RNA–Protein interactions for RNA: ENST00000398193.8

RGPD1-201, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,425 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-201ENST00000398193 ZEB1P37275 1124 aaPredicted RBP11.42□□□□□ -0.58
RGPD1-201ENST00000398193 DNAJC5BQ9UF47 199 aa11.42□□□□□ -0.58
RGPD1-201ENST00000398193 FYCO1Q9BQS8 1478 aa11.41□□□□□ -0.58
RGPD1-201ENST00000398193 EHMT2Q96KQ7 1210 aa11.41□□□□□ -0.58
RGPD1-201ENST00000398193 MAGI1Q96QZ7 1491 aaPredicted RBP11.41□□□□□ -0.58
RGPD1-201ENST00000398193 EIF4G3O43432 1585 aaKnown RBP11.41□□□□□ -0.58
RGPD1-201ENST00000398193 TIAM1Q13009 1591 aa11.39□□□□□ -0.59
RGPD1-201ENST00000398193 APLP2Q06481 763 aa11.38□□□□□ -0.59
RGPD1-201ENST00000398193 CASKIN1Q8WXD9 1431 aa11.37□□□□□ -0.59
RGPD1-201ENST00000398193 FMN1Q68DA7 1419 aa11.37□□□□□ -0.59
RGPD1-201ENST00000398193 UGGT2Q9NYU1 1516 aa11.37□□□□□ -0.59
RGPD1-201ENST00000398193 IQGAP2Q13576 1575 aa11.37□□□□□ -0.59
RGPD1-201ENST00000398193 TDRD9Q8NDG6 1382 aaKnown RBP11.36□□□□□ -0.59
RGPD1-201ENST00000398193 PCF11O94913 1555 aaKnown RBP11.35□□□□□ -0.59
RGPD1-201ENST00000398193 RRBP1Q9P2E9 1410 aaKnown RBP11.33□□□□□ -0.6
RGPD1-201ENST00000398193 SYNJ2O15056 1496 aa11.32□□□□□ -0.6
RGPD1-201ENST00000398193 KIAA0586Q9BVV6 1533 aa11.31□□□□□ -0.6
RGPD1-201ENST00000398193 SNAPC4Q5SXM2 1469 aa11.31□□□□□ -0.6
RGPD1-201ENST00000398193 CCDC18Q5T9S5 1454 aa11.31□□□□□ -0.6
RGPD1-201ENST00000398193 GRIN2AQ12879 1464 aa11.31□□□□□ -0.6
RGPD1-201ENST00000398193 HECW1Q76N89 1606 aa11.3□□□□□ -0.6
RGPD1-201ENST00000398193 LRRC9Q6ZRR7 1453 aa11.29□□□□□ -0.6
RGPD1-201ENST00000398193 ZNF608Q9ULD9 1512 aaPredicted RBP11.29□□□□□ -0.6
RGPD1-201ENST00000398193 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.27□□□□□ -0.61
RGPD1-201ENST00000398193 KIAA0556O60303 1618 aa11.27□□□□□ -0.61
RGPD1-201ENST00000398193 NUP160Q12769 1436 aa11.26□□□□□ -0.61
RGPD1-201ENST00000398193 EHBP1L1Q8N3D4 1523 aa11.26□□□□□ -0.61
RGPD1-201ENST00000398193 FHOD3Q2V2M9 1422 aa11.24□□□□□ -0.61
RGPD1-201ENST00000398193 CEP170Q5SW79 1584 aa11.23□□□□□ -0.61
RGPD1-201ENST00000398193 LRRIQ1Q96JM4 1722 aa11.21□□□□□ -0.61
RGPD1-201ENST00000398193 SUPT6HQ7KZ85 1726 aaKnown RBP11.21□□□□□ -0.62
RGPD1-201ENST00000398193 ARHGEF11O15085 1522 aa11.2□□□□□ -0.62
RGPD1-201ENST00000398193 DISP1Q96F81 1524 aa11.2□□□□□ -0.62
RGPD1-201ENST00000398193 CCNB3Q8WWL7 1395 aa11.18□□□□□ -0.62
RGPD1-201ENST00000398193 RAPGEF6Q8TEU7 1601 aa11.18□□□□□ -0.62
RGPD1-201ENST00000398193 SHROOM2Q13796 1616 aa11.17□□□□□ -0.62
RGPD1-201ENST00000398193 CLSPNQ9HAW4 1339 aa11.17□□□□□ -0.62
RGPD1-201ENST00000398193 KANK4Q5T7N3 995 aaPredicted RBP11.16□□□□□ -0.62
RGPD1-201ENST00000398193 CARMIL2Q6F5E8 1435 aa11.15□□□□□ -0.62
RGPD1-201ENST00000398193 PPARGC1BQ86YN6 1023 aaKnown RBP11.15□□□□□ -0.62
RGPD1-201ENST00000398193 ADCY10Q96PN6 1610 aa11.15□□□□□ -0.62
RGPD1-201ENST00000398193 EPRSP07814 1512 aaKnown RBP11.14□□□□□ -0.63
RGPD1-201ENST00000398193 RANGAP1P46060 587 aaPredicted RBP11.13□□□□□ -0.63
RGPD1-201ENST00000398193 TCOF1Q13428 1488 aaKnown RBP11.13□□□□□ -0.63
RGPD1-201ENST00000398193 CHD1O14646 1710 aa11.12□□□□□ -0.63
RGPD1-201ENST00000398193 ABCA8O94911 1581 aa11.11□□□□□ -0.63
RGPD1-201ENST00000398193 CHMP7Q8WUX9 453 aaPredicted RBP11.1□□□□□ -0.63
RGPD1-201ENST00000398193 ACIN1Q9UKV3 1341 aaKnown RBP11.1□□□□□ -0.63
RGPD1-201ENST00000398193 MIA2Q96PC5 1412 aa11.1□□□□□ -0.63
RGPD1-201ENST00000398193 NCOA2Q15596 1464 aa11.1□□□□□ -0.63
RGPD1-201ENST00000398193 MYOM3Q5VTT5 1437 aa11.09□□□□□ -0.63
RGPD1-201ENST00000398193 PHLDB1Q86UU1 1377 aa11.09□□□□□ -0.63
RGPD1-201ENST00000398193 FGD6Q6ZV73 1430 aa11.09□□□□□ -0.63
RGPD1-201ENST00000398193 MTUS2Q5JR59 1369 aa11.08□□□□□ -0.64
RGPD1-201ENST00000398193 ITSN2Q9NZM3 1697 aa11.07□□□□□ -0.64
RGPD1-201ENST00000398193 CLASP1Q7Z460 1538 aa11.07□□□□□ -0.64
RGPD1-201ENST00000398193 NUP153P49790 1475 aaKnown RBP11.07□□□□□ -0.64
RGPD1-201ENST00000398193 PTPN23Q9H3S7 1636 aa11.07□□□□□ -0.64
RGPD1-201ENST00000398193 AKNAQ7Z591 1439 aa11.07□□□□□ -0.64
RGPD1-201ENST00000398193 CCER1Q8TC90 406 aaPredicted RBP11.06□□□□□ -0.64
RGPD1-201ENST00000398193 MAGI3Q5TCQ9 1506 aa11.06□□□□□ -0.64
RGPD1-201ENST00000398193 P3H3Q8IVL6 736 aa11.04□□□□□ -0.64
RGPD1-201ENST00000398193 GCC2Q8IWJ2 1684 aa11.03□□□□□ -0.64
RGPD1-201ENST00000398193 SETD5Q9C0A6 1442 aa11.03□□□□□ -0.64
RGPD1-201ENST00000398193 CDK11AQ9UQ88 783 aaPredicted RBP11.01□□□□□ -0.65
RGPD1-201ENST00000398193 CDK13Q14004 1512 aaKnown RBP11.01□□□□□ -0.65
RGPD1-201ENST00000398193 TROQ12816 1431 aaPredicted RBP11.01□□□□□ -0.65
RGPD1-201ENST00000398193 TTBK1Q5TCY1 1321 aaPredicted RBP11.01□□□□□ -0.65
RGPD1-201ENST00000398193 UHRF1BP1LA0JNW5 1464 aa11□□□□□ -0.65
RGPD1-201ENST00000398193 JPH4Q96JJ6 628 aa11□□□□□ -0.65
RGPD1-201ENST00000398193 DHX57Q6P158 1386 aaKnown RBP10.99□□□□□ -0.65
RGPD1-201ENST00000398193 KIF14Q15058 1648 aa10.99□□□□□ -0.65
RGPD1-201ENST00000398193 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.99□□□□□ -0.65
RGPD1-201ENST00000398193 DNMT1P26358 1616 aaKnown RBP10.99□□□□□ -0.65
RGPD1-201ENST00000398193 HFM1A2PYH4 1435 aa10.99□□□□□ -0.65
RGPD1-201ENST00000398193 HNRNPUL2Q1KMD3 747 aaKnown RBP10.98□□□□□ -0.65
RGPD1-201ENST00000398193 PRG4Q92954 1404 aaPredicted RBP10.98□□□□□ -0.65
RGPD1-201ENST00000398193 CROCC2H7BZ55 1655 aa10.97□□□□□ -0.65
RGPD1-201ENST00000398193 ADGBQ8N7X0 1667 aa10.97□□□□□ -0.65
RGPD1-201ENST00000398193 ROCK1Q13464 1354 aa10.96□□□□□ -0.65
RGPD1-201ENST00000398193 ABCC2Q92887 1545 aa10.95□□□□□ -0.66
RGPD1-201ENST00000398193 ATP1B4Q9UN42 357 aaPredicted RBP10.95□□□□□ -0.66
RGPD1-201ENST00000398193 RAB3GAP2Q9H2M9 1393 aa10.94□□□□□ -0.66
RGPD1-201ENST00000398193 PLB1Q6P1J6 1458 aa10.94□□□□□ -0.66
RGPD1-201ENST00000398193 UACAQ9BZF9 1416 aa10.93□□□□□ -0.66
RGPD1-201ENST00000398193 SHANK2Q9UPX8 1470 aa10.93□□□□□ -0.66
RGPD1-201ENST00000398193 ABCC10Q5T3U5 1492 aa10.93□□□□□ -0.66
RGPD1-201ENST00000398193 PTPRGP23470 1445 aa10.93□□□□□ -0.66
RGPD1-201ENST00000398193 ARHGEF5Q12774 1597 aa10.92□□□□□ -0.66
RGPD1-201ENST00000398193 ATP10BO94823 1461 aa10.92□□□□□ -0.66
RGPD1-201ENST00000398193 ADGRL2O95490 1459 aa10.92□□□□□ -0.66
RGPD1-201ENST00000398193 TIMELESSQ9UNS1 1208 aa10.92□□□□□ -0.66
RGPD1-201ENST00000398193 MAPKBP1O60336 1514 aa10.92□□□□□ -0.66
RGPD1-201ENST00000398193 PREX2Q70Z35 1606 aa10.91□□□□□ -0.66
RGPD1-201ENST00000398193 CDC42BPAQ5VT25 1732 aa10.9□□□□□ -0.66
RGPD1-201ENST00000398193 FBLN2P98095 1184 aa10.9□□□□□ -0.66
RGPD1-201ENST00000398193 FAM50AQ14320 339 aaKnown RBP10.9□□□□□ -0.66
RGPD1-201ENST00000398193 DAPK1P53355 1430 aa10.9□□□□□ -0.67
RGPD1-201ENST00000398193 GPATCH8Q9UKJ3 1502 aaKnown RBP10.89□□□□□ -0.67
RGPD1-201ENST00000398193 CAMSAP2Q08AD1 1489 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms