RNA–Protein interactions for RNA: ENST00000396987.7

GPAT4-201, Transcript of glycerol-3-phosphate acyltransferase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPAT4, Length 6,298 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPAT4-201ENST00000396987 NRDCO43847 1150 aa18.96■□□□□ 0.63
GPAT4-201ENST00000396987 FAM50AQ14320 339 aaKnown RBP18.95■□□□□ 0.62
GPAT4-201ENST00000396987 TAF7LQ5H9L4 462 aa18.94■□□□□ 0.62
GPAT4-201ENST00000396987 BECN1Q14457 450 aa18.94■□□□□ 0.62
GPAT4-201ENST00000396987 L1TD1Q5T7N2 865 aaKnown RBP18.93■□□□□ 0.62
GPAT4-201ENST00000396987 CCDC136Q96JN2 1154 aa18.93■□□□□ 0.62
GPAT4-201ENST00000396987 MYH16Q9H6N6 1097 aa18.9■□□□□ 0.62
GPAT4-201ENST00000396987 SETQ01105 290 aaPredicted RBP18.9■□□□□ 0.62
GPAT4-201ENST00000396987 SCAF1Q9H7N4 1312 aaKnown RBP18.9■□□□□ 0.62
GPAT4-201ENST00000396987 GOLGA6L1Q8N7Z2 621 aa18.87■□□□□ 0.61
GPAT4-201ENST00000396987 PTMSP20962 102 aa18.86■□□□□ 0.61
GPAT4-201ENST00000396987 MEX3CQ5U5Q3 659 aaKnown RBP18.84■□□□□ 0.61
GPAT4-201ENST00000396987 DRC7Q8IY82 874 aa18.84■□□□□ 0.61
GPAT4-201ENST00000396987 FBLN2P98095 1184 aa18.83■□□□□ 0.61
GPAT4-201ENST00000396987 KIAA2012Q0VF49 1180 aa18.83■□□□□ 0.61
GPAT4-201ENST00000396987 MSNP26038 577 aaKnown RBP18.83■□□□□ 0.6
GPAT4-201ENST00000396987 DDRGK1Q96HY6 314 aa18.82■□□□□ 0.6
GPAT4-201ENST00000396987 KRI1Q8N9T8 703 aaKnown RBP18.82■□□□□ 0.6
GPAT4-201ENST00000396987 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.8■□□□□ 0.6
GPAT4-201ENST00000396987 ANO8Q9HCE9 1232 aaPredicted RBP18.79■□□□□ 0.6
GPAT4-201ENST00000396987 PLPPR3Q6T4P5 718 aa18.73■□□□□ 0.59
GPAT4-201ENST00000396987 NAP1L2Q9ULW6 460 aaPredicted RBP18.72■□□□□ 0.59
GPAT4-201ENST00000396987 STK11IPQ8N1F8 1099 aa18.7■□□□□ 0.58
GPAT4-201ENST00000396987 FAM9BQ8IZU0 186 aa18.7■□□□□ 0.58
GPAT4-201ENST00000396987 LAS1LQ9Y4W2 734 aaKnown RBP18.7■□□□□ 0.58
GPAT4-201ENST00000396987 HNRNPUQ00839 825 aaKnown RBP eCLIP18.69■□□□□ 0.58
GPAT4-201ENST00000396987 GOLGA6L4A6NEF3 574 aa18.69■□□□□ 0.58
GPAT4-201ENST00000396987 RRP12Q5JTH9 1297 aaKnown RBP18.69■□□□□ 0.58
GPAT4-201ENST00000396987 PLEKHG5O94827 1062 aa18.66■□□□□ 0.58
GPAT4-201ENST00000396987 IRX6P78412 446 aaPredicted RBP18.64■□□□□ 0.58
GPAT4-201ENST00000396987 CASC1Q6TDU7 716 aa18.63■□□□□ 0.57
GPAT4-201ENST00000396987 FGD1P98174 961 aa18.63■□□□□ 0.57
GPAT4-201ENST00000396987 ISY1Q9ULR0 285 aaKnown RBP18.61■□□□□ 0.57
GPAT4-201ENST00000396987 P3H3Q8IVL6 736 aa18.57■□□□□ 0.56
GPAT4-201ENST00000396987 PPM1GO15355 546 aaPredicted RBP18.56■□□□□ 0.56
GPAT4-201ENST00000396987 ARID3CA6NKF2 412 aa18.56■□□□□ 0.56
GPAT4-201ENST00000396987 SCRIBQ14160 1630 aa18.55■□□□□ 0.56
GPAT4-201ENST00000396987 WDR43Q15061 677 aaKnown RBP eCLIP18.55■□□□□ 0.56
GPAT4-201ENST00000396987 HSP90AB1P08238 724 aaKnown RBP18.53■□□□□ 0.56
GPAT4-201ENST00000396987 WWC1Q8IX03 1113 aa18.52■□□□□ 0.56
GPAT4-201ENST00000396987 NPHP1O15259 732 aa18.51■□□□□ 0.55
GPAT4-201ENST00000396987 VSIG10Q8N0Z9 540 aa18.5■□□□□ 0.55
GPAT4-201ENST00000396987 STAG3Q9UJ98 1225 aa18.49■□□□□ 0.55
GPAT4-201ENST00000396987 CEP89Q96ST8 783 aa18.48■□□□□ 0.55
GPAT4-201ENST00000396987 CHGAP10645 457 aaKnown RBP18.48■□□□□ 0.55
GPAT4-201ENST00000396987 USP35Q9P2H5 1018 aa18.47■□□□□ 0.55
GPAT4-201ENST00000396987 CSRNP3Q8WYN3 585 aa18.47■□□□□ 0.55
GPAT4-201ENST00000396987 KCNJ4P48050 445 aa18.45■□□□□ 0.54
GPAT4-201ENST00000396987 PLCD4Q9BRC7 762 aa18.44■□□□□ 0.54
GPAT4-201ENST00000396987 ESF1Q9H501 851 aaKnown RBP18.43■□□□□ 0.54
GPAT4-201ENST00000396987 GNL2Q13823 731 aaKnown RBP18.41■□□□□ 0.54
GPAT4-201ENST00000396987 ZNF771Q7L3S4 317 aaPredicted RBP18.41■□□□□ 0.54
GPAT4-201ENST00000396987 TMC1Q8TDI8 760 aa18.4■□□□□ 0.54
GPAT4-201ENST00000396987 GOLGA2Q08379 1002 aa18.39■□□□□ 0.53
GPAT4-201ENST00000396987 ZNF777Q9ULD5 760 aaPredicted RBP18.38■□□□□ 0.53
GPAT4-201ENST00000396987 CREBRFQ8IUR6 639 aa18.37■□□□□ 0.53
GPAT4-201ENST00000396987 SPRYD3Q8NCJ5 442 aa18.36■□□□□ 0.53
GPAT4-201ENST00000396987 C14orf37Q86TY3 774 aa18.36■□□□□ 0.53
GPAT4-201ENST00000396987 ZCCHC6Q5VYS8 1495 aaKnown RBP18.36■□□□□ 0.53
GPAT4-201ENST00000396987 DEKP35659 375 aaKnown RBP18.35■□□□□ 0.53
GPAT4-201ENST00000396987 HTATSF1O43719 755 aaKnown RBP18.35■□□□□ 0.53
GPAT4-201ENST00000396987 HSP90AA2PQ14568 343 aaPredicted RBP18.34■□□□□ 0.53
GPAT4-201ENST00000396987 MAP7D2Q96T17 732 aa18.33■□□□□ 0.53
GPAT4-201ENST00000396987 BCCIPQ9P287 314 aaKnown RBP eCLIP18.33■□□□□ 0.53
GPAT4-201ENST00000396987 OS9Q13438 667 aaPredicted RBP18.31■□□□□ 0.52
GPAT4-201ENST00000396987 NEFHP12036 1026 aa18.3■□□□□ 0.52
GPAT4-201ENST00000396987 TPM3P06753 285 aa18.3■□□□□ 0.52
GPAT4-201ENST00000396987 CCAR2Q8N163 923 aaKnown RBP18.29■□□□□ 0.52
GPAT4-201ENST00000396987 NOP58Q9Y2X3 529 aaKnown RBP18.28■□□□□ 0.52
GPAT4-201ENST00000396987 HSP90B1P14625 803 aaKnown RBP18.28■□□□□ 0.52
GPAT4-201ENST00000396987 HMMRO75330 724 aa18.26■□□□□ 0.51
GPAT4-201ENST00000396987 TPM4P67936 248 aa18.26■□□□□ 0.51
GPAT4-201ENST00000396987 GZF1Q9H116 711 aaPredicted RBP18.24■□□□□ 0.51
GPAT4-201ENST00000396987 RGS3P49796 1198 aa18.23■□□□□ 0.51
GPAT4-201ENST00000396987 HSP90AB3PQ58FF7 597 aa18.23■□□□□ 0.51
GPAT4-201ENST00000396987 HSCBQ8IWL3 235 aa18.23■□□□□ 0.51
GPAT4-201ENST00000396987 MIER1Q8N108 512 aa18.22■□□□□ 0.51
GPAT4-201ENST00000396987 CNKSR2Q8WXI2 1034 aa18.22■□□□□ 0.51
GPAT4-201ENST00000396987 HAP1P54257 671 aaPredicted RBP18.22■□□□□ 0.51
GPAT4-201ENST00000396987 CCDC180Q9P1Z9 1646 aa18.22■□□□□ 0.51
GPAT4-201ENST00000396987 FTSJ3Q8IY81 847 aaKnown RBP18.22■□□□□ 0.51
GPAT4-201ENST00000396987 CCDC191Q8NCU4 936 aa18.21■□□□□ 0.51
GPAT4-201ENST00000396987 PODXL2Q9NZ53 605 aa18.19■□□□□ 0.5
GPAT4-201ENST00000396987 GPS2Q13227 327 aa18.19■□□□□ 0.5
GPAT4-201ENST00000396987 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.19■□□□□ 0.5
GPAT4-201ENST00000396987 DCAF1Q9Y4B6 1507 aa18.19■□□□□ 0.5
GPAT4-201ENST00000396987 DDX10Q13206 875 aaKnown RBP18.19■□□□□ 0.5
GPAT4-201ENST00000396987 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.16■□□□□ 0.55e-7■■■■■ 77.2
GPAT4-201ENST00000396987 MRS2Q9HD23 443 aa18.16■□□□□ 0.5
GPAT4-201ENST00000396987 RASSF8Q8NHQ8 419 aa18.15■□□□□ 0.5
GPAT4-201ENST00000396987 NPM1P06748 294 aaKnown RBP eCLIP18.15■□□□□ 0.5
GPAT4-201ENST00000396987 SENP3-EIF4A1A0A087X0R7 540 aa18.15■□□□□ 0.5
GPAT4-201ENST00000396987 NOM1Q5C9Z4 860 aaKnown RBP18.15■□□□□ 0.5
GPAT4-201ENST00000396987 PES1O00541 588 aaKnown RBP18.15■□□□□ 0.5
GPAT4-201ENST00000396987 RDXP35241 583 aaKnown RBP18.14■□□□□ 0.49
GPAT4-201ENST00000396987 AK7Q96M32 723 aa18.14■□□□□ 0.49
GPAT4-201ENST00000396987 SENP3Q9H4L4 574 aaPredicted RBP18.13■□□□□ 0.49
GPAT4-201ENST00000396987 CCDC70Q6NSX1 233 aa18.11■□□□□ 0.49
GPAT4-201ENST00000396987 GOLGA6L3A6NEY3 463 aa18.1■□□□□ 0.49
GPAT4-201ENST00000396987 DHX37Q8IY37 1157 aaKnown RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms