RNA–Protein interactions for RNA: ENST00000398035.6

COLCA2-201, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-201ENST00000398035 KIAA0586Q9BVV6 1533 aa31.52■■■□□ 2.64
COLCA2-201ENST00000398035 RAPGEF2Q9Y4G8 1499 aa31.49■■■□□ 2.63
COLCA2-201ENST00000398035 CSRNP3Q8WYN3 585 aa31.45■■■□□ 2.63
COLCA2-201ENST00000398035 PRG4Q92954 1404 aaPredicted RBP31.44■■■□□ 2.62
COLCA2-201ENST00000398035 EEA1Q15075 1411 aa31.42■■■□□ 2.62
COLCA2-201ENST00000398035 SHROOM2Q13796 1616 aa31.4■■■□□ 2.62
COLCA2-201ENST00000398035 PRXQ9BXM0 1461 aa31.35■■■□□ 2.61
COLCA2-201ENST00000398035 ERCC6L2Q5T890 1561 aa31.28■■■□□ 2.6
COLCA2-201ENST00000398035 CARMIL2Q6F5E8 1435 aa31.24■■■□□ 2.59
COLCA2-201ENST00000398035 FAM9AQ8IZU1 332 aaPredicted RBP31.23■■■□□ 2.59
COLCA2-201ENST00000398035 IQGAP2Q13576 1575 aa31.2■■■□□ 2.58
COLCA2-201ENST00000398035 TNIKQ9UKE5 1360 aa31.12■■■□□ 2.57
COLCA2-201ENST00000398035 PTPRGP23470 1445 aa31.12■■■□□ 2.57
COLCA2-201ENST00000398035 UGGT2Q9NYU1 1516 aa31.07■■■□□ 2.57
COLCA2-201ENST00000398035 NPM1P06748 294 aaKnown RBP eCLIP31.07■■■□□ 2.57
COLCA2-201ENST00000398035 TRHP20396 242 aaPredicted RBP31.07■■■□□ 2.57
COLCA2-201ENST00000398035 DISP1Q96F81 1524 aa31.01■■■□□ 2.56
COLCA2-201ENST00000398035 GOLGA3Q08378 1498 aa31.01■■■□□ 2.55
COLCA2-201ENST00000398035 TTBK1Q5TCY1 1321 aaPredicted RBP31■■■□□ 2.55
COLCA2-201ENST00000398035 CTTNBP2Q8WZ74 1663 aa30.91■■■□□ 2.54
COLCA2-201ENST00000398035 KIF21BO75037 1637 aa30.89■■■□□ 2.54
COLCA2-201ENST00000398035 UBTFP17480 764 aaKnown RBP30.89■■■□□ 2.53
COLCA2-201ENST00000398035 UACAQ9BZF9 1416 aa30.87■■■□□ 2.53
COLCA2-201ENST00000398035 KIAA0556O60303 1618 aa30.87■■■□□ 2.53
COLCA2-201ENST00000398035 UHRF1BP1LA0JNW5 1464 aa30.82■■■□□ 2.52
COLCA2-201ENST00000398035 P3H3Q8IVL6 736 aa30.78■■■□□ 2.52
COLCA2-201ENST00000398035 ADCY10Q96PN6 1610 aa30.78■■■□□ 2.52
COLCA2-201ENST00000398035 EHMT2Q96KQ7 1210 aa30.76■■■□□ 2.51
COLCA2-201ENST00000398035 ABCC2Q92887 1545 aa30.76■■■□□ 2.51
COLCA2-201ENST00000398035 RANGAP1P46060 587 aaPredicted RBP30.75■■■□□ 2.51
COLCA2-201ENST00000398035 MAPKBP1O60336 1514 aa30.71■■■□□ 2.51
COLCA2-201ENST00000398035 FAM69CQ0P6D2 419 aa30.67■■■□□ 2.5
COLCA2-201ENST00000398035 KDM5BQ9UGL1 1544 aa30.65■■■□□ 2.5
COLCA2-201ENST00000398035 PLB1Q6P1J6 1458 aa30.64■■■□□ 2.5
COLCA2-201ENST00000398035 ABCC10Q5T3U5 1492 aa30.64■■■□□ 2.49
COLCA2-201ENST00000398035 SAMD9Q5K651 1589 aa30.63■■■□□ 2.49
COLCA2-201ENST00000398035 EFCAB5A4FU69 1503 aa30.59■■■□□ 2.49
COLCA2-201ENST00000398035 ASXL2Q76L83 1435 aa30.58■■■□□ 2.49
COLCA2-201ENST00000398035 ABCA8O94911 1581 aa30.57■■■□□ 2.48
COLCA2-201ENST00000398035 FHOD3Q2V2M9 1422 aa30.53■■■□□ 2.48
COLCA2-201ENST00000398035 DIP2BQ9P265 1576 aa30.43■■■□□ 2.46
COLCA2-201ENST00000398035 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.42■■■□□ 2.46
COLCA2-201ENST00000398035 HNRNPUL2Q1KMD3 747 aaKnown RBP30.42■■■□□ 2.46
COLCA2-201ENST00000398035 FMN1Q68DA7 1419 aa30.42■■■□□ 2.46
COLCA2-201ENST00000398035 ARHGAP35Q9NRY4 1499 aa30.42■■■□□ 2.46
COLCA2-201ENST00000398035 ZCCHC11Q5TAX3 1644 aaKnown RBP30.41■■■□□ 2.46
COLCA2-201ENST00000398035 ATP10BO94823 1461 aa30.41■■■□□ 2.46
COLCA2-201ENST00000398035 WDR7Q9Y4E6 1490 aa30.4■■■□□ 2.46
COLCA2-201ENST00000398035 ARID3CA6NKF2 412 aa30.39■■■□□ 2.46
COLCA2-201ENST00000398035 EPRSP07814 1512 aaKnown RBP30.37■■■□□ 2.45
COLCA2-201ENST00000398035 KCNH8Q96L42 1107 aa30.37■■■□□ 2.45
COLCA2-201ENST00000398035 RAPGEF6Q8TEU7 1601 aa30.36■■■□□ 2.45
COLCA2-201ENST00000398035 GLI2P10070 1586 aa30.36■■■□□ 2.45
COLCA2-201ENST00000398035 KIF13AQ9H1H9 1805 aa30.34■■■□□ 2.45
COLCA2-201ENST00000398035 NUP153P49790 1475 aaKnown RBP30.33■■■□□ 2.45
COLCA2-201ENST00000398035 PLEKHD1A6NEE1 506 aa30.32■■■□□ 2.44
COLCA2-201ENST00000398035 ATP1B4Q9UN42 357 aaPredicted RBP30.3■■■□□ 2.44
COLCA2-201ENST00000398035 CLIP1P30622 1438 aa30.29■■■□□ 2.44
COLCA2-201ENST00000398035 CDK11AQ9UQ88 783 aaPredicted RBP30.24■■■□□ 2.43
COLCA2-201ENST00000398035 LOC105371045A0A1W2PR82 267 aa30.21■■■□□ 2.43
COLCA2-201ENST00000398035 CD109Q6YHK3 1445 aa30.2■■■□□ 2.42
COLCA2-201ENST00000398035 TEX14Q8IWB6 1497 aa30.17■■■□□ 2.42
COLCA2-201ENST00000398035 CASKIN1Q8WXD9 1431 aa30.12■■■□□ 2.41
COLCA2-201ENST00000398035 HECW1Q76N89 1606 aa30.1■■■□□ 2.41
COLCA2-201ENST00000398035 MAP3K4Q9Y6R4 1608 aa30.1■■■□□ 2.41
COLCA2-201ENST00000398035 CEP162Q5TB80 1403 aa30.1■■■□□ 2.41
COLCA2-201ENST00000398035 MAGI3Q5TCQ9 1506 aa30.09■■■□□ 2.41
COLCA2-201ENST00000398035 CDK13Q14004 1512 aaKnown RBP30.03■■■□□ 2.4
COLCA2-201ENST00000398035 PHLDB1Q86UU1 1377 aa30.03■■■□□ 2.4
COLCA2-201ENST00000398035 TSPOAP1O95153 1857 aa30.03■■■□□ 2.4
COLCA2-201ENST00000398035 CFAP43Q8NDM7 1665 aa30.02■■■□□ 2.4
COLCA2-201ENST00000398035 CCDC18Q5T9S5 1454 aa30■■■□□ 2.39
COLCA2-201ENST00000398035 FYCO1Q9BQS8 1478 aa30■■■□□ 2.39
COLCA2-201ENST00000398035 KDM6BO15054 1643 aa29.98■■■□□ 2.39
COLCA2-201ENST00000398035 ABCA9Q8IUA7 1624 aa29.98■■■□□ 2.39
COLCA2-201ENST00000398035 PPRC1Q5VV67 1664 aaKnown RBP29.96■■■□□ 2.39
COLCA2-201ENST00000398035 TROQ12816 1431 aaPredicted RBP29.94■■■□□ 2.38
COLCA2-201ENST00000398035 PCF11O94913 1555 aaKnown RBP29.91■■■□□ 2.38
COLCA2-201ENST00000398035 COL17A1Q9UMD9 1497 aaPredicted RBP29.89■■■□□ 2.38
COLCA2-201ENST00000398035 NEO1Q92859 1461 aa29.88■■■□□ 2.37
COLCA2-201ENST00000398035 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.87■■■□□ 2.37
COLCA2-201ENST00000398035 ARAP3Q8WWN8 1544 aa29.84■■■□□ 2.37
COLCA2-201ENST00000398035 PLCH2O75038 1416 aa29.84■■■□□ 2.37
COLCA2-201ENST00000398035 EFCAB2Q5VUJ9 269 aa29.82■■■□□ 2.36
COLCA2-201ENST00000398035 FANCAO15360 1455 aa29.78■■■□□ 2.36
COLCA2-201ENST00000398035 VPS8Q8N3P4 1428 aa29.77■■■□□ 2.36
COLCA2-201ENST00000398035 AKNAQ7Z591 1439 aa29.76■■■□□ 2.36
COLCA2-201ENST00000398035 KIF14Q15058 1648 aa29.75■■■□□ 2.35
COLCA2-201ENST00000398035 MTUS2Q5JR59 1369 aa29.75■■■□□ 2.35
COLCA2-201ENST00000398035 TTC37Q6PGP7 1564 aa29.73■■■□□ 2.35
COLCA2-201ENST00000398035 RAPGEF3O95398 923 aa29.73■■■□□ 2.35
COLCA2-201ENST00000398035 LRRIQ1Q96JM4 1722 aa29.7■■■□□ 2.35
COLCA2-201ENST00000398035 DENND4BO75064 1496 aaPredicted RBP29.68■■■□□ 2.34
COLCA2-201ENST00000398035 CFAP74Q9C0B2 1584 aa29.66■■■□□ 2.34
COLCA2-201ENST00000398035 APLP2Q06481 763 aa29.63■■■□□ 2.33
COLCA2-201ENST00000398035 SCAPERQ9BY12 1400 aa29.63■■■□□ 2.33
COLCA2-201ENST00000398035 ADGRL1O94910 1474 aa29.61■■■□□ 2.33
COLCA2-201ENST00000398035 CCNB3Q8WWL7 1395 aa29.6■■■□□ 2.33
COLCA2-201ENST00000398035 ARHGAP5Q13017 1502 aa29.6■■■□□ 2.33
COLCA2-201ENST00000398035 AEBP2Q6ZN18 517 aaPredicted RBP29.59■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms