RNA–Protein interactions for RNA: ENST00000397012.6

PPARG-206, Transcript of peroxisome proliferator activated receptor gamma, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPARG, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARG-206ENST00000397012 MAGI1Q96QZ7 1491 aaPredicted RBP20.95■□□□□ 0.94
PPARG-206ENST00000397012 TRIM26Q12899 539 aaPredicted RBP20.94■□□□□ 0.94
PPARG-206ENST00000397012 EFCAB5A4FU69 1503 aa20.91■□□□□ 0.94
PPARG-206ENST00000397012 PCGF6Q9BYE7 350 aa20.88■□□□□ 0.93
PPARG-206ENST00000397012 SYNJ2O15056 1496 aa20.87■□□□□ 0.93
PPARG-206ENST00000397012 GRIN2AQ12879 1464 aa20.87■□□□□ 0.93
PPARG-206ENST00000397012 SAMD9Q5K651 1589 aa20.85■□□□□ 0.93
PPARG-206ENST00000397012 IQGAP2Q13576 1575 aa20.83■□□□□ 0.92
PPARG-206ENST00000397012 PPARGC1BQ86YN6 1023 aaKnown RBP20.82■□□□□ 0.92
PPARG-206ENST00000397012 KIAA0586Q9BVV6 1533 aa20.79■□□□□ 0.92
PPARG-206ENST00000397012 CHMP7Q8WUX9 453 aaPredicted RBP20.77■□□□□ 0.91
PPARG-206ENST00000397012 FHOD3Q2V2M9 1422 aa20.75■□□□□ 0.91
PPARG-206ENST00000397012 UGGT2Q9NYU1 1516 aa20.75■□□□□ 0.91
PPARG-206ENST00000397012 APLP2Q06481 763 aa20.75■□□□□ 0.91
PPARG-206ENST00000397012 CEP170Q5SW79 1584 aa20.74■□□□□ 0.91
PPARG-206ENST00000397012 NUP160Q12769 1436 aa20.74■□□□□ 0.91
PPARG-206ENST00000397012 P3H3Q8IVL6 736 aa20.72■□□□□ 0.91
PPARG-206ENST00000397012 MAP3K1Q13233 1512 aa20.71■□□□□ 0.91
PPARG-206ENST00000397012 FMN1Q68DA7 1419 aa20.7■□□□□ 0.9
PPARG-206ENST00000397012 PCF11O94913 1555 aaKnown RBP20.69■□□□□ 0.9
PPARG-206ENST00000397012 FYCO1Q9BQS8 1478 aa20.67■□□□□ 0.9
PPARG-206ENST00000397012 CASKIN1Q8WXD9 1431 aa20.67■□□□□ 0.9
PPARG-206ENST00000397012 FBLN2P98095 1184 aa20.66■□□□□ 0.9
PPARG-206ENST00000397012 CHD1O14646 1710 aa20.64■□□□□ 0.9
PPARG-206ENST00000397012 TIAM1Q13009 1591 aa20.64■□□□□ 0.9
PPARG-206ENST00000397012 DISP1Q96F81 1524 aa20.63■□□□□ 0.89
PPARG-206ENST00000397012 KIAA0556O60303 1618 aa20.62■□□□□ 0.89
PPARG-206ENST00000397012 CFAP43Q8NDM7 1665 aa20.62■□□□□ 0.89
PPARG-206ENST00000397012 TTBK1Q5TCY1 1321 aaPredicted RBP20.61■□□□□ 0.89
PPARG-206ENST00000397012 KANK4Q5T7N3 995 aaPredicted RBP20.61■□□□□ 0.89
PPARG-206ENST00000397012 JPH4Q96JJ6 628 aa20.54■□□□□ 0.88
PPARG-206ENST00000397012 LRRIQ1Q96JM4 1722 aa20.54■□□□□ 0.88
PPARG-206ENST00000397012 LRRC9Q6ZRR7 1453 aa20.54■□□□□ 0.88
PPARG-206ENST00000397012 CARMIL2Q6F5E8 1435 aa20.5■□□□□ 0.87
PPARG-206ENST00000397012 HECW1Q76N89 1606 aa20.49■□□□□ 0.87
PPARG-206ENST00000397012 ATP1B4Q9UN42 357 aaPredicted RBP20.48■□□□□ 0.87
PPARG-206ENST00000397012 SHROOM2Q13796 1616 aa20.47■□□□□ 0.87
PPARG-206ENST00000397012 CCDC18Q5T9S5 1454 aa20.46■□□□□ 0.87
PPARG-206ENST00000397012 RRBP1Q9P2E9 1410 aaKnown RBP20.43■□□□□ 0.86
PPARG-206ENST00000397012 RAPGEF6Q8TEU7 1601 aa20.42■□□□□ 0.86
PPARG-206ENST00000397012 CLASP1Q7Z460 1538 aa20.42■□□□□ 0.86
PPARG-206ENST00000397012 EPRSP07814 1512 aaKnown RBP20.41■□□□□ 0.86
PPARG-206ENST00000397012 PRG4Q92954 1404 aaPredicted RBP20.4■□□□□ 0.86
PPARG-206ENST00000397012 NUP153P49790 1475 aaKnown RBP20.37■□□□□ 0.85
PPARG-206ENST00000397012 EHBP1L1Q8N3D4 1523 aa20.36■□□□□ 0.85
PPARG-206ENST00000397012 MTUS2Q5JR59 1369 aa20.35■□□□□ 0.85
PPARG-206ENST00000397012 PHLDB1Q86UU1 1377 aa20.34■□□□□ 0.85
PPARG-206ENST00000397012 MAGI3Q5TCQ9 1506 aa20.34■□□□□ 0.85
PPARG-206ENST00000397012 PLB1Q6P1J6 1458 aa20.33■□□□□ 0.85
PPARG-206ENST00000397012 ABCA8O94911 1581 aa20.33■□□□□ 0.85
PPARG-206ENST00000397012 HRCP23327 699 aa20.33■□□□□ 0.85
PPARG-206ENST00000397012 CDK13Q14004 1512 aaKnown RBP20.33■□□□□ 0.85
PPARG-206ENST00000397012 CCNB3Q8WWL7 1395 aa20.32■□□□□ 0.84
PPARG-206ENST00000397012 SUPT6HQ7KZ85 1726 aaKnown RBP20.31■□□□□ 0.84
PPARG-206ENST00000397012 ARHGEF11O15085 1522 aa20.29■□□□□ 0.84
PPARG-206ENST00000397012 PTPRGP23470 1445 aa20.28■□□□□ 0.84
PPARG-206ENST00000397012 NCOA2Q15596 1464 aa20.27■□□□□ 0.84
PPARG-206ENST00000397012 ERCC6L2Q5T890 1561 aa20.27■□□□□ 0.83
PPARG-206ENST00000397012 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.24■□□□□ 0.83
PPARG-206ENST00000397012 HNRNPUL2Q1KMD3 747 aaKnown RBP20.23■□□□□ 0.83
PPARG-206ENST00000397012 CDK11AQ9UQ88 783 aaPredicted RBP20.2■□□□□ 0.82
PPARG-206ENST00000397012 MYOM3Q5VTT5 1437 aa20.2■□□□□ 0.82
PPARG-206ENST00000397012 FGD6Q6ZV73 1430 aa20.2■□□□□ 0.82
PPARG-206ENST00000397012 ATP10BO94823 1461 aa20.19■□□□□ 0.82
PPARG-206ENST00000397012 ARID3CA6NKF2 412 aa20.19■□□□□ 0.82
PPARG-206ENST00000397012 UACAQ9BZF9 1416 aa20.18■□□□□ 0.82
PPARG-206ENST00000397012 TROQ12816 1431 aaPredicted RBP20.17■□□□□ 0.82
PPARG-206ENST00000397012 OSCARQ8IYS5 282 aa20.16■□□□□ 0.82
PPARG-206ENST00000397012 ADCY10Q96PN6 1610 aa20.16■□□□□ 0.82
PPARG-206ENST00000397012 ABCC2Q92887 1545 aa20.13■□□□□ 0.81
PPARG-206ENST00000397012 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.13■□□□□ 0.81
PPARG-206ENST00000397012 MIA2Q96PC5 1412 aa20.11■□□□□ 0.81
PPARG-206ENST00000397012 UHRF1BP1LA0JNW5 1464 aa20.1■□□□□ 0.81
PPARG-206ENST00000397012 PTPN23Q9H3S7 1636 aa20.1■□□□□ 0.81
PPARG-206ENST00000397012 TCOF1Q13428 1488 aaKnown RBP20.1■□□□□ 0.81
PPARG-206ENST00000397012 ZEB1P37275 1124 aaPredicted RBP20.1■□□□□ 0.81
PPARG-206ENST00000397012 FAM50AQ14320 339 aaKnown RBP20.1■□□□□ 0.81
PPARG-206ENST00000397012 PLEKHD1A6NEE1 506 aa20.07■□□□□ 0.8
PPARG-206ENST00000397012 KIF14Q15058 1648 aa20.07■□□□□ 0.8
PPARG-206ENST00000397012 CCER1Q8TC90 406 aaPredicted RBP20.05■□□□□ 0.8
PPARG-206ENST00000397012 ITSN2Q9NZM3 1697 aa20.03■□□□□ 0.8
PPARG-206ENST00000397012 ITGAEP38570 1179 aa20.03■□□□□ 0.8
PPARG-206ENST00000397012 KDM5BQ9UGL1 1544 aa20.02■□□□□ 0.8
PPARG-206ENST00000397012 ABCC10Q5T3U5 1492 aa20.01■□□□□ 0.79
PPARG-206ENST00000397012 GPATCH8Q9UKJ3 1502 aaKnown RBP20■□□□□ 0.79
PPARG-206ENST00000397012 ZCCHC11Q5TAX3 1644 aaKnown RBP20■□□□□ 0.79
PPARG-206ENST00000397012 PTPRKQ15262 1439 aa19.98■□□□□ 0.79
PPARG-206ENST00000397012 CDC42BPAQ5VT25 1732 aa19.97■□□□□ 0.79
PPARG-206ENST00000397012 SETD5Q9C0A6 1442 aa19.97■□□□□ 0.79
PPARG-206ENST00000397012 RAB3GAP2Q9H2M9 1393 aa19.93■□□□□ 0.78
PPARG-206ENST00000397012 DNMT1P26358 1616 aaKnown RBP19.91■□□□□ 0.78
PPARG-206ENST00000397012 HFM1A2PYH4 1435 aa19.9■□□□□ 0.78
PPARG-206ENST00000397012 DHX57Q6P158 1386 aaKnown RBP19.9■□□□□ 0.78
PPARG-206ENST00000397012 CFDP1Q9UEE9 299 aaPredicted RBP19.9■□□□□ 0.78
PPARG-206ENST00000397012 CAMSAP2Q08AD1 1489 aa19.89■□□□□ 0.78
PPARG-206ENST00000397012 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.88■□□□□ 0.77
PPARG-206ENST00000397012 AKNAQ7Z591 1439 aa19.88■□□□□ 0.77
PPARG-206ENST00000397012 PREX2Q70Z35 1606 aa19.88■□□□□ 0.77
PPARG-206ENST00000397012 ZNF644Q9H582 1327 aaPredicted RBP19.88■□□□□ 0.77
PPARG-206ENST00000397012 CDC42BPBQ9Y5S2 1711 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms