RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 RUSC2Q8N2Y8 1516 aa22.41■■□□□ 1.18
SEC13-209ENST00000397117 ABCC10Q5T3U5 1492 aa22.34■■□□□ 1.17
SEC13-209ENST00000397117 FAM69CQ0P6D2 419 aa22.32■■□□□ 1.16
SEC13-209ENST00000397117 NPM1P06748 294 aaKnown RBP eCLIP22.31■■□□□ 1.16
SEC13-209ENST00000397117 CHIC1Q5VXU3 224 aa22.31■■□□□ 1.16
SEC13-209ENST00000397117 MAPKBP1O60336 1514 aa22.31■■□□□ 1.16
SEC13-209ENST00000397117 ADCY10Q96PN6 1610 aa22.3■■□□□ 1.16
SEC13-209ENST00000397117 IGF1RP08069 1367 aa22.29■■□□□ 1.16
SEC13-209ENST00000397117 KIAA0586Q9BVV6 1533 aa22.29■■□□□ 1.16
SEC13-209ENST00000397117 DIP2BQ9P265 1576 aa22.26■■□□□ 1.15
SEC13-209ENST00000397117 CUL7Q14999 1698 aa22.23■■□□□ 1.15
SEC13-209ENST00000397117 KIF27Q86VH2 1401 aa22.23■■□□□ 1.15
SEC13-209ENST00000397117 TSPOAP1O95153 1857 aa22.15■■□□□ 1.14
SEC13-209ENST00000397117 PTPRGP23470 1445 aa22.13■■□□□ 1.13
SEC13-209ENST00000397117 KDM6BO15054 1643 aa22.13■■□□□ 1.13
SEC13-209ENST00000397117 CARMIL1Q5VZK9 1371 aa22.12■■□□□ 1.13
SEC13-209ENST00000397117 KDM4FA0A1W2PPD8 638 aa22.08■■□□□ 1.13
SEC13-209ENST00000397117 TNIKQ9UKE5 1360 aa22.07■■□□□ 1.12
SEC13-209ENST00000397117 CARMIL2Q6F5E8 1435 aa22.05■■□□□ 1.12
SEC13-209ENST00000397117 ABCC2Q92887 1545 aa22.04■■□□□ 1.12
SEC13-209ENST00000397117 TTBK1Q5TCY1 1321 aaPredicted RBP22.03■■□□□ 1.12
SEC13-209ENST00000397117 IQGAP2Q13576 1575 aa22.01■■□□□ 1.11
SEC13-209ENST00000397117 UHRF1BP1LA0JNW5 1464 aa21.99■■□□□ 1.11
SEC13-209ENST00000397117 ASXL2Q76L83 1435 aa21.99■■□□□ 1.11
SEC13-209ENST00000397117 GLI2P10070 1586 aa21.99■■□□□ 1.11
SEC13-209ENST00000397117 PLB1Q6P1J6 1458 aa21.99■■□□□ 1.11
SEC13-209ENST00000397117 PPRC1Q5VV67 1664 aaKnown RBP21.98■■□□□ 1.11
SEC13-209ENST00000397117 DISP1Q96F81 1524 aa21.96■■□□□ 1.11
SEC13-209ENST00000397117 UACAQ9BZF9 1416 aa21.95■■□□□ 1.1
SEC13-209ENST00000397117 UGGT2Q9NYU1 1516 aa21.89■■□□□ 1.09
SEC13-209ENST00000397117 KDM5BQ9UGL1 1544 aa21.89■■□□□ 1.09
SEC13-209ENST00000397117 RAPGEF2Q9Y4G8 1499 aa21.87■■□□□ 1.09
SEC13-209ENST00000397117 EPRSP07814 1512 aaKnown RBP21.87■■□□□ 1.09
SEC13-209ENST00000397117 MAP3K4Q9Y6R4 1608 aa21.85■■□□□ 1.09
SEC13-209ENST00000397117 COL17A1Q9UMD9 1497 aaPredicted RBP21.85■■□□□ 1.09
SEC13-209ENST00000397117 ZCCHC11Q5TAX3 1644 aaKnown RBP21.83■■□□□ 1.09
SEC13-209ENST00000397117 KIAA0556O60303 1618 aa21.82■■□□□ 1.08
SEC13-209ENST00000397117 ADGRL1O94910 1474 aa21.79■■□□□ 1.08
SEC13-209ENST00000397117 TEX14Q8IWB6 1497 aa21.77■■□□□ 1.08
SEC13-209ENST00000397117 WDR7Q9Y4E6 1490 aa21.72■■□□□ 1.07
SEC13-209ENST00000397117 CTTNBP2Q8WZ74 1663 aa21.72■■□□□ 1.07
SEC13-209ENST00000397117 FAM9AQ8IZU1 332 aaPredicted RBP21.71■■□□□ 1.07
SEC13-209ENST00000397117 ABCA8O94911 1581 aa21.67■■□□□ 1.06
SEC13-209ENST00000397117 GOLGA3Q08378 1498 aa21.66■■□□□ 1.06
SEC13-209ENST00000397117 ILDR1Q86SU0 546 aaPredicted RBP21.66■■□□□ 1.06
SEC13-209ENST00000397117 EEA1Q15075 1411 aa21.65■■□□□ 1.06
SEC13-209ENST00000397117 MAGI3Q5TCQ9 1506 aa21.65■■□□□ 1.06
SEC13-209ENST00000397117 CFAP43Q8NDM7 1665 aa21.64■■□□□ 1.06
SEC13-209ENST00000397117 CD109Q6YHK3 1445 aa21.64■■□□□ 1.05
SEC13-209ENST00000397117 KCNH8Q96L42 1107 aa21.62■■□□□ 1.05
SEC13-209ENST00000397117 PRXQ9BXM0 1461 aa21.6■■□□□ 1.05
SEC13-209ENST00000397117 HECW2Q9P2P5 1572 aa21.58■■□□□ 1.04
SEC13-209ENST00000397117 CSRNP3Q8WYN3 585 aa21.55■■□□□ 1.04
SEC13-209ENST00000397117 ARAP3Q8WWN8 1544 aa21.5■■□□□ 1.03
SEC13-209ENST00000397117 ATP10BO94823 1461 aa21.49■■□□□ 1.03
SEC13-209ENST00000397117 KIF21BO75037 1637 aa21.47■■□□□ 1.03
SEC13-209ENST00000397117 P3H3Q8IVL6 736 aa21.46■■□□□ 1.03
SEC13-209ENST00000397117 LOC105371045A0A1W2PR82 267 aa21.44■■□□□ 1.02
SEC13-209ENST00000397117 ARID3CA6NKF2 412 aa21.44■■□□□ 1.02
SEC13-209ENST00000397117 ABCA9Q8IUA7 1624 aa21.43■■□□□ 1.02
SEC13-209ENST00000397117 EHMT2Q96KQ7 1210 aa21.41■■□□□ 1.02
SEC13-209ENST00000397117 PHLDB1Q86UU1 1377 aa21.41■■□□□ 1.02
SEC13-209ENST00000397117 SAMD9Q5K651 1589 aa21.4■■□□□ 1.02
SEC13-209ENST00000397117 RAPGEF6Q8TEU7 1601 aa21.36■■□□□ 1.01
SEC13-209ENST00000397117 ADAMTSL3P82987 1691 aa21.35■■□□□ 1.01
SEC13-209ENST00000397117 RAPGEF3O95398 923 aa21.34■■□□□ 1.01
SEC13-209ENST00000397117 NEO1Q92859 1461 aa21.34■■□□□ 1.01
SEC13-209ENST00000397117 PTPRMP28827 1452 aa21.3■■□□□ 1
SEC13-209ENST00000397117 NUP153P49790 1475 aaKnown RBP21.29■■□□□ 1
SEC13-209ENST00000397117 FRMPD1Q5SYB0 1578 aa21.28■■□□□ 1
SEC13-209ENST00000397117 UBTFP17480 764 aaKnown RBP21.28■■□□□ 1
SEC13-209ENST00000397117 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.27■■□□□ 1
SEC13-209ENST00000397117 HNRNPUL2Q1KMD3 747 aaKnown RBP21.27■■□□□ 1
SEC13-209ENST00000397117 BCORL1Q5H9F3 1711 aa21.26■□□□□ 0.99
SEC13-209ENST00000397117 FHOD3Q2V2M9 1422 aa21.22■□□□□ 0.99
SEC13-209ENST00000397117 MADDQ8WXG6 1647 aa21.2■□□□□ 0.98
SEC13-209ENST00000397117 PLEKHD1A6NEE1 506 aa21.2■□□□□ 0.98
SEC13-209ENST00000397117 RICTORQ6R327 1708 aa21.2■□□□□ 0.98
SEC13-209ENST00000397117 ARID4BQ4LE39 1312 aaPredicted RBP21.19■□□□□ 0.98
SEC13-209ENST00000397117 RANGAP1P46060 587 aaPredicted RBP21.19■□□□□ 0.98
SEC13-209ENST00000397117 FBXO41Q8TF61 875 aa21.19■□□□□ 0.98
SEC13-209ENST00000397117 DENND4BO75064 1496 aaPredicted RBP21.17■□□□□ 0.98
SEC13-209ENST00000397117 AKNAQ7Z591 1439 aa21.17■□□□□ 0.98
SEC13-209ENST00000397117 ARHGEF40Q8TER5 1519 aa21.16■□□□□ 0.98
SEC13-209ENST00000397117 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.15■□□□□ 0.984e-7■■■■□ 22.2
SEC13-209ENST00000397117 PCF11O94913 1555 aaKnown RBP21.14■□□□□ 0.97
SEC13-209ENST00000397117 FANCAO15360 1455 aa21.13■□□□□ 0.97
SEC13-209ENST00000397117 CFAP74Q9C0B2 1584 aa21.13■□□□□ 0.97
SEC13-209ENST00000397117 LMTK3Q96Q04 1460 aa21.13■□□□□ 0.97
SEC13-209ENST00000397117 RIMS1Q86UR5 1692 aaKnown RBP21.12■□□□□ 0.97
SEC13-209ENST00000397117 EFCAB5A4FU69 1503 aa21.1■□□□□ 0.97
SEC13-209ENST00000397117 TTC37Q6PGP7 1564 aa21.1■□□□□ 0.97
SEC13-209ENST00000397117 ZMYM4Q5VZL5 1548 aa21.1■□□□□ 0.97
SEC13-209ENST00000397117 SIGLEC1Q9BZZ2 1709 aa21.07■□□□□ 0.96
SEC13-209ENST00000397117 YEATS2Q9ULM3 1422 aa21.05■□□□□ 0.96
SEC13-209ENST00000397117 ZFYVE16Q7Z3T8 1539 aa21.05■□□□□ 0.96
SEC13-209ENST00000397117 CEP162Q5TB80 1403 aa21.05■□□□□ 0.96
SEC13-209ENST00000397117 POGZQ7Z3K3 1410 aa21.05■□□□□ 0.96
SEC13-209ENST00000397117 MAGI2Q86UL8 1455 aa21.05■□□□□ 0.96
SEC13-209ENST00000397117 CDK13Q14004 1512 aaKnown RBP21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms