST00000398842 PTPRGP23470 1445 aa34.92■■■■□ 3.18
CDH23-206ENST00000398842 MYOM3Q5VTT5 1437 aa34.92■■■■□ 3.18
CDH23-206ENST00000398842 CCER1Q8TC90 406 aaPredicted RBP34.92■■■■□ 3.18
CDH23-206ENST00000398842 ERCC6L2Q5T890 1561 aa34.91■■■■□ 3.18
CDH23-206ENST00000398842 FAM50AQ14320 339 aaKnown RBP34.85■■■■□ 3.17
CDH23-206ENST00000398842 CDK11AQ9UQ88 783 aaPredicted RBP34.84■■■■□ 3.17
CDH23-206ENST00000398842 ATP10BO94823 1461 aa34.79■■■■□ 3.16
CDH23-206ENST00000398842 TROQ12816 1431 aaPredicted RBP34.79■■■■□ 3.16
CDH23-206ENST00000398842 ITGAEP38570 1179 aa34.79■■■■□ 3.16
CDH23-206ENST00000398842 PTPN23Q9H3S7 1636 aa34.76■■■■□ 3.16
CDH23-206ENST00000398842 UACAQ9BZF9 1416 aa34.75■■■■□ 3.15
CDH23-206ENST00000398842 ADCY10Q96PN6 1610 aa34.75■■■■□ 3.15
CDH23-206ENST00000398842 TCOF1Q13428 1488 aaKnown RBP34.72■■■■□ 3.15
CDH23-206ENST00000398842 MIA2Q96PC5 1412 aa34.71■■■■□ 3.15
CDH23-206ENST00000398842 ABCC2Q92887 1545 aa34.66■■■■□ 3.14
CDH23-206ENST00000398842 KIF14Q15058 1648 aa34.64■■■■□ 3.14
CDH23-206ENST00000398842 PLEKHD1A6NEE1 506 aa34.61■■■■□ 3.13
CDH23-206ENST00000398842 SETD5Q9C0A6 1442 aa34.59■■■■□ 3.13
CDH23-206ENST00000398842 PTPRKQ15262 1439 aa34.57■■■■□ 3.12
CDH23-206ENST00000398842 UHRF1BP1LA0JNW5 1464 aa34.57■■■■□ 3.12
CDH23-206ENST00000398842 RAB3GAP2Q9H2M9 1393 aa34.56■■■■□ 3.12
CDH23-206ENST00000398842 ITSN2Q9NZM3 1697 aa34.56■■■■□ 3.12
CDH23-206ENST00000398842 DHX57Q6P158 1386 aaKnown RBP34.54■■■■□ 3.12
CDH23-206ENST00000398842 GPATCH8Q9UKJ3 1502 aaKnown RBP34.51■■■■□ 3.12
CDH23-206ENST00000398842 ABCC10Q5T3U5 1492 aa34.51■■■■□ 3.12
CDH23-206ENST00000398842 CDC42BPAQ5VT25 1732 aa34.46■■■■□ 3.11
CDH23-206ENST00000398842 ZCCHC11Q5TAX3 1644 aaKnown RBP34.44■■■■□ 3.1
CDH23-206ENST00000398842 RIMBP3CA6NJZ7 1639 aa34.43■■■■□ 3.1
CDH23-206ENST00000398842 RIMBP3BA6NNM3 1639 aa34.43■■■■□ 3.1
CDH23-206ENST00000398842 RIMBP3Q9UFD9 1639 aa34.43■■■■□ 3.1
CDH23-206ENST00000398842 KDM5BQ9UGL1 1544 aa34.43■■■■□ 3.1
CDH23-206ENST00000398842 HFM1A2PYH4 1435 aa34.43■■■■□ 3.1
CDH23-206ENST00000398842 CLSPNQ9HAW4 1339 aa34.42■■■■□ 3.1
CDH23-206ENST00000398842 DNMT1P26358 1616 aaKnown RBP34.4■■■■□ 3.1
CDH23-206ENST00000398842 CFDP1Q9UEE9 299 aaPredicted RBP34.38■■■■□ 3.09
CDH23-206ENST00000398842 CAMSAP2Q08AD1 1489 aa34.37■■■■□ 3.09
CDH23-206ENST00000398842 ZNF644Q9H582 1327 aaPredicted RBP34.37■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms